Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30850
(619 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6) 33 0.19
SB_7689| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13) 32 0.43
SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_30512| Best HMM Match : GLTT (HMM E-Value=0.00058) 31 0.99
SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_22648| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 2.3
SB_22693| Best HMM Match : DUF1042 (HMM E-Value=0.00027) 28 5.3
SB_11880| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.92) 28 5.3
SB_37759| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_50604| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_46977| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.9e-09) 27 9.2
SB_41629| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_39751| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_33380| Best HMM Match : Herpes_capsid (HMM E-Value=3) 27 9.2
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_36316| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.5e-11) 27 9.2
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 27 9.2
SB_17403| Best HMM Match : I-set (HMM E-Value=0) 27 9.2
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6)
Length = 269
Score = 33.1 bits (72), Expect = 0.19
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 600
T A+S+ + A A + + TTTA AAT T T++ T+ T A V + T+ T
Sbjct: 118 TAAASVAATAAAAATAAATATATTTATAATATAAATATATGTTTAT-ATVTATATATVTA 176
Query: 601 AGAAT 615
A AT
Sbjct: 177 AATAT 181
>SB_7689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 612
Score = 32.3 bits (70), Expect = 0.32
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +1
Query: 412 LELTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTL 561
L+L SSL T++ LAP S TTT A +++L D SSL+ S+ L
Sbjct: 362 LKLAPFSSLTTAIKLAP----FSSLTTTLQACSLLLPYYDPSSLLPSLPL 407
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 31.9 bits (69), Expect = 0.43
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 4/131 (3%)
Frame = +1
Query: 235 STVGDPVVIAVSASGAVTITASGTASARIFVLKSCGASV-FKXXXXXXXXXXXXXXXXXX 411
STV V +A+ VT T + ASA V + A+V
Sbjct: 187 STVTATVTATATATATVTATVTAAASATAAVTATVTATVTVTVTATAATTVTATVTAATT 246
Query: 412 LELT---NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSI 582
+ +T A++ +T A V ++ + T T+ + T T ++I +VT A + ++
Sbjct: 247 VTVTVTATAATTVTVTVTATVTATVTATVTVTATTTVTVTATATVTVIVTVT-ATLAVTV 305
Query: 583 TSFTTTAGAAT 615
T T TA AAT
Sbjct: 306 T-VTETAAAAT 315
>SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13)
Length = 1027
Score = 31.9 bits (69), Expect = 0.43
Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 4/123 (3%)
Frame = +1
Query: 259 IAVSASGAVTITASGTASARIFVLKSCGASVFKXXXXXXXXXXXXXXXXXXLELTNASSL 438
+ + A T+T TA+A + + + A++ +T A++
Sbjct: 597 VTTVTTAAATVTTVATAAATVTTVTTAAATLTTVTTAAATLTTVTTAAATLTTVTTAAAT 656
Query: 439 ITSVA--LAPVEDSIGSFTT-TAGAATIVLEPTDTSSLIT-SVTLAPVEDSITSFTTTAG 606
+T+ A + V + + TT T AAT+ ++L T + TL V + + TT A
Sbjct: 657 LTTAAATVTTVTTAAATLTTVTTAAATLTTVTIAAATLTTAAATLTTVTTAAATVTTAAA 716
Query: 607 AAT 615
T
Sbjct: 717 TTT 719
>SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 31.9 bits (69), Expect = 0.43
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 418 LTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPT--DTSSLITSVTLAPVEDSITSF 591
+TNA + T+ LA + + TTT A+T T T+S+ T+ E+S T+
