Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30851
(627 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g39660.1 68417.m05608 alanine--glyoxylate aminotransferase, p... 193 9e-50
At3g08860.1 68416.m01030 alanine--glyoxylate aminotransferase, p... 171 4e-43
At2g38400.1 68415.m04717 alanine--glyoxylate aminotransferase, p... 167 7e-42
At1g80600.1 68414.m09457 acetylornithine aminotransferase, mitoc... 69 3e-12
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 64 7e-11
At3g48730.1 68416.m05321 glutamate-1-semialdehyde 2,1-aminomutas... 53 2e-07
At5g63570.1 68418.m07979 glutamate-1-semialdehyde 2,1-aminomutas... 50 1e-06
At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase / gamm... 46 3e-05
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 28 4.4
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 28 4.4
At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing ... 28 5.8
At3g26190.1 68416.m03268 cytochrome P450 71B21, putative (CYP71B... 28 5.8
At1g16720.1 68414.m02005 expressed protein 28 5.8
>At4g39660.1 68417.m05608 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 476
Score = 193 bits (470), Expect = 9e-50
Identities = 86/171 (50%), Positives = 123/171 (71%)
Frame = +2
Query: 113 MPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDL 292
+PP PRPY GPS +V Q + ++ PS+ + Y+KP+ + +G MQ+LYD G+RYLD
Sbjct: 41 IPPFVHQPRPYKGPSADEVLQKRKKFLGPSLFHYYQKPLNIVEGKMQYLYDESGRRYLDA 100
Query: 293 FGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLV 472
F GIVTVS GHCHP + A+ +Q +L H T +Y H I ++ E LAAK+PG+L VVY V
Sbjct: 101 FAGIVTVSCGHCHPDILNAITEQSKLLQHATTIYLHHAIGDFAEALAAKMPGNLKVVYFV 160
Query: 473 NSGSEANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAIP 625
NSGSEANELA ++A+ YTG+L++ISL+ +YHG +S+ +GLTA +++ +P
Sbjct: 161 NSGSEANELAMMMARLYTGSLEMISLRNAYHGGSSNTIGLTALNTWKYPLP 211
>At3g08860.1 68416.m01030 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 481
Score = 171 bits (415), Expect = 4e-43
Identities = 75/171 (43%), Positives = 116/171 (67%)
Frame = +2
Query: 110 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLD 289
KMPP ++ P PY GPS ++ + ++ P++ + Y P+ + + MQ+++D +G+RYLD
Sbjct: 45 KMPPFNYSPPPYDGPSTAEIIAKRREFLSPALFHFYNTPLNIVEAKMQYVFDENGRRYLD 104
Query: 290 LFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYL 469
FGGI TVS GHCHP+V ++ QL ++ H+T LY + I ++ E L + LPGDL VV+
Sbjct: 105 AFGGIATVSCGHCHPEVVNSVVKQLKLINHSTILYLNHTISDFAEALVSTLPGDLKVVFF 164
Query: 470 VNSGSEANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAI 622
NSG+EANELA ++A+ YTG DI+SL+ SYHG ++ MG TA +++ +
Sbjct: 165 TNSGTEANELAMMMARLYTGCNDIVSLRNSYHGNAAATMGATAQSNWKFNV 215
>At2g38400.1 68415.m04717 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 477
Score = 167 bits (405), Expect = 7e-42
Identities = 75/172 (43%), Positives = 110/172 (63%)
Frame = +2
Query: 107 AKMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYL 286
A++PP + P PYTGPS + + ++ PS+ Y+KP+ + G MQ+L+D G+RYL
Sbjct: 41 ARLPPFAYTPPPYTGPSADVILSKRKEFLSPSMFCLYRKPLNIVDGKMQYLFDESGRRYL 100
Query: 287 DLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVY 466
D F GI V+ GHCHP V + +Q+ L H T LY + I ++ E LA+KLPGDL VV+
Sbjct: 101 DAFAGIAVVNCGHCHPDVVEPVINQIKRLQHPTVLYLNHAIADFSEALASKLPGDLKVVF 160
Query: 467 LVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAI 622
NSG+EANELA ++AK YTG DI++++ YHG ++ MG T ++ +
Sbjct: 161 FTNSGTEANELALMMAKLYTGCQDIVAVRNGYHGNAAATMGATGQSMWKFNV 212
>At1g80600.1 68414.m09457 acetylornithine aminotransferase,
mitochondrial, putative / acetylornithine transaminase,
putative / AOTA, putative / ACOAT, putative similar to
SP|O04866 Acetylornithine aminotransferase,
mitochondrial precursor (EC 2.6.1.11) (ACOAT)
(Acetylornithine transaminase) (AOTA) {Alnus glutinosa};
contains Pfam profile PF00202: aminotransferase, class
III
Length = 457
Score = 68.5 bits (160), Expect = 3e-12
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Frame = +2
Query: 218 KKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYR 397
+ PV+L+ G L+D +GK YLD GI ++GH P A+ +Q VL H +N+Y
Sbjct: 75 RAPVVLSSGKGCKLFDPEGKEYLDCASGIAVNALGHGDPDWLRAVTEQAGVLAHVSNVYY 134
Query: 398 HPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAK---AYTGNLD------IISL 550
E ++L A D V+ NSG+EANE A ++ +T D I+
Sbjct: 135 TIPQIELAKRLVASSFADR--VFFCNSGTEANEAAIKFSRKFQRFTHPEDKEVATGFIAF 192
Query: 551 QTSYHGYTSSLMGLTATQSYR 613
S+HG T + LT+ + YR
Sbjct: 193 TNSFHGRTLGALALTSKEQYR 213
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 64.1 bits (149), Expect = 7e-11
Identities = 33/108 (30%), Positives = 60/108 (55%)
