Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30845
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53332-2|AAK31532.1|  473|Caenorhabditis elegans Tetraspanin fam...    31   1.1  
Z68222-9|CAE46689.1|  631|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z68222-8|CAC70146.2|  613|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z68217-11|CAE46673.1|  631|Caenorhabditis elegans Hypothetical p...    29   3.4  
Z68217-10|CAC70099.2|  613|Caenorhabditis elegans Hypothetical p...    29   3.4  
U64845-5|AAC48027.1|  581|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z70309-5|CAB54290.2|  402|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z70309-4|CAA94359.2|  388|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z83233-11|CAB05757.2|  292|Caenorhabditis elegans Hypothetical p...    28   5.9  

>U53332-2|AAK31532.1|  473|Caenorhabditis elegans Tetraspanin family
           protein 18 protein.
          Length = 473

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
 Frame = -2

Query: 699 FFSFTMFVNVMN*DAVYFAECLIVTCVWLC---VSVFVFDIRTS-EFDI*HWTFKFHILS 532
           F++  +F  + + D+VY     IV+ + LC   + +FVFD+ TS E +  H   K + +S
Sbjct: 45  FYNIGIFQWLRDQDSVYLYSNFIVSFLVLCSVCLLIFVFDVATSQESEAFHVNLKTYSIS 104

Query: 531 CFL 523
            +L
Sbjct: 105 IYL 107


>Z68222-9|CAE46689.1|  631|Caenorhabditis elegans Hypothetical
           protein F58G6.5c protein.
          Length = 631

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 490 CLIPRSFCQLMQKTTQDMKFKRPMSNVKFTCTNVK 594
           C++PRS  + +   T+DM    PM NV+   T +K
Sbjct: 117 CIVPRSV-EFINPKTEDMSMDIPMGNVQSEFTGLK 150


>Z68222-8|CAC70146.2|  613|Caenorhabditis elegans Hypothetical
           protein F58G6.5b protein.
          Length = 613

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 490 CLIPRSFCQLMQKTTQDMKFKRPMSNVKFTCTNVK 594
           C++PRS  + +   T+DM    PM NV+   T +K
Sbjct: 99  CIVPRSV-EFINPKTEDMSMDIPMGNVQSEFTGLK 132


>Z68217-11|CAE46673.1|  631|Caenorhabditis elegans Hypothetical
           protein F58G6.5c protein.
          Length = 631

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 490 CLIPRSFCQLMQKTTQDMKFKRPMSNVKFTCTNVK 594
           C++PRS  + +   T+DM    PM NV+   T +K
Sbjct: 117 CIVPRSV-EFINPKTEDMSMDIPMGNVQSEFTGLK 150


>Z68217-10|CAC70099.2|  613|Caenorhabditis elegans Hypothetical
           protein F58G6.5b protein.
          Length = 613

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 490 CLIPRSFCQLMQKTTQDMKFKRPMSNVKFTCTNVK 594
           C++PRS  + +   T+DM    PM NV+   T +K
Sbjct: 99  CIVPRSV-EFINPKTEDMSMDIPMGNVQSEFTGLK 132


>U64845-5|AAC48027.1|  581|Caenorhabditis elegans Hypothetical
           protein F45F2.6 protein.
          Length = 581

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +1

Query: 268 LFWGCQIRIVYYTEIPARIY-RKNNLV*SLTYIQPH 372
           + WGC+I + ++TE    IY  K  L    TY+Q H
Sbjct: 160 VLWGCEIFLCFFTETRHNIYVVKYILAFLFTYLQMH 195


>Z70309-5|CAB54290.2|  402|Caenorhabditis elegans Hypothetical
           protein R102.5b protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +2

Query: 185 DRNRQVRGSQYALPPASRIHFDNIMFNPYSGVVKYELYTIRKYLREFTERI 337
           D+ +  RG     PPAS +         YS  +++EL T+RK L E  E +
Sbjct: 285 DQLKHARGGSVFDPPASFVASQLAERTTYSLNLEHELITLRKELEETKEAL 335


>Z70309-4|CAA94359.2|  388|Caenorhabditis elegans Hypothetical
           protein R102.5a protein.
          Length = 388

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +2

Query: 185 DRNRQVRGSQYALPPASRIHFDNIMFNPYSGVVKYELYTIRKYLREFTERI 337
           D+ +  RG     PPAS +         YS  +++EL T+RK L E  E +
Sbjct: 285 DQLKHARGGSVFDPPASFVASQLAERTTYSLNLEHELITLRKELEETKEAL 335


>Z83233-11|CAB05757.2|  292|Caenorhabditis elegans Hypothetical
           protein K06B4.9 protein.
          Length = 292

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = -2

Query: 711 FYSLFFSFTMFVNVMN*DAVYFAECLIVTCVWLCVSVFVFDIRTSEFDI*HWTFKF 544
           F  LFF         N + V     L +TC+  C   + F     +++  HW+F+F
Sbjct: 102 FCVLFFQHRYEQLFSNPNTVIMRNYLWITCIIFCAVCYEFSKCFLKYNPNHWSFEF 157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,744,803
Number of Sequences: 27780
Number of extensions: 300623
Number of successful extensions: 731
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)