BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30852 (436 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g06483.1 68416.m00751 pyruvate dehydrogenase (lipoamide) kina... 51 4e-07 At5g07850.1 68418.m00902 transferase family protein similar to a... 29 1.0 At2g18710.1 68415.m02179 preprotein translocase secY subunit, ch... 28 3.1 At3g05430.1 68416.m00595 PWWP domain-containing protein contains... 27 4.1 At4g29360.2 68417.m04195 glycosyl hydrolase family 17 protein si... 27 5.5 At4g29360.1 68417.m04194 glycosyl hydrolase family 17 protein si... 27 5.5 At2g46020.2 68415.m05725 transcription regulatory protein SNF2, ... 27 7.2 At2g46020.1 68415.m05724 transcription regulatory protein SNF2, ... 27 7.2 At2g31620.1 68415.m03863 receptor-like protein kinase-related co... 27 7.2 At1g44130.1 68414.m05097 nucellin protein, putative similar to n... 27 7.2 At3g24190.1 68416.m03036 ABC1 family protein contains Pfam domai... 26 9.5 >At3g06483.1 68416.m00751 pyruvate dehydrogenase (lipoamide) kinase (PDHK) nearly identical to pyruvate dehydrogenase kinase [Arabidopsis thaliana] GI:3641834 Length = 369 Score = 50.8 bits (116), Expect = 4e-07 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 3/98 (3%) Frame = +2 Query: 152 LSIKQFIDFGLNACESK---SFTFLKKELPVRLANIMKEIALLPENLLRMPSVGLVNQWY 322 +S++ ++FG E S FL KELP+R+A E+ LP L P+V V WY Sbjct: 29 VSLRYMMEFGSKPTERNLLISAQFLHKELPIRVARRAIELQTLPYGLSDKPAVLKVRDWY 88 Query: 323 ERSFEEITRFEQMEPDPPTLTQFCERLVHIRNRHADVV 436 SF ++ F +++ D F + + ++ RH +VV Sbjct: 89 LESFRDMRAFPEIK-DSGDEKDFTQMIKAVKVRHNNVV 125 >At5g07850.1 68418.m00902 transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus [gi:2239091]; contains Pfam transferase family domain PF002458 Length = 456 Score = 29.5 bits (63), Expect = 1.0 Identities = 21/68 (30%), Positives = 30/68 (44%) Frame = +1 Query: 142 PFAVVHQTIHRLRSERLREQIIHVPKKGATSQAREHNEGDSATP*EPTSNAFGGLSQPMV 321 PF + I R S L+E+I H + TS + NE T T ++F L+ M Sbjct: 224 PFTHSDEFISRFESPVLKERIFHFSSETITSLKSKANEESRTT----TISSFQALAAFMW 279 Query: 322 RALIRGNN 345 R + R N Sbjct: 280 RCITRARN 287 >At2g18710.1 68415.m02179 preprotein translocase secY subunit, chloroplast (CpSecY) Identical to SP|Q38885 Preprotein translocase secY subunit, chloroplast precursor (CpSecY) {Arabidopsis thaliana} Length = 551 Score = 27.9 bits (59), Expect = 3.1 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -2 Query: 285 SRFSGSSAISFIMFASLTGSSFFRNVNDLLSQAF 184 +RF+G SA+ + FA G SF+ N LL F Sbjct: 402 ARFTGISALKNVAFALTPGGSFYLPTNILLIAFF 435 >At3g05430.1 68416.m00595 PWWP domain-containing protein contains Pfam profile:PF00855 PWWP domain Length = 965 Score = 27.5 bits (58), Expect = 4.1 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -2 Query: 219 FRNVNDLLSQAFRPKSMNCLMDNGEGLN 136 F ++ QAFR +S+ CLM E LN Sbjct: 313 FEEFDETYEQAFRARSVYCLMKTHEPLN 340 >At4g29360.2 68417.m04195 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] Length = 488 Score = 27.1 bits (57), Expect = 5.5 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +1 Query: 256 GDSATP*EPTSNAFGGLSQPMVRALIRGNNTL 351 G++ TP PT++ G P +I GN+T+ Sbjct: 347 GENTTPVSPTNSTTGTSPSPSSSPIINGNSTV 378 >At4g29360.1 