Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30848
         (751 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I3G3 Cluster: Putative uncharacterized protein PFE152...    33   7.5  
UniRef50_Q4X3J3 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  

>UniRef50_Q8I3G3 Cluster: Putative uncharacterized protein PFE1525w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFE1525w - Plasmodium falciparum
           (isolate 3D7)
          Length = 970

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
 Frame = -2

Query: 441 FWCMYRIYLYYHM----HVVKSG*YNITKRHSNFIYMYRF-FYFLLCFNMT 304
           F C+YR+Y Y H     +  K+   NI   ++++IY+Y F FY  L  N T
Sbjct: 539 FVCLYRMYYYNHKEQDNYSNKNNNNNIYNNNNSYIYVYMFGFYTFLYKNST 589


>UniRef50_Q4X3J3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 49

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
 Frame = -2

Query: 423 IYLYYHMHVVKSG*YNITKR-HSNFIYMYRFFYFLLCFN 310
           ++LYY+ H++ +  Y I K+ +S+F  +Y F YFLL +N
Sbjct: 1   MHLYYYTHIIIN--YWILKQAYSSFNLLYIFIYFLLLYN 37


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,802,003
Number of Sequences: 1657284
Number of extensions: 12471207
Number of successful extensions: 26108
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26092
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)