Frame = +2
Query: 200 SITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWH 379
S N + PV+ ++ + ++D +GKRY+D V+ GHCHPK+ AL++Q++ L
Sbjct: 51 SAHNYHPVPVVFSRANGSTIWDPEGKRYIDFLAAYSAVNQGHCHPKIMKALQEQVEKLTL 110
Query: 380 TTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY 523
++ + + K + E+L D+ V +N+G+E E A LA+ +
Sbjct: 111 SSRAFYNDKFPVFAERLTNMFGYDM--VLPMNTGAEGVETALKLARKW 156
>At3g48730.1 68416.m05321 glutamate-1-semialdehyde 2,1-aminomutase 2
(GSA 2) / glutamate-1-semialdehyde aminotransferase 2
(GSA-AT 2) identical to GSA2 [SP|Q42522]
Length = 472
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Frame = +2
Query: 221 KPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRH 400
+PV++ + D DG Y+D G +GH +V AAL + + +
Sbjct: 79 QPVVMDSAKGSRIRDIDGNEYIDYVGSWGPAIIGHADDEVLAALAETMK----KGTSFGA 134
Query: 401 PKIYEYV--EQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYT 574
P + E V E + + +P + +V VNSG+EA LA+A+TG I + YHG+
Sbjct: 135 PCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTGKQKFIKFEGCYHGHA 193
Query: 575 SSLM 586
+S +
Sbjct: 194 NSFL 197
>At5g63570.1 68418.m07979 glutamate-1-semialdehyde 2,1-aminomutase 1
(GSA 1) / glutamate-1-semialdehyde aminotransferase 1
(GSA-AT 1) identical to GSA 1 [SP|P42799]
Length = 474
Score = 50.4 bits (115), Expect = 1e-06
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Frame = +2
Query: 221 KPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRH 400
+PVL+ ++D DG Y+D G +GH +V AAL + + +
Sbjct: 81 QPVLIDSVKGSKMWDIDGNEYIDYVGSWGPAIIGHADDEVLAALAETMK----KGTSFGA 136
Query: 401 PKIYEYV--EQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYT 574
P + E V E + + +P + +V VNSG+EA LA+A+T I + YHG+
Sbjct: 137 PCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTNKEKFIKFEGCYHGHA 195
Query: 575 SSLM 586
++ +
Sbjct: 196 NAFL 199
>At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase /
gamma-amino-N-butyrate transaminase / GABA transaminase
/ beta-alanine--oxoglutarate aminotransferase identical
to gamma-aminobutyrate transaminase subunit precursor
[Arabidopsis thaliana] (EC 2.6.1.19) GI:14030435;
contains Pfam profile PF00202: aminotransferase, class
III; identical to cDNA gamma-aminobutyrate transaminase
subunit precursor, nuclear gene for mitochondrial
product GI:14030434
Length = 504
Score = 45.6 bits (103), Expect = 3e-05
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Frame = +2
Query: 224 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL--WHT-TNLY 394
P+++ + ++YD+ GK+YLD G+ ++G P++ +A +QL+ L +H+ N
Sbjct: 70 PLVIAKSEGSYVYDDTGKKYLDSLAGLWCTALGGNEPRLVSAAVEQLNTLPFYHSFWNRT 129
Query: 395 RHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNL------DIISLQT 556
P + L + + + GS+AN+ L Y L I+ +
Sbjct: 130 TKPSLDLAKVLLEMFTANKMAKAFFTSGGSDANDTQVKLVWYYNNALGRPEKKKFIARKK 189
Query: 557 SYHGYT---SSLMGL 592
SYHG T +SL GL
Sbjct: 190 SYHGSTLISASLSGL 204
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 458 VVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYT-SSLMGLTATQSYR 613
+V L + S L TLL+K T NLD L GY+ S L T +YR
Sbjct: 579 MVGLPSVESREKILRTLLSKEKTENLDFQELAQMTDGYSGSDLKNFCTTAAYR 631
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +2
Query: 98 YSTAKMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLL 235
Y+ +PP + P Y P+ VY P Y KP LL
Sbjct: 75 YTKPTLPPPAYTPPVYNKPTLPAPVYTPPVYKPTLSPPVYTKPTLL 120
>At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing
protein
Length = 527
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 262 RQRRQEIPGSVRWNRHRLRGPLSSESKCSPQRSTRCIVAYDQPVQTSE 405
R RR+E V R E + P+R R + AY P++ +E
Sbjct: 134 RSRREEKEPEVVERGSRRHRDKKDEPEADPERDQRTVFAYQMPLKATE 181
>At3g26190.1 68416.m03268 cytochrome P450 71B21, putative (CYP71B21)
identical to Cytochrome P450 71B21 (SP:Q9LTM2)
[Arabidopsis thaliana]; similar to cytochrome P450
GB:O65784 [Arabidopsis thaliana]
Length = 499
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 362 LDVLWHTTNLYRHPKIYEYVEQLAAKLPGD 451
+ ++W T L RHP++ + ++Q +L GD
Sbjct: 308 ITMIWALTELTRHPRVMKKLQQEIRELLGD 337
>At1g16720.1 68414.m02005 expressed protein
Length = 598
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +2
Query: 407 IYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYT 574
++EY++ L A D +V SG EAN +L KA D SL+ S GYT
Sbjct: 454 VFEYIKALPAGQETDFILVSCTGSGVEANRREQVL-KAKRAGED--SLRRSGLGYT 506
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,669,497
Number of Sequences: 28952
Number of extensions: 329271
Number of successful extensions: 952
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -