BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30857 (694 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g39160.1 68415.m04810 hypothetical protein 29 2.2 At3g13750.1 68416.m01735 beta-galactosidase, putative / lactase,... 28 5.1 >At2g39160.1 68415.m04810 hypothetical protein Length = 120 Score = 29.5 bits (63), Expect = 2.2 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -2 Query: 486 LKVF*RTLNQFASDHLCYLWLM 421 L+ F RTL+Q +H CYLW++ Sbjct: 19 LRKFRRTLSQKYDNHYCYLWMV 40 >At3g13750.1 68416.m01735 beta-galactosidase, putative / lactase, putative similar to beta-galactosidase precursor SP:P48980 from [Lycopersicon esculentum] Length = 847 Score = 28.3 bits (60), Expect = 5.1 Identities = 9/25 (36%), Positives = 17/25 (68%) Frame = +3 Query: 546 HFYDSSYYFMTFVKLINNGTLYMHL 620 ++++ +Y + FVKL+ LY+HL Sbjct: 96 YYFEGNYDLVKFVKLVQQSGLYLHL 120 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,883,609 Number of Sequences: 28952 Number of extensions: 204402 Number of successful extensions: 282 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 282 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 282 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1477286152 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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