SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30858
         (688 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023033-1|AAY55449.1|  186|Drosophila melanogaster IP04035p pro...    29   6.0  
AY061331-1|AAL28879.1|  403|Drosophila melanogaster LD25702p pro...    29   6.0  
AL021728-3|CAA16820.1| 1042|Drosophila melanogaster EG:95B7.8,FB...    29   6.0  
AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB prot...    29   6.0  
AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA ...    29   6.0  
AE014296-1025|AAF50735.1|  525|Drosophila melanogaster CG10489-P...    29   6.0  
AE013599-2059|AAF58136.1|  165|Drosophila melanogaster CG12959-P...    29   6.0  
AB102715-1|BAD10843.1|  403|Drosophila melanogaster DNA polymera...    29   6.0  
BT025842-1|ABF85742.1|  818|Drosophila melanogaster IP12350p pro...    29   7.9  
BT024328-1|ABC86390.1|  593|Drosophila melanogaster IP10742p pro...    29   7.9  
BT022956-1|AAY55372.1|  148|Drosophila melanogaster IP04235p pro...    29   7.9  
AY069653-1|AAL39798.1|  713|Drosophila melanogaster LD42374p pro...    29   7.9  
AE013599-1154|AAF58768.1|  713|Drosophila melanogaster CG11883-P...    29   7.9  
AE013599-1153|AAF58767.1|  732|Drosophila melanogaster CG11883-P...    29   7.9  

>BT023033-1|AAY55449.1|  186|Drosophila melanogaster IP04035p
           protein.
          Length = 186

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 21/84 (25%), Positives = 34/84 (40%)
 Frame = +1

Query: 52  VSNRLHTSVCLHAQYKNACQNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VR 231
           ++  L  ++ LH  ++   +NGA +    P   N +   H   +T+ +I       Q +R
Sbjct: 41  LTGTLTNALRLHLPHR---RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILR 97

Query: 232 VRRSHGLRPSICSLTMSAVCCSKL 303
                GLR  IC L     C   L
Sbjct: 98  GHTRQGLRCRICKLNAHGDCAPNL 121


>AY061331-1|AAL28879.1|  403|Drosophila melanogaster LD25702p
           protein.
          Length = 403

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +3

Query: 507 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLR 635
           ++DLP + E + ++    D  PP A++   PF  S      LR
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELR 213


>AL021728-3|CAA16820.1| 1042|Drosophila melanogaster
           EG:95B7.8,FBgn0000928;fs(1)Yb protein.
          Length = 1042

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
 Frame = +3

Query: 471 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 638
           K++ I  +  +  V L + FE  S     VD   PAA   +    SPFVT  PT+ L  E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279

Query: 639 FETVYGCCRV-NAF 677
           F+ +    +V N F
Sbjct: 280 FQELVKSFKVQNVF 293


>AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB
           protein.
          Length = 1042

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
 Frame = +3

Query: 471 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 638
           K++ I  +  +  V L + FE  S     VD   PAA   +    SPFVT  PT+ L  E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279

Query: 639 FETVYGCCRV-NAF 677
           F+ +    +V N F
Sbjct: 280 FQELVKSFKVQNVF 293


>AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA
           protein.
          Length = 1042

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
 Frame = +3

Query: 471 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 638
           K++ I  +  +  V L + FE  S     VD   PAA   +    SPFVT  PT+ L  E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279

Query: 639 FETVYGCCRV-NAF 677
           F+ +    +V N F
Sbjct: 280 FQELVKSFKVQNVF 293


>AE014296-1025|AAF50735.1|  525|Drosophila melanogaster CG10489-PA
           protein.
          Length = 525

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +3

Query: 507 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLR 635
           ++DLP + E + ++    D  PP A++   PF  S      LR
Sbjct: 293 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELR 335


>AE013599-2059|AAF58136.1|  165|Drosophila melanogaster CG12959-PA
           protein.
          Length = 165

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 21/84 (25%), Positives = 34/84 (40%)
 Frame = +1

Query: 52  VSNRLHTSVCLHAQYKNACQNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VR 231
           ++  L  ++ LH  ++   +NGA +    P   N +   H   +T+ +I       Q +R
Sbjct: 27  LTGTLTNALRLHLPHR---RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILR 83

Query: 232 VRRSHGLRPSICSLTMSAVCCSKL 303
                GLR  IC L     C   L
Sbjct: 84  GHTRQGLRCRICKLNAHGDCAPNL 107


>AB102715-1|BAD10843.1|  403|Drosophila melanogaster DNA polymerase
           epsilon secondsubunit protein.
          Length = 403

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +3

Query: 507 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLR 635
           ++DLP + E + ++    D  PP A++   PF  S      LR
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELR 213


>BT025842-1|ABF85742.1|  818|Drosophila melanogaster IP12350p
           protein.
          Length = 818

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 18/65 (27%), Positives = 25/65 (38%)
 Frame = +1

Query: 109 QNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 288
           +NGA +    P   N +   H   +T+ +I       Q +R     GLR  IC L     
Sbjct: 689 RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 748

Query: 289 CCSKL 303
           C   L
Sbjct: 749 CAPNL 753


>BT024328-1|ABC86390.1|  593|Drosophila melanogaster IP10742p
           protein.
          Length = 593

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 18/65 (27%), Positives = 25/65 (38%)
 Frame = +1

Query: 109 QNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 288
           +NGA +    P   N +   H   +T+ +I       Q +R     GLR  IC L     
Sbjct: 464 RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 523

Query: 289 CCSKL 303
           C   L
Sbjct: 524 CAPNL 528


>BT022956-1|AAY55372.1|  148|Drosophila melanogaster IP04235p
           protein.
          Length = 148

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 18/65 (27%), Positives = 25/65 (38%)
 Frame = +1

Query: 109 QNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 288
           +NGA +    P   N +   H   +T+ +I       Q +R     GLR  IC L     
Sbjct: 26  RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 85

Query: 289 CCSKL 303
           C   L
Sbjct: 86  CAPNL 90


>AY069653-1|AAL39798.1|  713|Drosophila melanogaster LD42374p
           protein.
          Length = 713

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -1

Query: 607 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 485
           V++    R    GCGS  SG+  +   + GRST  S+QLEK
Sbjct: 83  VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122


>AE013599-1154|AAF58768.1|  713|Drosophila melanogaster CG11883-PB,
           isoform B protein.
          Length = 713

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -1

Query: 607 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 485
           V++    R    GCGS  SG+  +   + GRST  S+QLEK
Sbjct: 83  VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122


>AE013599-1153|AAF58767.1|  732|Drosophila melanogaster CG11883-PA,
           isoform A protein.
          Length = 732

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -1

Query: 607 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 485
           V++    R    GCGS  SG+  +   + GRST  S+QLEK
Sbjct: 83  VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,318,381
Number of Sequences: 53049
Number of extensions: 623159
Number of successful extensions: 1677
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1677
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -