SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30851
         (627 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g39660.1 68417.m05608 alanine--glyoxylate aminotransferase, p...   193   9e-50
At3g08860.1 68416.m01030 alanine--glyoxylate aminotransferase, p...   171   4e-43
At2g38400.1 68415.m04717 alanine--glyoxylate aminotransferase, p...   167   7e-42
At1g80600.1 68414.m09457 acetylornithine aminotransferase, mitoc...    69   3e-12
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ...    64   7e-11
At3g48730.1 68416.m05321 glutamate-1-semialdehyde 2,1-aminomutas...    53   2e-07
At5g63570.1 68418.m07979 glutamate-1-semialdehyde 2,1-aminomutas...    50   1e-06
At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase / gamm...    46   3e-05
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains...    28   4.4  
At1g54970.1 68414.m06278 proline-rich family protein similar to ...    28   4.4  
At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing ...    28   5.8  
At3g26190.1 68416.m03268 cytochrome P450 71B21, putative (CYP71B...    28   5.8  
At1g16720.1 68414.m02005 expressed protein                             28   5.8  

>At4g39660.1 68417.m05608 alanine--glyoxylate aminotransferase,
           putative / beta-alanine-pyruvate aminotransferase,
           putative / AGT, putative similar to SP|Q64565
           Alanine--glyoxylate aminotransferase 2, mitochondrial
           precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
           aminotransferase) {Rattus norvegicus}; contains Pfam
           profile PF00202: aminotransferase, class III
          Length = 476

 Score =  193 bits (470), Expect = 9e-50
 Identities = 86/171 (50%), Positives = 123/171 (71%)
 Frame = +2

Query: 113 MPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDL 292
           +PP    PRPY GPS  +V Q +  ++ PS+ + Y+KP+ + +G MQ+LYD  G+RYLD 
Sbjct: 41  IPPFVHQPRPYKGPSADEVLQKRKKFLGPSLFHYYQKPLNIVEGKMQYLYDESGRRYLDA 100

Query: 293 FGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLV 472
           F GIVTVS GHCHP +  A+ +Q  +L H T +Y H  I ++ E LAAK+PG+L VVY V
Sbjct: 101 FAGIVTVSCGHCHPDILNAITEQSKLLQHATTIYLHHAIGDFAEALAAKMPGNLKVVYFV 160

Query: 473 NSGSEANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAIP 625
           NSGSEANELA ++A+ YTG+L++ISL+ +YHG +S+ +GLTA  +++  +P
Sbjct: 161 NSGSEANELAMMMARLYTGSLEMISLRNAYHGGSSNTIGLTALNTWKYPLP 211


>At3g08860.1 68416.m01030 alanine--glyoxylate aminotransferase,
           putative / beta-alanine-pyruvate aminotransferase,
           putative / AGT, putative similar to similar to SP|Q64565
           Alanine--glyoxylate aminotransferase 2, mitochondrial
           precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
           aminotransferase) {Rattus norvegicus}; contains Pfam
           profile PF00202: aminotransferase, class III
          Length = 481

 Score =  171 bits (415), Expect = 4e-43
 Identities = 75/171 (43%), Positives = 116/171 (67%)
 Frame = +2

Query: 110 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLD 289
           KMPP ++ P PY GPS  ++   +  ++ P++ + Y  P+ + +  MQ+++D +G+RYLD
Sbjct: 45  KMPPFNYSPPPYDGPSTAEIIAKRREFLSPALFHFYNTPLNIVEAKMQYVFDENGRRYLD 104

Query: 290 LFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYL 469
            FGGI TVS GHCHP+V  ++  QL ++ H+T LY +  I ++ E L + LPGDL VV+ 
Sbjct: 105 AFGGIATVSCGHCHPEVVNSVVKQLKLINHSTILYLNHTISDFAEALVSTLPGDLKVVFF 164

Query: 470 VNSGSEANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAI 622
            NSG+EANELA ++A+ YTG  DI+SL+ SYHG  ++ MG TA  +++  +
Sbjct: 165 TNSGTEANELAMMMARLYTGCNDIVSLRNSYHGNAAATMGATAQSNWKFNV 215


>At2g38400.1 68415.m04717 alanine--glyoxylate aminotransferase,
           putative / beta-alanine-pyruvate aminotransferase,
           putative / AGT, putative similar to SP|Q64565
           Alanine--glyoxylate aminotransferase 2, mitochondrial
           precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
           aminotransferase) {Rattus norvegicus}; contains Pfam
           profile PF00202: aminotransferase, class III
          Length = 477

