BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30846 (635 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z79758-2|CAB02132.1| 199|Caenorhabditis elegans Hypothetical pr... 248 3e-66 AC006662-3|AAF39895.1| 368|Caenorhabditis elegans Hypothetical ... 29 2.8 >Z79758-2|CAB02132.1| 199|Caenorhabditis elegans Hypothetical protein W10D5.2 protein. Length = 199 Score = 248 bits (607), Expect = 3e-66 Identities = 109/147 (74%), Positives = 126/147 (85%) Frame = -3 Query: 633 RLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGT 454 RLDD+LN ++GS+WP+TFGLACCAVEMMH AAPRYDMDRYGVVFRASPRQ+D++ VAGT Sbjct: 52 RLDDVLNLAQRGSIWPLTFGLACCAVEMMHFAAPRYDMDRYGVVFRASPRQADLIFVAGT 111 Query: 453 LTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPVDIYVPGCPP 274 +TNKMAPALR++YDQMP+ +WVISMGSCAN GCDR++PVDIYVPGCPP Sbjct: 112 VTNKMAPALRRIYDQMPEAKWVISMGSCANGGGYYHYAYSVLRGCDRVIPVDIYVPGCPP 171 Query: 273 TAEALLYGVLQLQKKIKRMKTIQVWYR 193 TAEALLYGVLQLQKKIKR + Q+WYR Sbjct: 172 TAEALLYGVLQLQKKIKRKREAQLWYR 198 >AC006662-3|AAF39895.1| 368|Caenorhabditis elegans Hypothetical protein H23L24.4 protein. Length = 368 Score = 29.1 bits (62), Expect = 2.8 Identities = 13/38 (34%), Positives = 26/38 (68%) Frame = -2 Query: 220 NENYSSVV*ELIDPIIVYVNKIMLITYMLLVNFSLIIN 107 NENY V+ L+ P++VY+ ++L++ ++NF ++ N Sbjct: 199 NENYHRVLDNLLYPLLVYLVPLLLLS---VLNFRILSN 233 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,012,769 Number of Sequences: 27780 Number of extensions: 307860 Number of successful extensions: 668 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 649 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 668 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1406256614 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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