Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30849
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    29   0.037
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    26   0.35 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   1.1  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   4.3  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   4.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.3  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   7.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   9.8  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 29.1 bits (62), Expect = 0.037
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query: 333 RIQSIVTKDYFRFYKVNLKKE-CPFWADDSRCAMKYCHIKTCTKESVPGYETGYNNEYVD 509
           R+     K +F+  +V  KKE  P  A  +    K C ++TC+    P +E    +E +D
Sbjct: 155 RLSEKQVKIWFQNRRVKYKKEDLPAAAGKASNGNKCCCLRTCSSAKRPKFENSSCDEDID 214

Query: 510 ET 515
            T
Sbjct: 215 VT 216


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 576 PQLSYLNMTISAANQYEIAKWKVHDDAHDNFCESDDRDAD 695
           P LS L  T+S  ++YE    K+  + H++  + DD D D
Sbjct: 261 PGLSPLGHTLSMNHKYE----KIDKEEHESMDDDDDDDDD 296


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 639 KVHDDAHDNFCESDDRDAD 695
           ++HD + D FC  D+R  D
Sbjct: 543 QIHDLSPDQFCNGDNRPPD 561



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -2

Query: 507 LHTHYYIQFHSQVHFPSCKSLYGSISLH 424
           +H    + +    HFP C +    ISLH
Sbjct: 685 IHVGTQLIYRPFSHFPRCGNHLPPISLH 712


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 43  LVYHTYITVVYVRSEATFVSAIILMSWR 126
           +VY  +I V    S AT +S + ++SW+
Sbjct: 215 MVYLQHIFVKSRPSPATIISNVTVISWQ 242


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 43  LVYHTYITVVYVRSEATFVSAIILMSWR 126
           +VY  +I V    S AT +S + ++SW+
Sbjct: 215 MVYLQHIFVKSRPSPATIISNVTVISWQ 242


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 43  LVYHTYITVVYVRSEATFVSAIILMSWR 126
           +VY  +I V    S AT +S + ++SW+
Sbjct: 535 MVYLQHIFVKSRPSPATIISNVTVISWQ 562


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 314 IEEVNCVDFTGAVPQG 267
           I ++ CVDF G +P G
Sbjct: 197 IGDLVCVDFYGPLPTG 212


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -3

Query: 362 VVFRDYTLDAGKDLHIIEEV 303
           +VF++  LD    +H++EE+
Sbjct: 514 IVFQNSGLDKADMVHLVEEI 533


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 243 LYCRKASLAPCRNQPPVL 190
           L+C   +LA  RN+ P+L
Sbjct: 6   LFCVLVTLATARNKAPLL 23


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 5/20 (25%), Positives = 11/20 (55%)
 Frame = -3

Query: 674 FTKIIMCIIVNFPFCYFILV 615
           +   ++  +   PFC+F+ V
Sbjct: 177 YVSYLLIFVQQIPFCFFVRV 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,237
Number of Sequences: 336
Number of extensions: 3581
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)