Sbjct: 219 MTNAPKITTTEQLATTTAAETTPTTTTSASTTTATTTKATTTSVSTTTATTKEEESTTTA 278
Query: 592 TTTAGAAT 615
TT AT
Sbjct: 279 ETTTVTAT 286
>SB_30512| Best HMM Match : GLTT (HMM E-Value=0.00058)
Length = 1083
Score = 30.7 bits (66), Expect = 0.99
Identities = 24/68 (35%), Positives = 32/68 (47%)
Frame = -3
Query: 617 IVAAPAVVVNDVIESSTGASVTEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVI 438
IVAA +V VI ++T V V+ V T+V A VVV ++T SA V+
Sbjct: 769 IVAATVIVAATVIVAATVVVVATVVVVATVVVVATVVVAATVVV--VAAAATATSAVAVV 826
Query: 437 NDEALVSS 414
D SS
Sbjct: 827 IDTVAASS 834
>SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2147
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 430 SSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDT-SSLITSVTLAPVEDSITSFTTTAG 606
SS +TSV P + S T + + + ++ SS +TSVT P +TS T +
Sbjct: 961 SSQVTSVTQNPPSSQVTSVTQESHSTQVTSATQESRSSQVTSVTQEPPSSQVTSVTQESR 1020
Query: 607 AATI 618
++ +
Sbjct: 1021 SSQV 1024
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 430 SSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDT-SSLITSVTLAPVEDSITSFT 594
SS +TSV P + S T + + + ++ SS +TSVT P +TS T
Sbjct: 889 SSQVTSVTQEPPSSQVTSVTQESPSTQVTSATQESPSSQVTSVTQEPPSTQVTSVT 944
>SB_22648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 600
T +S TS + S + TTT+ T T TS+ TS T + + + TTT
Sbjct: 23 TTNTSTTTSTTTSTTNTSTTTSTTTSTTNTSTTTSTTTSTTNTSTTTSTTTSTTNTSTTT 82
Query: 601 AGAAT 615
+ T
Sbjct: 83 STTTT 87
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 600
T +S TS + S + TTT+ T T TS+ TS T + + + TTT
Sbjct: 10 TTNTSTTTSTTTSTTNTSTTTSTTTSTTNTSTTTSTTTSTTNTSTTTSTTTSTTNTSTTT 69
Query: 601 A 603
+
Sbjct: 70 S 70
>SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 427 ASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTA 603
+S TS P+E S+ + +TT+ A V + TSV + +E S+ + +TT+
Sbjct: 487 SSMATTSTTSTPLESSMTTNSTTSTLAEAVATSSPVLPTTTSVLTSSMESSMATTSTTS 545
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 430 SSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTAGA 609
S+L+ AP + ++ TT T + P T +T T APV+ T TTA A
Sbjct: 1642 STLVPETTFAP-DTTVAPETTVMPDTT--MRPPKTDVFVTEATKAPVDQLKTKQPTTATA 1698
Query: 610 AT 615
T
Sbjct: 1699 KT 1700
>SB_22693| Best HMM Match : DUF1042 (HMM E-Value=0.00027)
Length = 2261
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 596 VVNDVIESS-TGASVTEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATE 444
+V++ IE++ G +VTE D + V P+ VN P ++ TG S E
Sbjct: 841 LVSEAIEANKNGETVTEPDPDPEEPKKMSTVEPPSAGVNKPEDTPTGGSRAE 892
>SB_11880| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.92)
Length = 425
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 433 SLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITS--FTTTAG 606
++ T+ A + TTT AA + + T T++ +T+ T A E + T+ TTTA
Sbjct: 313 TMTTTAAEVTTTTTATEVTTTTTAAEVTM--TTTAAEVTTTTAAAAEATTTAAEATTTAA 370
Query: 607 AAT 615
AT
Sbjct: 371 EAT 373
>SB_37759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +1
Query: 430 SSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTAGA 609
++L+T+ + D I TTT T+ T++L+T+ + + T TTT
Sbjct: 101 TTLVTTTLVTTTLDIITLITTTLDITTLATTTLATTTLVTTTLVITTLVTTTLVTTTLVI 160
Query: 610 ATI 618
T+
Sbjct: 161 TTL 163
>SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/60 (23%), Positives = 25/60 (41%)
Frame = +1
Query: 436 LITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTAGAAT 615
++T+ + + TTTA + T T++ T+ T + T+ TTT T
