BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30849 (709 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_22012| Best HMM Match : ERO1 (HMM E-Value=0) 53 3e-07 SB_9861| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52 SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 30 1.6 SB_33735| Best HMM Match : Aminotran_1_2 (HMM E-Value=0.13) 30 2.1 SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8 SB_14778| Best HMM Match : MH1 (HMM E-Value=2.8026e-45) 29 3.7 SB_12549| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7 SB_52866| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9 SB_12855| Best HMM Match : TPR_2 (HMM E-Value=2.3e-12) 28 6.5 SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5 SB_17612| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5 SB_10009| Best HMM Match : CPL (HMM E-Value=2.5) 28 8.5 >SB_22012| Best HMM Match : ERO1 (HMM E-Value=0) Length = 400 Score = 52.8 bits (121), Expect = 3e-07 Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 1/172 (0%) Frame = +3 Query: 171 ILFALAIVQAVGYDTELTKPCD-STACFDELHGSLGDCSCKVDTIDFFNNVKIFPRIQSI 347 I + + V V E+ +P S CF +L G + C C V+T+D NN KI P + + Sbjct: 3 IAISTSFVYLVCLLREIVEPAGLSDQCFCKLKGKVEQCCCDVETVDKINN-KIHPILDEL 61 Query: 348 VTKDYFRFYKVNLKKECPFWADDSRCAMKYCHIKTCTKESVPGYETGYNNEYVDETPATK 527 V ++YF+F++ + + + K + +TC + S T N +D+T +TK Sbjct: 62 VKRNYFKFFRTS-----NYIMIEITFTFKGKYGETCQESS----NTTLGN--LDDTISTK 110 Query: 528 YSKEAQSDCKSDLDHDPQLSYLNMTISAANQYEIAKWKVHDDAHDNFCESDD 683 K S K L D W+ HD+ +NFC DD Sbjct: 111 GLKSFMSSAKDKLAFD-------------------TWRQHDNVEENFCALDD 143 >SB_9861| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 377 Score = 31.9 bits (69), Expect = 0.52 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 2/112 (1%) Frame = +3 Query: 312 NNVKIFPRIQSIVTKDYFRFYKVNLKKECPFWADDSRCAMKYCHIKTCTKESVPGYETGY 491 +N +F + + I+++ Y++F V + ++C ++ DD + H + T SVP Y Sbjct: 196 DNKYVFKQHKLILSR-YYKFSLVFMNQDCDYFVDD-----RLYH--SLTSGSVPVY---M 244 Query: 492 NNEYVDE-TPAT-KYSKEAQSDCKSDLDHDPQLSYLNMTISAANQYEIAKWK 641 ++ VD+ P K S SD K + L+YL +A N+Y KWK Sbjct: 245 GSDKVDQFLPGNLKNSIIKVSDFKGPKELAEYLNYLMTNETAYNKYLEWKWK 296 >SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) Length = 942 Score = 30.3 bits (65), Expect = 1.6 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 1/87 (1%) Frame = +3 Query: 444 IKTCTKESVPGYETGYNNEYVDETPATKYSKEAQSDCKSDLDHDPQLSYLNMTISAANQY 623 +K C E + E DE + S ++SD D D S + + +++ Sbjct: 553 VKECKGEEEQNKTDSSSEESEDELETSDDSSSSESDTSDDESDDDHKSEKSSIATDTSEH 612 Query: 624 EI-AKWKVHDDAHDNFCESDDRDADAD 701 + DD+ D +SDD +D+D Sbjct: 613 PSDSSSDSGDDSDDESSDSDDEPSDSD 639 >SB_33735| Best HMM Match : Aminotran_1_2 (HMM E-Value=0.13) Length = 383 Score = 29.9 bits (64), Expect = 2.1 Identities = 9/29 (31%), Positives = 18/29 (62%) Frame = -2 Query: 483 FHSQVHFPSCKSLYGSISLHTYCHQPRTG 397 FH+++ SC ++YG +++ C P+ G Sbjct: 226 FHNRMTLYSCPNIYGQVAMGIVCQPPKPG 254 >SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2162 Score = 29.5 bits (63), Expect = 2.8 Identities = 19/60 (31%), Positives = 32/60 (53%) Frame = +3 Query: 231 CDSTACFDELHGSLGDCSCKVDTIDFFNNVKIFPRIQSIVTKDYFRFYKVNLKKECPFWA 410 CD TAC D+ + +C CK +D FNN + S+V K + + +VN + + F++ Sbjct: 788 CDKTACSDKGY----ECFCKSGFLDVFNNTWFY----SLVCKSFGQ--RVNQQFQIDFFS 837 >SB_14778| Best