Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30845
         (733 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F1F552 Cluster: PREDICTED: hypothetical protein;...    33   7.2  
UniRef50_Q4P8D5 Cluster: Putative uncharacterized protein; n=1; ...    27   9.9  

>UniRef50_UPI0000F1F552 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 320

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 22/62 (35%), Positives = 29/62 (46%)
 Frame = +2

Query: 455 RSNRLLLFKKRVALFLDPFAN*CKKQLRI*NLNVQCQMSNSLVRMSNTNTDTHNHTQVTI 634
           +S R L F  R  + L+PF    +  L + N   Q Q S     MS ++T TH HT   I
Sbjct: 22  QSERRLTFLVRGGVVLEPFR--LEHNLAVSNHVFQLQPSVYQTLMSRSDTHTHTHTHTHI 79

Query: 635 KH 640
            H
Sbjct: 80  TH 81


>UniRef50_Q4P8D5 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 934

 Score = 26.6 bits (56), Expect(2) = 9.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 629 SPVCGCVCLCSC 594
           SP C C C CSC
Sbjct: 779 SPACSCSCSCSC 790



 Score = 24.6 bits (51), Expect(2) = 9.9
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -3

Query: 620 CGCVCLCSCLTFVQVNLTFDIG 555
           C C C CSC +     L  D G
Sbjct: 784 CSCSCSCSCSSTAMDELASDSG 805


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,958,805
Number of Sequences: 1657284
Number of extensions: 11587564
Number of successful extensions: 27649
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27150
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)