Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30852
         (436 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M98552-5|AAA28207.1|  401|Caenorhabditis elegans Hypothetical pr...   121   3e-28
AF024499-7|AAB70358.3|  733|Caenorhabditis elegans Hypothetical ...    30   0.83 
AC006827-4|AAF60881.1|  579|Caenorhabditis elegans Hypothetical ...    29   1.9  
AL132862-10|CAB60540.1|  122|Caenorhabditis elegans Hypothetical...    27   4.4  
Z67879-6|CAA91791.2| 1482|Caenorhabditis elegans Hypothetical pr...    27   7.8  
AL023817-1|CAA19436.2| 1482|Caenorhabditis elegans Hypothetical ...    27   7.8  

>M98552-5|AAA28207.1|  401|Caenorhabditis elegans Hypothetical
           protein ZK370.5 protein.
          Length = 401

 Score =  121 bits (291), Expect = 3e-28
 Identities = 57/122 (46%), Positives = 79/122 (64%)
 Frame = +2

Query: 71  FKMRLAGAIFTNVTKMLDFYSQFNPSPLSIKQFIDFGLNACESKSFTFLKKELPVRLANI 250
           F  +L G    ++ K LD+YSQF PS L+I+Q++DFG     + S+TFLK EL VRLANI
Sbjct: 3   FSRKLLGPFVGSLAKKLDYYSQFQPSSLTIQQYLDFGRIGTSANSYTFLKNELLVRLANI 62

Query: 251 MKEIALLPENLLRMPSVGLVNQWYERSFEEITRFEQMEPDPPTLTQFCERLVHIRNRHAD 430
           M+E  LLP  LL+MPS  +V+ WY  SFE++  FE  +  P  + +F ++L  +  RHA 
Sbjct: 63  MQEFTLLPPKLLQMPSSKMVSNWYAESFEDLLLFEASDSSPEQVARFNDQLTVVLKRHAH 122

Query: 431 VV 436
           VV
Sbjct: 123 VV 124


>AF024499-7|AAB70358.3|  733|Caenorhabditis elegans Hypothetical
           protein F42G2.6 protein.
          Length = 733

 Score = 29.9 bits (64), Expect = 0.83
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = +1

Query: 130 LAVQPFAVV-HQTIHRLRSERLREQIIHVPKKGATSQAREHNEGDSATP*EPTSNAFGGL 306
           L +Q + ++ + +  RL    L+ Q   +PK  A +QA+ H +  +      T++ +  L
Sbjct: 404 LEIQNYRILPNSSDKRLEEHELKTQSSTLPKPCAHAQAQAHAQAQAHAQAHETNDNWPKL 463

Query: 307 SQPMVRALIRGNN 345
              + RAL++G +
Sbjct: 464 MTELFRALLQGQS 476


>AC006827-4|AAF60881.1|  579|Caenorhabditis elegans Hypothetical
           protein Y81B9A.1 protein.
          Length = 579

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 148 RRVELRVEIKHFRHIRENRSC*PHFESFTYKYLSVR 41
           R  ELR E+ +  ++R N +   HFES   +YL ++
Sbjct: 534 RETELRKELANPMNVRYNNNTRAHFESHLDRYLDLK 569


>AL132862-10|CAB60540.1|  122|Caenorhabditis elegans Hypothetical
           protein Y73F8A.15 protein.
          Length = 122

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 65  ETFKMRLAGAIFTNVTKMLDFYSQFNPSPLSIKQFI 172
           +TF   + G IFT    +  + ++ NP PL +K  I
Sbjct: 42  DTFNFNVRGRIFTKALFVESYLTKPNPEPLILKSSI 77


>Z67879-6|CAA91791.2| 1482|Caenorhabditis elegans Hypothetical
           protein VF11C1L.1 protein.
          Length = 1482

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +2

Query: 281 LLRMPSVGLVNQWYERSFEEITRFEQMEPDPPTLTQFCERLVHIRNRHADVV 436
           LL+   V L+ Q YE     I + E +  D       C R ++ R R A +V
Sbjct: 714 LLKPGDVELIKQGYEEDIVPIPKKEPLLVDRRHAFAQCNRGINFRRRTAQIV 765


>AL023817-1|CAA19436.2| 1482|Caenorhabditis elegans Hypothetical
           protein VF11C1L.1 protein.
          Length = 1482

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +2

Query: 281 LLRMPSVGLVNQWYERSFEEITRFEQMEPDPPTLTQFCERLVHIRNRHADVV 436
           LL+   V L+ Q YE     I + E +  D       C R ++ R R A +V
Sbjct: 714 LLKPGDVELIKQGYEEDIVPIPKKEPLLVDRRHAFAQCNRGINFRRRTAQIV 765


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,524,566
Number of Sequences: 27780
Number of extensions: 185730
Number of successful extensions: 582
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)