 Score =  167 bits (405), Expect = 7e-42
 Identities = 75/172 (43%), Positives = 110/172 (63%)
 Frame = +2

Query: 107 AKMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYL 286
           A++PP  + P PYTGPS   +   +  ++ PS+   Y+KP+ +  G MQ+L+D  G+RYL
Sbjct: 41  ARLPPFAYTPPPYTGPSADVILSKRKEFLSPSMFCLYRKPLNIVDGKMQYLFDESGRRYL 100

Query: 287 DLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVY 466
           D F GI  V+ GHCHP V   + +Q+  L H T LY +  I ++ E LA+KLPGDL VV+
Sbjct: 101 DAFAGIAVVNCGHCHPDVVEPVINQIKRLQHPTVLYLNHAIADFSEALASKLPGDLKVVF 160

Query: 467 LVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAI 622
             NSG+EANELA ++AK YTG  DI++++  YHG  ++ MG T    ++  +
Sbjct: 161 FTNSGTEANELALMMAKLYTGCQDIVAVRNGYHGNAAATMGATGQSMWKFNV 212


>At1g80600.1 68414.m09457 acetylornithine aminotransferase,
           mitochondrial, putative / acetylornithine transaminase,
           putative / AOTA, putative / ACOAT, putative similar to
           SP|O04866 Acetylornithine aminotransferase,
           mitochondrial precursor (EC 2.6.1.11) (ACOAT)
           (Acetylornithine transaminase) (AOTA) {Alnus glutinosa};
           contains Pfam profile PF00202: aminotransferase, class
           III
          Length = 457

 Score = 68.5 bits (160), Expect = 3e-12
 Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
 Frame = +2

Query: 218 KKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYR 397
           + PV+L+ G    L+D +GK YLD   GI   ++GH  P    A+ +Q  VL H +N+Y 
Sbjct: 75  RAPVVLSSGKGCKLFDPEGKEYLDCASGIAVNALGHGDPDWLRAVTEQAGVLAHVSNVYY 134

Query: 398 HPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAK---AYTGNLD------IISL 550
                E  ++L A    D   V+  NSG+EANE A   ++    +T   D       I+ 
Sbjct: 135 TIPQIELAKRLVASSFADR--VFFCNSGTEANEAAIKFSRKFQRFTHPEDKEVATGFIAF 192

Query: 551 QTSYHGYTSSLMGLTATQSYR 613
             S+HG T   + LT+ + YR
Sbjct: 193 TNSFHGRTLGALALTSKEQYR 213


>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
           ornithine--oxo-acid aminotransferase, putative similar
           to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
           (Ornithine--oxo-acid aminotransferase) [Aspergillus
           nidulans] {Emericella nidulans}; contains Pfam profile
           PF00202: aminotransferase, class III
          Length = 475

 Score = 64.1 bits (149), Expect = 7e-11
 Identities = 33/108 (30%), Positives = 60/108 (55%)
 Frame = +2

Query: 200 SITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWH 379
           S  N +  PV+ ++ +   ++D +GKRY+D       V+ GHCHPK+  AL++Q++ L  
Sbjct: 51  SAHNYHPVPVVFSRANGSTIWDPEGKRYIDFLAAYSAVNQGHCHPKIMKALQEQVEKLTL 110

Query: 380 TTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY 523
           ++  + + K   + E+L      D+  V  +N+G+E  E A  LA+ +
Sbjct: 111 SSRAFYNDKFPVFAERLTNMFGYDM--VLPMNTGAEGVETALKLARKW 156


>At3g48730.1 68416.m05321 glutamate-1-semialdehyde 2,1-aminomutase 2
           (GSA 2) / glutamate-1-semialdehyde aminotransferase 2
           (GSA-AT 2) identical to GSA2 [SP|Q42522]
          Length = 472

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
 Frame = +2

Query: 221 KPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRH 400
           +PV++       + D DG  Y+D  G      +GH   +V AAL + +         +  
Sbjct: 79  QPVVMDSAKGSRIRDIDGNEYIDYVGSWGPAIIGHADDEVLAALAETMK----KGTSFGA 134

Query: 401 PKIYEYV--EQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYT 574
           P + E V  E + + +P  + +V  VNSG+EA      LA+A+TG    I  +  YHG+ 
Sbjct: 135 PCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTGKQKFIKFEGCYHGHA 193

