Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30852
(436 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 25 0.31
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 0.95
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 0.95
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 0.95
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 0.95
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 0.95
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 23 0.95
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 23 1.7
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 22 2.2
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 20 8.9
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 25.0 bits (52), Expect = 0.31
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 258 SFIMFASLTGSSFFRNVNDLLSQAFRPKSMNCLMDN 151
+F A+ SS FRN D + FRP++ + L+ N
Sbjct: 381 TFSTTANSCRSSTFRNNRDEYNVCFRPRNNSILIKN 416
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.4 bits (48), Expect = 0.95
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 421 PVPYVDKTFAELGQRRRIW--FHLFKACYFL 335
P PYVD TF +RR ++ F+L C +
Sbjct: 195 PEPYVDVTFTIKIRRRTLYYFFNLIVPCVLI 225
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.4 bits (48), Expect = 0.95
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 421 PVPYVDKTFAELGQRRRIW--FHLFKACYFL 335
P PYVD TF +RR ++ F+L C +
Sbjct: 195 PEPYVDVTFTIKIRRRTLYYFFNLIVPCVLI 225
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.4 bits (48), Expect = 0.95
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 421 PVPYVDKTFAELGQRRRIW--FHLFKACYFL 335
P PYVD TF +RR ++ F+L C +
Sbjct: 195 PEPYVDVTFTIKIRRRTLYYFFNLIVPCVLI 225
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.4 bits (48), Expect = 0.95
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 421 PVPYVDKTFAELGQRRRIW--FHLFKACYFL 335
P PYVD TF +RR ++ F+L C +
Sbjct: 195 PEPYVDVTFTIKIRRRTLYYFFNLIVPCVLI 225
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.4 bits (48), Expect = 0.95
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 421 PVPYVDKTFAELGQRRRIW--FHLFKACYFL 335
P PYVD TF +RR ++ F+L C +
Sbjct: 195 PEPYVDVTFTIKIRRRTLYYFFNLIVPCVLI 225
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 23.4 bits (48), Expect = 0.95
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +2
Query: 374 PTLTQFCERLVHIRNRHADVV 436
PT FC ++ H+ N H ++V
Sbjct: 221 PTELTFCNKIKHLVNLHKNLV 241
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 22.6 bits (46), Expect = 1.7
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +2
Query: 122 DFYSQFNPSPLSIKQFIDFGLNACESKSF--TFLKKELPVRLANIMKEIALLPENLLRMP 295
DFY + +P L ++ +DF L A + T K++ +L +K +A +P
Sbjct: 54 DFYKKLSPMRLIVQTCLDFLLLALNISTILTTVRKQQQWAQLIQNLKVVATTKTKAWFLP 113
Query: 296 SV 301
V
Sbjct: 114 FV 115
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 22.2 bits (45), Expect = 2.2
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -1
Query: 196 LASVQTEVYELFDGQRRRVELRVEIKHFRHIRENRSC*PHFES 68
LASV+ V FD +R+ + + ++ + I + R P+F++
Sbjct: 69 LASVRCPVGLAFDIERQTCDWKTKVNNCDVIEKPRKVLPNFKT 111
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 20.2 bits (40), Expect = 8.9
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -3
Query: 434 RRQRAGSLCGQDVRRIGSASEDLVP 360
RR+R+GS R S E L P
Sbjct: 802 RRERSGSESSSISERCSSRVESLTP 826
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,557
Number of Sequences: 336
Number of extensions: 1955
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 9670396
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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