Sbjct: 3 IVTTTTTTTTTTTTTTTTTTAATTATITTATATTTTTTTTTTTTTTTTTTTTTTTTTTTT 62
>SB_50604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +1
Query: 442 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTAGA 609
++ L+ V +I + A T +L+P T++++ A + + T+ TTA A
Sbjct: 155 SATELSTVVKTISTTKLQPVATTTILQPVATTTILVEAATATITTTTTAEATTARA 210
>SB_46977| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.9e-09)
Length = 549
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +3
Query: 399 YFNSFRAHQCLVINYFG--STCSR*RLNWIIYNHSRCCNNSFGTHRYLIINYFGNTCSR* 572
Y N +CL I Y T S R+NW + + + F L I + G+ S
Sbjct: 181 YTNDDCGEKCLTIIYSVPMGTTSETRVNWFWFTRTVPGHYEFPIDFELYIQHEGSNVSNW 240
Query: 573 RLNYIIYNNSR 605
+ I+YN+ +
Sbjct: 241 NVEKIVYNDQK 251
>SB_41629| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 463 VEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSIT 585
+E SIGS + A + LE + + L T+A + DSIT
Sbjct: 119 MEHSIGSIVSKIDAVLVKLEAMEKAKLKRRETMAKLLDSIT 159
>SB_39751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 517 LEPTDTSSLITSVTLAPVEDSITSFTTTAGAATI 618
L T ++ ITS+ + S T+ T+TA AAT+
Sbjct: 82 LSTTTINNKITSIKTTSLSTSSTTITSTAAAATV 115
>SB_33380| Best HMM Match : Herpes_capsid (HMM E-Value=3)
Length = 474
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = -3
Query: 575 SSTGASVTEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVINDEALVSS 414
S++ A+ T + VS S + A+ ++ P + A+ATE +DEA++ S
Sbjct: 148 STSSAASTSLTTSPVSTSSTSSAASTSLT---PAPNILSAAATECYSDEAIIPS 198
>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFT-TTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTT 597
T + + TS P S+T TT+ +T PT + + TS T S TS+TT
Sbjct: 23 TTSYTSTTSYTPTPSYTPTTSYTSTTSYTSTTSYTPTPSYTPTTSYTTTTSYTSTTSYTT 82
Query: 598 T 600
T
Sbjct: 83 T 83
>SB_36316| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.5e-11)
Length = 632
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +3
Query: 399 YFNSFRAHQCLVINYFG--STCSR*RLNWIIYNHSRCCNNSFGTHRYLIINYFGNTCSR* 572
Y N +CL I Y T S R+NW + + + F L I + G+ S
Sbjct: 307 YTNDDCGEKCLTIIYSVPMGTTSETRVNWFWFTRTVPGHYEFPIDFELYIQHEGSNVSNW 366
Query: 573 RLNYIIYNNSR 605
+ I+YN+ +
Sbjct: 367 NVEKIVYNDQK 377
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 27.5 bits (58), Expect = 9.2
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 412 LELTNASSLITSVALAPVEDSIGSFTTTAGAATI----VLEPTDTSSLITSVTLAPVEDS 579
++ TN+ T L+ D++G+ TT A +A I +P D SS+ITS V +
Sbjct: 792 IDNTNSQKSDTDRKLS--SDTLGTLTTMAISAAISSSSATKPLDVSSVITSEFTKAVAST 849
Query: 580 ITSFT 594
I + T
Sbjct: 850 IMTIT 854
>SB_17403| Best HMM Match : I-set (HMM E-Value=0)
Length = 671
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 421 TNASSLITSVAL-APVEDSIGSFTTTAGAATIVLEPTDTSS 540
+NA++++T +A APV D I TTT TIVL T +
Sbjct: 573 SNATAMVTIIAFTAPVFDVIQPNTTTNETDTIVLHCNATGN 613
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 27.5 bits (58), Expect = 9.2
Identities = 21/65 (32%), Positives = 28/65 (43%)
Frame = +1
Query: 421 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 600
T +SL+T+ AP + TT AAT L T + S+ E + S TT
Sbjct: 270 TTTASLVTT---APEATTAPEATTAPEAATASLVTTAPEATTASLLTTAPETTTASLVTT 326
Query: 601 AGAAT 615
A AT
Sbjct: 327 APEAT 331
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,027,961
Number of Sequences: 59808
Number of extensions: 256700
Number of successful extensions: 872
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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