Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30846
         (635 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0194 + 26287854-26288233,26289810-26290044                      244   4e-65
01_06_0526 - 30016524-30016973                                        134   7e-32
01_06_0525 - 30014497-30014731,30015509-30015573                      116   1e-26
03_04_0096 + 17270261-17270424,17270573-17270669                       94   1e-19
07_01_0122 - 926971-927378                                             78   7e-15
10_08_0392 + 17500748-17500877,17501006-17501280,17501321-175013...    29   3.1  
07_03_1492 + 26960876-26960986,26961910-26962074,26962153-269622...    28   7.1  

>05_06_0194 + 26287854-26288233,26289810-26290044
          Length = 204

 Score =  244 bits (598), Expect = 4e-65
 Identities = 110/146 (75%), Positives = 120/146 (82%)
 Frame = -3

Query: 633 RLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGT 454
           ++DDL+NW R+GS+WPMTFGLACCAVEMMH  A RYD DR+GV+FR SPRQSD MIVAGT
Sbjct: 57  KVDDLMNWARRGSIWPMTFGLACCAVEMMHTGASRYDFDRFGVIFRPSPRQSDCMIVAGT 116

Query: 453 LTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPVDIYVPGCPP 274
           LTNKMAPALRKVYDQMP+PRWVISMGSCAN             GCDRIVPVDIYVPGCPP
Sbjct: 117 LTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPP 176

Query: 273 TAEALLYGVLQLQKKIKRMKTIQVWY 196
           TAEALLYGVLQLQKKI R +    W+
Sbjct: 177 TAEALLYGVLQLQKKINRRRDFLHWW 202


>01_06_0526 - 30016524-30016973
          Length = 149

 Score =  134 bits (323), Expect = 7e-32
 Identities = 57/71 (80%), Positives = 64/71 (90%)
 Frame = -3

Query: 633 RLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGT 454
           ++DDL+NW R+GS+WPMTFGLACCAVEMMH  A RYD DR+GV+FR SPRQSD MIVAGT
Sbjct: 52  KVDDLMNWARRGSIWPMTFGLACCAVEMMHAGASRYDFDRFGVIFRPSPRQSDCMIVAGT 111

Query: 453 LTNKMAPALRK 421
           LTNKMAPALRK
Sbjct: 112 LTNKMAPALRK 122


>01_06_0525 - 30014497-30014731,30015509-30015573
          Length = 99

 Score =  116 bits (280), Expect = 1e-26
 Identities = 55/78 (70%), Positives = 58/78 (74%)
 Frame = -3

Query: 429 LRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPVDIYVPGCPPTAEALLYG 250
           L +VYDQMP+PRWVISMGSCAN             GCDRIVPVDIYVPGCPPTAEALLYG
Sbjct: 20  LVEVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYG 79

Query: 249 VLQLQKKIKRMKTIQVWY 196
           VLQLQKKI R K    W+
Sbjct: 80  VLQLQKKINRRKDFLHWW 97


>03_04_0096 + 17270261-17270424,17270573-17270669
          Length = 86

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 42/55 (76%), Positives = 45/55 (81%)
 Frame = -3

Query: 585 MTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRK 421
           MTFGLAC AVEMMH  A RYD DR+GV+F  SPRQSD MI+ GTLTNKM PALRK
Sbjct: 1   MTFGLACFAVEMMHAGASRYDFDRFGVIFHPSPRQSDCMIITGTLTNKMVPALRK 55


>07_01_0122 - 926971-927378
          Length = 135

 Score = 77.8 bits (183), Expect = 7e-15
 Identities = 36/51 (70%), Positives = 39/51 (76%)
 Frame = -3

Query: 573 LACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRK 421
           LA CAVEMMH  A  YD DR+ V+FR SPRQSD MI+ GTLTNKM PAL K
Sbjct: 58  LAYCAVEMMHAGASCYDFDRFRVIFRPSPRQSDCMIIVGTLTNKMGPALGK 108


>10_08_0392 +
           17500748-17500877,17501006-17501280,17501321-17501388,
           17501516-17501632,17501802-17501943,17502622-17502912,
           17503507-17503650
          Length = 388

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 14/53 (26%), Positives = 29/53 (54%)
 Frame = -3

Query: 597 SLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKM 439
           S+  +   L    + ++ IAA R  +    +++++SP QS V++V G   +K+
Sbjct: 176 SVTDLQLNLLGSIIAVLTIAATRLKVSSTQLLYQSSPYQSAVLLVTGPFVDKL 228


>07_03_1492 +
           26960876-26960986,26961910-26962074,26962153-26962271,
           26962559-26962633,26963063-26963156,26963239-26963298,
           26963474-26963539,26963622-26963720,26964027-26964035
          Length = 265

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -2

Query: 607 EERFPLAHDLWSSLLRCR-DDAYCC 536
           E R  LAH  WS LLR + D+AYCC
Sbjct: 92  EGRKDLAH-CWSILLRQKVDEAYCC 115


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,131,350
Number of Sequences: 37544
Number of extensions: 340406
Number of successful extensions: 739
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)