BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30853 (704 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC062705-1|AAH62705.1| 98|Homo sapiens similar to DNA segment,... 43 0.001 BC051802-1|AAH51802.1| 98|Homo sapiens similar to DNA segment,... 43 0.001 BC095436-1|AAH95436.1| 108|Homo sapiens MGC71993 protein protein. 39 0.020 >BC062705-1|AAH62705.1| 98|Homo sapiens similar to DNA segment, Chr 11, Brigham & Womens Genetics 0434 expressed protein. Length = 98 Score = 42.7 bits (96), Expect = 0.001 Identities = 25/74 (33%), Positives = 40/74 (54%) Frame = +2 Query: 2 IIQLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFXIEVEKGYTLNAQNCWIAALXYLI 181 +I L ++G+F+ + + L+ED+PF EK+ E+ + Y + NC+IAA YL+ Sbjct: 23 VIMLIMLGIFFNVHSAVLIEDVPFTEKD----FENGPQNIYNLYEQVSYNCFIAAGLYLL 78 Query: 182 TLVVSGHQFWLNNR 223 S Q LN R Sbjct: 79 LGGFSFCQVRLNKR 92 >BC051802-1|AAH51802.1| 98|Homo sapiens similar to DNA segment, Chr 11, Brigham & Womens Genetics 0434 expressed protein. Length = 98 Score = 42.7 bits (96), Expect = 0.001 Identities = 25/74 (33%), Positives = 40/74 (54%) Frame = +2 Query: 2 IIQLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFXIEVEKGYTLNAQNCWIAALXYLI 181 +I L ++G+F+ + + L+ED+PF EK+ E+ + Y + NC+IAA YL+ Sbjct: 23 VIMLIMLGIFFNVHSAVLIEDVPFTEKD----FENGPQNIYNLYEQVSYNCFIAAGLYLL 78 Query: 182 TLVVSGHQFWLNNR 223 S Q LN R Sbjct: 79 LGGFSFCQVRLNKR 92 >BC095436-1|AAH95436.1| 108|Homo sapiens MGC71993 protein protein. Length = 108 Score = 38.7 bits (86), Expect = 0.020 Identities = 23/69 (33%), Positives = 37/69 (53%) Frame = +2 Query: 17 LMGVFYYIRAVALLEDLPFDEKNPPHSIEDFXIEVEKGYTLNAQNCWIAALXYLITLVVS 196 ++G+F+ + + L+ED+PF EK+ E+ + Y + NC+IAA YL+ S Sbjct: 38 MLGIFFNVHSAVLIEDVPFTEKD----FENGPQNIYNLYEQVSYNCFIAAGLYLLLGGFS 93 Query: 197 GHQFWLNNR 223 Q LN R Sbjct: 94 FCQVRLNKR 102 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 90,986,814 Number of Sequences: 237096 Number of extensions: 1803273 Number of successful extensions: 6327 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 6252 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6324 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 8175213644 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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