Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30853
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC062705-1|AAH62705.1|   98|Homo sapiens similar to DNA segment,...    43   0.001
BC051802-1|AAH51802.1|   98|Homo sapiens similar to DNA segment,...    43   0.001
BC095436-1|AAH95436.1|  108|Homo sapiens MGC71993 protein protein.     39   0.020

>BC062705-1|AAH62705.1|   98|Homo sapiens similar to DNA segment,
           Chr 11, Brigham & Womens Genetics 0434 expressed
           protein.
          Length = 98

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 25/74 (33%), Positives = 40/74 (54%)
 Frame = +2

Query: 2   IIQLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFXIEVEKGYTLNAQNCWIAALXYLI 181
           +I L ++G+F+ + +  L+ED+PF EK+     E+    +   Y   + NC+IAA  YL+
Sbjct: 23  VIMLIMLGIFFNVHSAVLIEDVPFTEKD----FENGPQNIYNLYEQVSYNCFIAAGLYLL 78

Query: 182 TLVVSGHQFWLNNR 223
               S  Q  LN R
Sbjct: 79  LGGFSFCQVRLNKR 92


>BC051802-1|AAH51802.1|   98|Homo sapiens similar to DNA segment,
           Chr 11, Brigham & Womens Genetics 0434 expressed
           protein.
          Length = 98

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 25/74 (33%), Positives = 40/74 (54%)
 Frame = +2

Query: 2   IIQLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFXIEVEKGYTLNAQNCWIAALXYLI 181
           +I L ++G+F+ + +  L+ED+PF EK+     E+    +   Y   + NC+IAA  YL+
Sbjct: 23  VIMLIMLGIFFNVHSAVLIEDVPFTEKD----FENGPQNIYNLYEQVSYNCFIAAGLYLL 78

Query: 182 TLVVSGHQFWLNNR 223
               S  Q  LN R
Sbjct: 79  LGGFSFCQVRLNKR 92


>BC095436-1|AAH95436.1|  108|Homo sapiens MGC71993 protein protein.
          Length = 108

 Score = 38.7 bits (86), Expect = 0.020
 Identities = 23/69 (33%), Positives = 37/69 (53%)
 Frame = +2

Query: 17  LMGVFYYIRAVALLEDLPFDEKNPPHSIEDFXIEVEKGYTLNAQNCWIAALXYLITLVVS 196
           ++G+F+ + +  L+ED+PF EK+     E+    +   Y   + NC+IAA  YL+    S
Sbjct: 38  MLGIFFNVHSAVLIEDVPFTEKD----FENGPQNIYNLYEQVSYNCFIAAGLYLLLGGFS 93

Query: 197 GHQFWLNNR 223
             Q  LN R
Sbjct: 94  FCQVRLNKR 102


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,986,814
Number of Sequences: 237096
Number of extensions: 1803273
Number of successful extensions: 6327
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6324
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)