BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30860 (697 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z70718-10|CAA94679.1| 512|Caenorhabditis elegans Hypothetical p... 30 1.4 Z68879-11|CAA93090.1| 512|Caenorhabditis elegans Hypothetical p... 30 1.4 U97196-7|AAB52462.1| 141|Caenorhabditis elegans Hypothetical pr... 29 2.4 Z36753-5|CAA85334.1| 173|Caenorhabditis elegans Hypothetical pr... 28 7.3 Z50794-4|CAC35819.1| 396|Caenorhabditis elegans Hypothetical pr... 27 9.7 >Z70718-10|CAA94679.1| 512|Caenorhabditis elegans Hypothetical protein C04G2.11 protein. Length = 512 Score = 30.3 bits (65), Expect = 1.4 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +1 Query: 73 IQNSLSFSLKKVIFSQHSVFFTKRKSVKFLFADNCRV 183 I+N+ + +L+K+ H VFFT+R K LF C + Sbjct: 158 IKNNPNLNLQKMCSIIHEVFFTRRSISKNLFDCGCEI 194 >Z68879-11|CAA93090.1| 512|Caenorhabditis elegans Hypothetical protein C04G2.11 protein. Length = 512 Score = 30.3 bits (65), Expect = 1.4 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +1 Query: 73 IQNSLSFSLKKVIFSQHSVFFTKRKSVKFLFADNCRV 183 I+N+ + +L+K+ H VFFT+R K LF C + Sbjct: 158 IKNNPNLNLQKMCSIIHEVFFTRRSISKNLFDCGCEI 194 >U97196-7|AAB52462.1| 141|Caenorhabditis elegans Hypothetical protein B0207.8 protein. Length = 141 Score = 29.5 bits (63), Expect = 2.4 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = -3 Query: 158 NLTLFLLVKNTECCEKITFLREKEREF*IPYQIFIYEFFLKH 33 N +FL + N + +KI F ++ F PY F+++ F KH Sbjct: 18 NFEIFLYLMNCQVLKKIQF---NKKHFSEPYTRFLFDIFKKH 56 >Z36753-5|CAA85334.1| 173|Caenorhabditis elegans Hypothetical protein T09A5.6 protein. Length = 173 Score = 27.9 bits (59), Expect = 7.3 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +2 Query: 455 KSFSDEMPKVIMRYRLIR 508 K FS+EMP ++M YR IR Sbjct: 150 KEFSEEMPDLVMYYRSIR 167 >Z50794-4|CAC35819.1| 396|Caenorhabditis elegans Hypothetical protein F59F5.8 protein. Length = 396 Score = 27.5 bits (58), Expect = 9.7 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -3 Query: 212 TTNLRSYYFKTLQLSANKNLTLFLLVKNTE 123 TT L YY + + KN+TL LV+++E Sbjct: 59 TTGLIPYYVNVISATVFKNMTLVCLVESSE 88 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,113,217 Number of Sequences: 27780 Number of extensions: 241874 Number of successful extensions: 529 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 520 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 529 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1602927856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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