Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30845
         (733 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0270 - 2225250-2225263,2225549-2225732,2225817-2225972,222...    36   0.025
12_02_0538 + 20134594-20136042                                         29   5.0  

>01_01_0270 -
           2225250-2225263,2225549-2225732,2225817-2225972,
           2226276-2226374,2226489-2226563,2226682-2226750,
           2226917-2227115,2227492-2227597,2228118-2228526
          Length = 436

 Score = 36.3 bits (80), Expect = 0.025
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 221 LPPASRIHFDNIMFNPYSGVVKYELYTIRKYLREFTERIILSSP 352
           LPP S+I FD ++      V K +L    K+ +EF+E  I  SP
Sbjct: 374 LPPISKIDFDEVLVRQRPTVSKKDLVVYEKFTQEFSEEEIFISP 417


>12_02_0538 + 20134594-20136042
          Length = 482

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 252 ILCLTLILGLSNTNCILYGNTCENLQ 329
           ILCL  +LGL++++ I     C NL+
Sbjct: 267 ILCLHFVLGLTDSDMITLSQNCSNLK 292


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,565,163
Number of Sequences: 37544
Number of extensions: 285073
Number of successful extensions: 595
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)