BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30857 (694 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_57109| Best HMM Match : DUF1280 (HMM E-Value=7.4) 33 0.17 SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) 33 0.17 SB_51587| Best HMM Match : F5_F8_type_C (HMM E-Value=2.6e-37) 28 6.2 SB_51201| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3 >SB_57109| Best HMM Match : DUF1280 (HMM E-Value=7.4) Length = 605 Score = 33.5 bits (73), Expect = 0.17 Identities = 25/101 (24%), Positives = 41/101 (40%) Frame = -2 Query: 339 RKIVLSGRLLCISDTFLTRENRRKSSYYIY*T*NVRKIVIKKTYVFMTLLRHKIKRRSDY 160 R L GR +C+ ++R +S K +KK+ F L + K+K+ Sbjct: 62 RDRTLRGRNVCLEADIHFADSRFANSLSCNSVKTKPKFGVKKSRSFNYLRKRKLKQFDQE 121 Query: 159 FKSFFYS*QICLRSVLTIYCLNLKRFHFYYRHKYICLSTRN 37 S F C + T + + +R F R + +C ST N Sbjct: 122 LDSVFVEESNCQTATGTFHDFSSERTQFSRRQRDVCSSTNN 162 >SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) Length = 870 Score = 33.5 bits (73), Expect = 0.17 Identities = 25/101 (24%), Positives = 41/101 (40%) Frame = -2 Query: 339 RKIVLSGRLLCISDTFLTRENRRKSSYYIY*T*NVRKIVIKKTYVFMTLLRHKIKRRSDY 160 R L GR +C+ ++R +S K +KK+ F L + K+K+ Sbjct: 62 RDRTLRGRNVCLEADIHFADSRFANSLSCNSVKTKPKFGVKKSRSFNYLRKRKLKQFDQE 121 Query: 159 FKSFFYS*QICLRSVLTIYCLNLKRFHFYYRHKYICLSTRN 37 S F C + T + + +R F R + +C ST N Sbjct: 122 LDSVFVEESNCQTATGTFHDFSSERTQFSRRQRDVCSSTNN 162 >SB_51587| Best HMM Match : F5_F8_type_C (HMM E-Value=2.6e-37) Length = 404 Score = 28.3 bits (60), Expect = 6.2 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 5/53 (9%) Frame = -3 Query: 263 LITFTKLETCVKL*LKKHTFL*RYYVIKLSAEVI-----ILKAFFIADKFACV 120 ++ F L+ +KL + F R++V+K S ++ +L+ +AD+ ACV Sbjct: 13 VLMFLALQQVIKLTAAEDRFQSRFFVVKESQKLYVGAQGVLRTVLVADRLACV 65 >SB_51201| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 148 Score = 27.9 bits (59), Expect = 8.3 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = -2 Query: 228 IVIKKTYVFMTLLRHKIKRRSDYFKSFFYS*QICLRSVLTIYCL-NLKRFHFYYRHKYIC 52 I+I T + + H+ ++ +S+ Y I + +T L + K HFY+RH+ I Sbjct: 5 IIINITTTTIIIFYHRHQKHQQQQQSYLYLKDIIRITNVTFSILPSPKNHHFYHRHQIIT 64 Query: 51 L 49 + Sbjct: 65 I 65 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,938,658 Number of Sequences: 59808 Number of extensions: 291657 Number of successful extensions: 466 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 433 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 466 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1805522550 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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