HMM Match : MH1 (HMM E-Value=2.8026e-45) Length = 1133 Score = 29.1 bits (62), Expect = 3.7 Identities = 18/70 (25%), Positives = 33/70 (47%) Frame = +3 Query: 366 RFYKVNLKKECPFWADDSRCAMKYCHIKTCTKESVPGYETGYNNEYVDETPATKYSKEAQ 545 +F +V +++E + D S + + C K S+ G Y++ +P K K + Sbjct: 751 KFDEVKIQEELSTFYDPSSITLASDY--ACFKYSMGGNLKLYDDHIALSSPKRKIKKPSY 808 Query: 546 SDCKSDLDHD 575 S CK+ D+D Sbjct: 809 SPCKTGSDYD 818 >SB_12549| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 565 Score = 29.1 bits (62), Expect = 3.7 Identities = 14/50 (28%), Positives = 22/50 (44%) Frame = +3 Query: 552 CKSDLDHDPQLSYLNMTISAANQYEIAKWKVHDDAHDNFCESDDRDADAD 701 C + + H P YL++ + N A V++D D+ D D D D Sbjct: 88 CDNSVPHKPHRQYLHLRLYLVNDRYNAAAAVNEDNDDDGDGDGDSDGDGD 137 >SB_52866| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1376 Score = 28.7 bits (61), Expect = 4.9 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 5/38 (13%) Frame = +3 Query: 342 SIVTKDYFRFY----KVNLKKECPFWADDSR-CAMKYC 440 SI+T+ Y +FY K+ +K C F+ D + A KYC Sbjct: 589 SIITQKYCKFYLRDGKLAAQKYCKFYLRDGKLAAQKYC 626 Score = 28.7 bits (61), Expect = 4.9 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 5/38 (13%) Frame = +3 Query: 342 SIVTKDYFRFY----KVNLKKECPFWADDSR-CAMKYC 440 SI+T+ Y +FY K+ +K C F+ D + A KYC Sbjct: 779 SIITQKYCKFYLRDGKLAAQKYCKFYLRDGKLAAQKYC 816 >SB_12855| Best HMM Match : TPR_2 (HMM E-Value=2.3e-12) Length = 567 Score = 28.3 bits (60), Expect = 6.5 Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 2/75 (2%) Frame = +3 Query: 477 YETGYN-NEYVDET-PATKYSKEAQSDCKSDLDHDPQLSYLNMTISAANQYEIAKWKVHD 650 Y YN N+Y D Y + D D D+D Y + N Y + D Sbjct: 114 YHKDYNDNDYDDYNYDDNDYDNDDYDDYNYD-DNDYDDVYEDDDAYDDNDYN--NYYDDD 170 Query: 651 DAHDNFCESDDRDAD 695 D HD CE+DD D D Sbjct: 171 DYHDYVCENDDVDYD 185 >SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1524 Score = 27.9 bits (59), Expect = 8.5 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Frame = +3 Query: 456 TKESVPGYETGYNNEYVDETPATKYSKEAQS--DCKSDLDHDPQLSYLNMTISAANQYE 626 TK GY GYN+ E +++Y + + D D + SY + S+ + YE Sbjct: 1376 TKGRYNGYSNGYNDNQPKEKRSSEYQDDPRDNRDSYGDYSRSSRSSYEDHPRSSRSSYE 1434 >SB_17612| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 566 Score = 27.9 bits (59), Expect = 8.5 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = +3 Query: 285 CKVDTIDFFNNV-KIFPRIQSIVTKDYFRFYKVNLKKECPFWADDSRCAMKYCHI 446 CK T+ F NV K+F +++S + + + K + A S C +K C + Sbjct: 150 CKYRTVGFEENVTKLFGKLRSAIPRRICKTCKRKIDSGYTLHACASHCGLKTCPV 204 >SB_10009| Best HMM Match : CPL (HMM E-Value=2.5) Length = 321 Score = 27.9 bits (59), Expect = 8.5 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 9/51 (17%) Frame = -3 Query: 689 ITVITFTKIIMCIIVNFPFCYFILVG--------STNGHIQIAQLRI-VIQ 564 + VI+F K+I C I+ F FC + G S+ H++ AQL VIQ Sbjct: 48 LCVISFAKMIKCSIIYFVFCATLASGAALSEESKSSRRHVRSAQLNTNVIQ 98 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,111,529 Number of Sequences: 59808 Number of extensions: 454353 Number of successful extensions: 1479 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1314 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1468 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1865706635 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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