BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30845 (733 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U53332-2|AAK31532.1| 473|Caenorhabditis elegans Tetraspanin fam... 31 1.1 Z68222-9|CAE46689.1| 631|Caenorhabditis elegans Hypothetical pr... 29 3.4 Z68222-8|CAC70146.2| 613|Caenorhabditis elegans Hypothetical pr... 29 3.4 Z68217-11|CAE46673.1| 631|Caenorhabditis elegans Hypothetical p... 29 3.4 Z68217-10|CAC70099.2| 613|Caenorhabditis elegans Hypothetical p... 29 3.4 U64845-5|AAC48027.1| 581|Caenorhabditis elegans Hypothetical pr... 29 3.4 Z70309-5|CAB54290.2| 402|Caenorhabditis elegans Hypothetical pr... 29 4.5 Z70309-4|CAA94359.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.5 Z83233-11|CAB05757.2| 292|Caenorhabditis elegans Hypothetical p... 28 5.9 >U53332-2|AAK31532.1| 473|Caenorhabditis elegans Tetraspanin family protein 18 protein. Length = 473 Score = 30.7 bits (66), Expect = 1.1 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 4/63 (6%) Frame = -2 Query: 699 FFSFTMFVNVMN*DAVYFAECLIVTCVWLC---VSVFVFDIRTS-EFDI*HWTFKFHILS 532 F++ +F + + D+VY IV+ + LC + +FVFD+ TS E + H K + +S Sbjct: 45 FYNIGIFQWLRDQDSVYLYSNFIVSFLVLCSVCLLIFVFDVATSQESEAFHVNLKTYSIS 104 Query: 531 CFL 523 +L Sbjct: 105 IYL 107 >Z68222-9|CAE46689.1| 631|Caenorhabditis elegans Hypothetical protein F58G6.5c protein. Length = 631 Score = 29.1 bits (62), Expect = 3.4 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +1 Query: 490 CLIPRSFCQLMQKTTQDMKFKRPMSNVKFTCTNVK 594 C++PRS + + T+DM PM NV+ T +K Sbjct: 117 CIVPRSV-EFINPKTEDMSMDIPMGNVQSEFTGLK 150 >Z68222-8|CAC70146.2| 613|Caenorhabditis elegans Hypothetical protein F58G6.5b protein. Length = 613 Score = 29.1 bits (62), Expect = 3.4 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +1 Query: 490 CLIPRSFCQLMQKTTQDMKFKRPMSNVKFTCTNVK 594 C++PRS + + T+DM PM NV+ T +K Sbjct: 99 CIVPRSV-EFINPKTEDMSMDIPMGNVQSEFTGLK 132 >Z68217-11|CAE46673.1| 631|Caenorhabditis elegans Hypothetical protein F58G6.5c protein. Length = 631 Score = 29.1 bits (62), Expect = 3.4 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +1 Query: 490 CLIPRSFCQLMQKTTQDMKFKRPMSNVKFTCTNVK 594 C++PRS + + T+DM PM NV+ T +K Sbjct: 117 CIVPRSV-EFINPKTEDMSMDIPMGNVQSEFTGLK 150 >Z68217-10|CAC70099.2| 613|Caenorhabditis elegans Hypothetical protein F58G6.5b protein. Length = 613 Score = 29.1 bits (62), Expect = 3.4 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +1 Query: 490 CLIPRSFCQLMQKTTQDMKFKRPMSNVKFTCTNVK 594 C++PRS + + T+DM PM NV+ T +K Sbjct: 99 CIVPRSV-EFINPKTEDMSMDIPMGNVQSEFTGLK 132 >U64845-5|AAC48027.1| 581|Caenorhabditis elegans Hypothetical protein F45F2.6 protein. Length = 581 Score = 29.1 bits (62), Expect = 3.4 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +1 Query: 268 LFWGCQIRIVYYTEIPARIY-RKNNLV*SLTYIQPH 372 + WGC+I + ++TE IY K L TY+Q H Sbjct: 160 VLWGCEIFLCFFTETRHNIYVVKYILAFLFTYLQMH 195 >Z70309-5|CAB54290.2| 402|Caenorhabditis elegans Hypothetical protein R102.5b protein. Length = 402 Score = 28.7 bits (61), Expect = 4.5 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = +2 Query: 185 DRNRQVRGSQYALPPASRIHFDNIMFNPYSGVVKYELYTIRKYLREFTERI 337 D+ + RG PPAS + YS +++EL T+RK L E E + Sbjct: 285 DQLKHARGGSVFDPPASFVASQLAERTTYSLNLEHELITLRKELEETKEAL 335 >Z70309-4|CAA94359.2| 388|Caenorhabditis elegans Hypothetical protein R102.5a protein. Length = 388 Score = 28.7 bits (61), Expect = 4.5 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = +2 Query: 185 DRNRQVRGSQYALPPASRIHFDNIMFNPYSGVVKYELYTIRKYLREFTERI 337 D+ + RG PPAS + YS +++EL T+RK L E E + Sbjct: 285 DQLKHARGGSVFDPPASFVASQLAERTTYSLNLEHELITLRKELEETKEAL 335 >Z83233-11|CAB05757.2| 292|Caenorhabditis elegans Hypothetical protein K06B4.9 protein. Length = 292 Score = 28.3 bits (60), Expect = 5.9 Identities = 15/56 (26%), Positives = 24/56 (42%) Frame = -2 Query: 711 FYSLFFSFTMFVNVMN*DAVYFAECLIVTCVWLCVSVFVFDIRTSEFDI*HWTFKF 544 F LFF N + V L +TC+ C + F +++ HW+F+F Sbjct: 102 FCVLFFQHRYEQLFSNPNTVIMRNYLWITCIIFCAVCYEFSKCFLKYNPNHWSFEF 157 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,744,803 Number of Sequences: 27780 Number of extensions: 300623 Number of successful extensions: 731 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 715 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 731 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1714401074 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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