Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30850
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    24   1.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   1.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.7  
AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochr...    23   2.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.3  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 531 YLIINYFGNTCSR*RLNYIIYNNSRC 608
           YL+I    +  S  R NY++ NNS C
Sbjct: 377 YLVIFIQFDQSSNSRNNYVLTNNSTC 402


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +2

Query: 317 EFSYSNLVALRYLKLLV 367
           EF+Y N++ ++YL +++
Sbjct: 337 EFTYENILGMKYLDMVI 353


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 308 AVPEAVIVTAPEAETAITTGSPTVD 234
           +VPE  I T P  E A    +P+ D
Sbjct: 398 SVPEPTISTTPRPEWARPPSTPSAD 422


>AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 63

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +2

Query: 323 SYSNLVALRYLKLLVQPQPRL 385
           SYS+L  ++YL+L+++   RL
Sbjct: 39  SYSDLQEMKYLELVIKEALRL 59


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 483 IYNHSRCCNN 512
           IYN  +CC N
Sbjct: 791 IYNEKQCCKN 800



 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 588 IYNNSRCCNN 617
           IYN  +CC N
Sbjct: 791 IYNEKQCCKN 800


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,049
Number of Sequences: 336
Number of extensions: 2242
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)