BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30859 (638 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_05_0199 - 23165776-23166259,23166356-23167128,23167633-231678... 29 3.1 04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202 29 3.1 12_02_0592 + 20868884-20868954,20869091-20869216,20869554-208698... 28 5.4 10_08_0914 + 21535519-21535797,21535961-21536339,21536425-215365... 28 5.4 07_03_0378 + 17446311-17446514,17446814-17446927,17447124-174472... 28 5.4 12_01_0673 - 5745956-5750346,5750788-5750872,5751018-5751082,575... 28 7.2 04_04_0991 - 29969162-29969912,29970097-29970368 28 7.2 03_06_0501 - 34380155-34380637,34380961-34381029,34382206-343822... 28 7.2 11_01_0711 - 5839385-5840311,5840815-5841111 27 9.5 06_02_0038 + 10865068-10865150,10865249-10865335,10865835-108659... 27 9.5 05_01_0415 - 3275236-3276244,3276342-3276428,3276829-3277208,327... 27 9.5 01_06_1608 - 38612754-38616947,38617030-38617095 27 9.5 >05_05_0199 - 23165776-23166259,23166356-23167128,23167633-23167869, 23167973-23168197 Length = 572 Score = 29.1 bits (62), Expect = 3.1 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Frame = +2 Query: 44 ASGELSILHS-PESLSFSGSSKTFESLLKEIFSASLGLSVEENSEWNGLLITDPFNTPEA 220 A G L +++S P SLS + S +F SLL S G S+ L+T P + P + Sbjct: 4 APGSLPLVNSRPVSLSLAASRSSFSSLL----SGGAGSSLN--------LMTPPSSLPPS 51 Query: 221 VVEVYISGISSLG 259 Y G+SS G Sbjct: 52 SPSSYFGGVSSSG 64 >04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202 Length = 711 Score = 29.1 bits (62), Expect = 3.1 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = +2 Query: 269 DFKSKKYPLVVDEYEPDTFDVLKHRINQRFTNG 367 DF YP+ EY P FDV H +RF NG Sbjct: 311 DFGGDMYPVEDYEYAPADFDVRAHHERERF-NG 342 >12_02_0592 + 20868884-20868954,20869091-20869216,20869554-20869862, 20870017-20870300,20870410-20871305,20871586-20871642, 20872293-20872340,20873046-20873114 Length = 619 Score = 28.3 bits (60), Expect = 5.4 Identities = 22/88 (25%), Positives = 40/88 (45%) Frame = +2 Query: 179 NGLLITDPFNTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQRF 358 N +L PF TP+ + ++ + + G SAD PL D+ +P + ++ QR Sbjct: 255 NFILGAMPFGTPQDLNYANVTSVRTTGFSAD------PLPTDQKQP-AWKPYLYKGRQRT 307 Query: 359 TNGGNKLVNINLSDSDQLLSYSNVLGDL 442 + +N L D D + + +V G + Sbjct: 308 LFSSLETLNAALYDRDDVQDFLSVSGQV 335 >10_08_0914 + 21535519-21535797,21535961-21536339,21536425-21536568, 21536681-21536730,21536820-21536877,21536979-21537208 Length = 379 Score = 28.3 bits (60), Expect = 5.4 Identities = 13/54 (24%), Positives = 29/54 (53%) Frame = +2 Query: 20 ISSIIGINASGELSILHSPESLSFSGSSKTFESLLKEIFSASLGLSVEENSEWN 181 I S +G+ +SG+L L + + + G++ + + +E+ S + L E+ W+ Sbjct: 198 IQSAVGVRSSGDLMTLTAAAATALRGAATMKQRVQREMRSNASVLPYEKGHSWS 251 >07_03_0378 + 17446311-17446514,17446814-17446927,17447124-17447242, 17447595-17447641,17447720-17447820,17450769-17450840, 17451290-17451403,17451495-17451500,17451501-17451611 Length = 295 Score = 28.3 bits (60), Expect = 5.4 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = -3 Query: 162 STERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKT 10 S E P A N +F L LLE KL+ GLW+ + + ++++ KT Sbjct: 100 SVESP--APNHTFPSLRCFLLESFKLHQKGLWKSECICDPEVTSVKDLSKT 148 >12_01_0673 - 5745956-5750346,5750788-5750872,5751018-5751082, 5751816-5751993 Length = 1572 Score = 27.9 bits (59), Expect = 7.2 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +2 Query: 437 DLDIPKVKKQSLQHLKSSVEEDFQFLS 517 D+DI KV K S QHL + ++ F+F S Sbjct: 551 DIDIMKVLKLSYQHLPTELQICFRFCS 577 >04_04_0991 - 29969162-29969912,29970097-29970368 Length = 340 Score = 27.9 bits (59), Expect = 7.2 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = +2 Query: 410 LLSYSNVLGDLDIPKVKKQSLQHLKSSVEEDFQFLSELAALKAVTEKVESGAISADNIID 589 LLS LG LD + Q LQHL +S+ ++ A L A + +++ + + Sbjct: 164 LLSAVASLGSLDTALRQFQLLQHLLNSITSSSSDVAATAGLMATNLAATNTMVNSSSNVA 223 Query: 590 FYNLRINSL-HA 622 + ++N+L HA Sbjct: 224 SFQEQMNALAHA 235 >03_06_0501 - 34380155-34380637,34380961-34381029,34382206-34382229, 34382622-34382786 Length = 246 Score = 27.9 bits (59), Expect = 7.2 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = +2 Query: 461 KQSLQHLKSSVEEDFQFLSELAALKAVTEKVESGAISADNIIDFYNLRINSLHAL 625 K L HL+S EED Q L+E L +E+ A+ A N+ + + +H + Sbjct: 157 KSDLNHLRSVPEEDGQALAEKEGLSF----LETSALEALNVEKAFQTILKDIHQI 207 >11_01_0711 - 5839385-5840311,5840815-5841111 Length = 407 Score = 27.5 bits (58), Expect = 9.5 Identities = 18/63 (28%), Positives = 27/63 (42%) Frame = +2 Query: 56 LSILHSPESLSFSGSSKTFESLLKEIFSASLGLSVEENSEWNGLLITDPFNTPEAVVEVY 235 L+I H ++ + KT LKEI + L E+S + +TD T V E Sbjct: 108 LTIAHK---ITLANKMKTISDELKEITNQHLSFRFTEDSSYKEHRVTDKRETSSKVEEAL 164 Query: 236 ISG 244 + G Sbjct: 165 VVG 167 >06_02_0038 + 10865068-10865150,10865249-10865335,10865835-10865936, 10867000-10870078 Length = 1116 Score = 27.5 bits (58), Expect = 9.5 Identities = 13/43 (30%), Positives = 18/43 (41%) Frame = -3 Query: 450 GISKSPNTFEYDKS*SESLKLIFTSLLPPLVKR*LILCFNTSK 322 G+SK PN Y S S K + P + I C+N + Sbjct: 93 GVSKDPNPCSYSSSSPSSCKPSVVKFISPSARLQAIQCYNLQR 135 >05_01_0415 - 3275236-3276244,3276342-3276428,3276829-3277208, 3279236-3279325 Length = 521 Score = 27.5 bits (58), Expect = 9.5 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +2 Query: 230 VYISGISSLGSSADFKSKKYPLVV 301 ++++ ISS G+ DF + YPL+V Sbjct: 62 LFVASISSFGADHDFAAMMYPLLV 85 >01_06_1608 - 38612754-38616947,38617030-38617095 Length = 1419 Score = 27.5 bits (58), Expect = 9.5 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Frame = +2 Query: 242 GISSLGSSADFKSKKYPLVVD-EYEPDTFDVLKHRINQRFTNGGNKLVNINLSDSDQLLS 418 G S+L + D P + D Y F+ ++ ++QR + G+ + + L S ++ Sbjct: 954 GGSALAQAFDQIGNDCPDIDDVPYLKKAFEAVQELLSQRLISAGHDISDGGLIVSVLEMA 1013 Query: 419 YSNVLG-DLDIPKVKKQSLQHLKSSVEEDFQFLSE--LAALKAVTEKVESGAISADNI 583 ++ G L+I LQ L + E+ L E L L V +K+E+G ISA+ I Sbjct: 1014 FAGNCGVKLNIDSEDSGLLQALFA---EELGLLLEVHLKDLSVVKQKLEAGGISANVI 1068 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,894,890 Number of Sequences: 37544 Number of extensions: 279925 Number of successful extensions: 811 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 790 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 811 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1573040476 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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