68417.m04194 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] Length = 534 Score = 27.1 bits (57), Expect = 5.5 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +1 Query: 256 GDSATP*EPTSNAFGGLSQPMVRALIRGNNTL 351 G++ TP PT++ G P +I GN+T+ Sbjct: 347 GENTTPVSPTNSTTGTSPSPSSSPIINGNSTV 378 >At2g46020.2 68415.m05725 transcription regulatory protein SNF2, putative similar to SP|P22082 Transcription regulatory protein SNF2 (SWI/SNF complex component SNF2) {Saccharomyces cerevisiae}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain Length = 2193 Score = 26.6 bits (56), Expect = 7.2 Identities = 14/50 (28%), Positives = 27/50 (54%) Frame = +2 Query: 221 KELPVRLANIMKEIALLPENLLRMPSVGLVNQWYERSFEEITRFEQMEPD 370 +E + L ++ + E + +PS+ VN+ RS EE+ F+QM+ + Sbjct: 1502 EERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEE 1551 >At2g46020.1 68415.m05724 transcription regulatory protein SNF2, putative similar to SP|P22082 Transcription regulatory protein SNF2 (SWI/SNF complex component SNF2) {Saccharomyces cerevisiae}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain Length = 2192 Score = 26.6 bits (56), Expect = 7.2 Identities = 14/50 (28%), Positives = 27/50 (54%) Frame = +2 Query: 221 KELPVRLANIMKEIALLPENLLRMPSVGLVNQWYERSFEEITRFEQMEPD 370 +E + L ++ + E + +PS+ VN+ RS EE+ F+QM+ + Sbjct: 1501 EERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEE 1550 >At2g31620.1 68415.m03863 receptor-like protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069; similar to receptor-like protein kinase 4 (GI:13506745) and receptor-like protein kinase 5 (GI:13506747) [Arabidopsis thaliana] Length = 255 Score = 26.6 bits (56), Expect = 7.2 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +3 Query: 111 RKCLISTRSSTLRRCPSN 164 R CL + S LRRCP+N Sbjct: 98 RSCLFTAFSGILRRCPNN 115 >At1g44130.1 68414.m05097 nucellin protein, putative similar to nucellin GI:2290202 from [Hordeum vulgare] Length = 405 Score = 26.6 bits (56), Expect = 7.2 Identities = 10/21 (47%), Positives = 17/21 (80%) Frame = -2 Query: 126 KSSIFVTFVKIAPANLILKVS 64 KSSIF TF+K +P++++ +S Sbjct: 20 KSSIFKTFIKSSPSSVVFPLS 40 >At3g24190.1 68416.m03036 ABC1 family protein contains Pfam domain, PF03109: ABC1 family Length = 793 Score = 26.2 bits (55), Expect = 9.5 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 9/83 (10%) Frame = +2 Query: 122 DFYSQFNPSPLSIKQFID-FGLNACESKSFTFLKKELPVRLANIMKEIALLPEN---LLR 289 D YS+ +PSP++ + E+ +K + P L + ++ ++ L + Sbjct: 257 DVYSELSPSPIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFVIRNLGLFLRK 316 Query: 290 MPSV-----GLVNQWYERSFEEI 343 P V GLV++W R FEE+ Sbjct: 317 FPQVSVDVVGLVDEWAARFFEEL 339 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,908,352 Number of Sequences: 28952 Number of extensions: 172639 Number of successful extensions: 524 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 515 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 524 length of database: 12,070,560 effective HSP length: 75 effective length of database: 9,899,160 effective search space used: 683042040 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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