Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30846
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79758-2|CAB02132.1|  199|Caenorhabditis elegans Hypothetical pr...   248   3e-66
AC006662-3|AAF39895.1|  368|Caenorhabditis elegans Hypothetical ...    29   2.8  

>Z79758-2|CAB02132.1|  199|Caenorhabditis elegans Hypothetical
           protein W10D5.2 protein.
          Length = 199

 Score =  248 bits (607), Expect = 3e-66
 Identities = 109/147 (74%), Positives = 126/147 (85%)
 Frame = -3

Query: 633 RLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGT 454
           RLDD+LN  ++GS+WP+TFGLACCAVEMMH AAPRYDMDRYGVVFRASPRQ+D++ VAGT
Sbjct: 52  RLDDVLNLAQRGSIWPLTFGLACCAVEMMHFAAPRYDMDRYGVVFRASPRQADLIFVAGT 111

Query: 453 LTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPVDIYVPGCPP 274
           +TNKMAPALR++YDQMP+ +WVISMGSCAN             GCDR++PVDIYVPGCPP
Sbjct: 112 VTNKMAPALRRIYDQMPEAKWVISMGSCANGGGYYHYAYSVLRGCDRVIPVDIYVPGCPP 171

Query: 273 TAEALLYGVLQLQKKIKRMKTIQVWYR 193
           TAEALLYGVLQLQKKIKR +  Q+WYR
Sbjct: 172 TAEALLYGVLQLQKKIKRKREAQLWYR 198


>AC006662-3|AAF39895.1|  368|Caenorhabditis elegans Hypothetical
           protein H23L24.4 protein.
          Length = 368

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = -2

Query: 220 NENYSSVV*ELIDPIIVYVNKIMLITYMLLVNFSLIIN 107
           NENY  V+  L+ P++VY+  ++L++   ++NF ++ N
Sbjct: 199 NENYHRVLDNLLYPLLVYLVPLLLLS---VLNFRILSN 233


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,012,769
Number of Sequences: 27780
Number of extensions: 307860
Number of successful extensions: 668
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)