BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30857 (694 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces po... 27 2.6 SPBC1773.12 |||transcription factor |Schizosaccharomyces pombe|c... 25 7.9 SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 25 7.9 >SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces pombe|chr 1|||Manual Length = 422 Score = 27.1 bits (57), Expect = 2.6 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = -1 Query: 103 LFKFETFSFLLPTQVHMFKHS*CLVIEIFVNYTF 2 L+K F L T +H+FK + + F++YT+ Sbjct: 375 LYKTHARRFSLSTTIHLFKKIVRITLSTFISYTW 408 >SPBC1773.12 |||transcription factor |Schizosaccharomyces pombe|chr 2|||Manual Length = 594 Score = 25.4 bits (53), Expect = 7.9 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -2 Query: 441 LCYLWLMIYFTSLKYKI*ISN 379 +CYLWL +Y ++I SN Sbjct: 501 ICYLWLFLYCPFTPFQILFSN 521 >SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1513 Score = 25.4 bits (53), Expect = 7.9 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = +1 Query: 202 KNVCFFNYNFTHVSSL 249 +N C FNY+F+ +SSL Sbjct: 422 ENPCLFNYSFSDLSSL 437 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,469,952 Number of Sequences: 5004 Number of extensions: 45554 Number of successful extensions: 89 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 89 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 321951680 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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