Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30848
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    24   1.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.5  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   2.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   6.0  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   6.0  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 432 YTKMTLTIFFCLFVCLFR 485
           Y +   T F C+ VC+FR
Sbjct: 153 YFQFYYTYFLCVIVCIFR 170


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -2

Query: 423 IYLYYHMHVVKSG*YNITKRHSNFIYMYRFFYFLL 319
           IY +Y+MH++    + I   H  F+    +FY  L
Sbjct: 258 IYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCAL 292


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/36 (33%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
 Frame = -3

Query: 290 SFHLIRNY*VSLLYIIIEHKGSLSLVK--IQTSPYI 189
           S+ +I ++  +L +III+  GS+ +VK  ++T+ Y+
Sbjct: 163 SYIIIVSFATNLYFIIIQLFGSMKIVKGTLKTAYYL 198


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 257  LLYIIIEHKGSLSLVKIQTS 198
            +LY +IEHK   S   IQ S
Sbjct: 1521 MLYFVIEHKKKTSTEWIQVS 1540


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +1

Query: 322 QKVKKSIHIN---KIGVSLCNIILSAFYYMHMII*VYTVHTPK*H*QFFSVCLSVCSG*P 492
           QK+  +  +     IGVSL +++  A+Y       +Y V T K    F +V + VC   P
Sbjct: 245 QKINSAFSVQLLVSIGVSLFDVLFQAYY-------LYYVATGK--ASFVTVPMIVC---P 292

Query: 493 LEWL 504
           + WL
Sbjct: 293 IVWL 296


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +1

Query: 322 QKVKKSIHIN---KIGVSLCNIILSAFYYMHMII*VYTVHTPK*H*QFFSVCLSVCSG*P 492
           QK+  +  +     IGVSL +++  A+Y       +Y V T K    F +V + VC   P
Sbjct: 245 QKINSAFSVQLLVSIGVSLFDVLFQAYY-------LYYVATGK--ASFVTVPMIVC---P 292

Query: 493 LEWL 504
           + WL
Sbjct: 293 IVWL 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,191
Number of Sequences: 336
Number of extensions: 3864
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)