Query: 575 SSLM 586
           +S +
Sbjct: 194 NSFL 197


>At5g63570.1 68418.m07979 glutamate-1-semialdehyde 2,1-aminomutase 1
           (GSA 1) / glutamate-1-semialdehyde aminotransferase 1
           (GSA-AT 1) identical to GSA 1 [SP|P42799]
          Length = 474

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
 Frame = +2

Query: 221 KPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRH 400
           +PVL+       ++D DG  Y+D  G      +GH   +V AAL + +         +  
Sbjct: 81  QPVLIDSVKGSKMWDIDGNEYIDYVGSWGPAIIGHADDEVLAALAETMK----KGTSFGA 136

Query: 401 PKIYEYV--EQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYT 574
           P + E V  E + + +P  + +V  VNSG+EA      LA+A+T     I  +  YHG+ 
Sbjct: 137 PCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTNKEKFIKFEGCYHGHA 195

Query: 575 SSLM 586
           ++ +
Sbjct: 196 NAFL 199


>At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase /
           gamma-amino-N-butyrate transaminase / GABA transaminase
           / beta-alanine--oxoglutarate aminotransferase identical
           to gamma-aminobutyrate transaminase subunit precursor
           [Arabidopsis thaliana] (EC 2.6.1.19) GI:14030435;
           contains Pfam profile PF00202: aminotransferase, class
           III; identical to cDNA gamma-aminobutyrate transaminase
           subunit precursor, nuclear gene for mitochondrial
           product GI:14030434
          Length = 504

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
 Frame = +2

Query: 224 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL--WHT-TNLY 394
           P+++ +    ++YD+ GK+YLD   G+   ++G   P++ +A  +QL+ L  +H+  N  
Sbjct: 70  PLVIAKSEGSYVYDDTGKKYLDSLAGLWCTALGGNEPRLVSAAVEQLNTLPFYHSFWNRT 129

Query: 395 RHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNL------DIISLQT 556
             P +      L       +   +  + GS+AN+    L   Y   L        I+ + 
Sbjct: 130 TKPSLDLAKVLLEMFTANKMAKAFFTSGGSDANDTQVKLVWYYNNALGRPEKKKFIARKK 189

Query: 557 SYHGYT---SSLMGL 592
           SYHG T   +SL GL
Sbjct: 190 SYHGSTLISASLSGL 204


>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
           Pfam domain, PF00004: ATPase, AAA family
          Length = 726

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +2

Query: 458 VVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYT-SSLMGLTATQSYR 613
           +V L +  S    L TLL+K  T NLD   L     GY+ S L     T +YR
Sbjct: 579 MVGLPSVESREKILRTLLSKEKTENLDFQELAQMTDGYSGSDLKNFCTTAAYR 631


>At1g54970.1 68414.m06278 proline-rich family protein similar to
           proline-rich protein GI:170048 from [Glycine max]
          Length = 335

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +2

Query: 98  YSTAKMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLL 235
           Y+   +PP  + P  Y  P+         VY P      Y KP LL
Sbjct: 75  YTKPTLPPPAYTPPVYNKPTLPAPVYTPPVYKPTLSPPVYTKPTLL 120


>At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing
           protein
          Length = 527

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = +1

Query: 262 RQRRQEIPGSVRWNRHRLRGPLSSESKCSPQRSTRCIVAYDQPVQTSE 405
           R RR+E    V     R       E +  P+R  R + AY  P++ +E
Sbjct: 134 RSRREEKEPEVVERGSRRHRDKKDEPEADPERDQRTVFAYQMPLKATE 181


>At3g26190.1 68416.m03268 cytochrome P450 71B21, putative (CYP71B21)
           identical to Cytochrome P450 71B21 (SP:Q9LTM2)
           [Arabidopsis thaliana]; similar to cytochrome P450
           GB:O65784 [Arabidopsis thaliana]
          Length = 499

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +2

Query: 362 LDVLWHTTNLYRHPKIYEYVEQLAAKLPGD 451
           + ++W  T L RHP++ + ++Q   +L GD
Sbjct: 308 ITMIWALTELTRHPRVMKKLQQEIRELLGD 337


>At1g16720.1 68414.m02005 expressed protein
          Length = 598

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 21/56 (37%), Positives = 28/56 (50%)
 Frame = +2

Query: 407 IYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYT 574
           ++EY++ L A    D  +V    SG EAN    +L KA     D  SL+ S  GYT
Sbjct: 454 VFEYIKALPAGQETDFILVSCTGSGVEANRREQVL-KAKRAGED--SLRRSGLGYT 506


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,669,497
Number of Sequences: 28952
Number of extensions: 329271
Number of successful extensions: 952
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -