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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30861
         (533 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_45236| Best HMM Match : PRP38 (HMM E-Value=0)                       31   0.59 
SB_43807| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.59 
SB_31407| Best HMM Match : TolA (HMM E-Value=2.5)                      31   0.78 
SB_43805| Best HMM Match : YscO (HMM E-Value=6)                        31   0.78 
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)                  30   1.4  
SB_23465| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.1e-07)           29   1.8  
SB_5806| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.2  
SB_25447| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.2  
SB_24780| Best HMM Match : Linker_histone (HMM E-Value=0.0023)         28   5.5  
SB_1788| Best HMM Match : Linker_histone (HMM E-Value=0.0023)          28   5.5  
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)                  27   7.3  
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.3  
SB_58477| Best HMM Match : Ion_trans (HMM E-Value=1.2e-25)             27   9.6  

>SB_45236| Best HMM Match : PRP38 (HMM E-Value=0)
          Length = 381

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = +3

Query: 75  RRKSARQGSEKRNA*SRPRRRLKMKLKSTDRSVKGSSKNLKPS 203
           RRKS  +  ++R + SR RRR   K +S +RS K  S+  + S
Sbjct: 317 RRKSRSRSRDRRRSRSRERRRDDRKRRSRERSPKRRSREREES 359


>SB_43807| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 103

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = +2

Query: 215 REGVAAKIDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPELHINYRL 367
           ++  AAK +   +++IE +NK ++  KE +  D   + Y ++ E + N+ L
Sbjct: 3   KKAKAAKREELKEMRIEMVNKAIEESKEFITPDDEKIAYALENETNYNFAL 53


>SB_31407| Best HMM Match : TolA (HMM E-Value=2.5)
          Length = 315

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
 Frame = +2

Query: 203 HMGTREGVAAKIDAETK-VKIEEMNKMVQTQKEAVIKDVLN--LVYDIKPELHINYRL 367
           H   ++  AAK + E K ++IE +NK ++  KE +  D L+  + Y ++ E + N+ L
Sbjct: 136 HQMKKKAKAAKREEELKEMRIEIVNKAIEESKEFITPDNLDKKIAYALENETNYNFAL 193


>SB_43805| Best HMM Match : YscO (HMM E-Value=6)
          Length = 243

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
 Frame = +2

Query: 203 HMGTREGVAAKIDAETK-VKIEEMNKMVQTQKEAVIKDVLN--LVYDIKPELHINYRL 367
           H   ++  AAK + E K ++IE +NK ++  KE +  D L+  + Y ++ E + N+ L
Sbjct: 136 HQMKKKAKAAKREEELKEMRIEIVNKAIEESKEFITPDNLDKKIAYALENETNYNFAL 193


>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
          Length = 1281

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +3

Query: 30  RPKESNSF*LLKNALRRKSARQGSEKRNA*SRPRRRLKMKLKSTDRSVKGS 182
           RP++++S    K A R + ARQ S + N      ++ K   + T R +K S
Sbjct: 405 RPRQASSKTKYKQAARPRQARQASHRTNKLQDQNKQDKQAARPTSRRIKTS 455


>SB_23465| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.1e-07)
          Length = 1118

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +3

Query: 126 PRRRLKMKLKSTDRSVKGSSKNLKPSTWVPGKVLRPRSMP 245
           PRR   M  KSTD+     +K    ST + G  +RPR  P
Sbjct: 474 PRRLRDMSTKSTDKLKASPTKLRNKSTRMRGGPVRPRDSP 513


>SB_5806| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 418

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 173 HAPVCTFQLHLEPPPW 126
           HAP+CT ++ L  PPW
Sbjct: 201 HAPLCTKRVRLSKPPW 216


>SB_25447| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 752

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 174 KGSSKNLKPSTWVPGKVLRPRSMPR 248
           + +SKNL P  W PG VL+   + R
Sbjct: 661 RDTSKNLDPKRWGPGPVLKAEEVDR 685


>SB_24780| Best HMM Match : Linker_histone (HMM E-Value=0.0023)
          Length = 186

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 57  LLKNALRRKSARQGSEKRNA*SRPRRRLKMKLKSTDRSVK 176
           L K +  +    + S+KRNA  RPR   K K ++  R VK
Sbjct: 126 LTKKSKSKSRKSKASKKRNARRRPRSARKTKSRAPARRVK 165


>SB_1788| Best HMM Match : Linker_histone (HMM E-Value=0.0023)
          Length = 186

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 57  LLKNALRRKSARQGSEKRNA*SRPRRRLKMKLKSTDRSVK 176
           L K +  +    + S+KRNA  RPR   K K ++  R VK
Sbjct: 126 LTKKSKSKSRKSKASKKRNARRRPRSARKTKSRAPARRVK 165


>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
          Length = 3342

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +2

Query: 218  EGVAAKIDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKP 343
            E    K DA T  ++E+++K+++ + E +IK+     YD+KP
Sbjct: 1737 EKAIIKHDATT-AELEKIDKLLRGKIEQLIKEHTKKKYDVKP 1777


>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2672

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 230  AKIDAETKVKIEEMNKMVQTQKEAVIKD 313
            AK+D E K K   +NKM   ++E +I D
Sbjct: 2455 AKLDGEFKGKYYPLNKMTDEEQEQLIND 2482


>SB_58477| Best HMM Match : Ion_trans (HMM E-Value=1.2e-25)
          Length = 578

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +2

Query: 401 LRLTNLI*SLLFKKINCILI*QIIVTSVCSLQVFLEPT 514
           +R+TN    L F  +  +++   IV+S+CSL + L+PT
Sbjct: 406 MRVTNTAALLFF--LPALIVGNFIVSSLCSLILLLKPT 441


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,467,654
Number of Sequences: 59808
Number of extensions: 228419
Number of successful extensions: 595
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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