Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30844
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    25   0.85 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.5  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.5  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   6.0  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -3

Query: 92  IFKFQKKRNNRDSTTN 45
           +FK +KKR NR+STTN
Sbjct: 327 LFK-KKKRRNRESTTN 341


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -1

Query: 124 LNLHYTICNLKYSSSKKRGIIEIRLQISK 38
           LNL +   NLK++ S+  G+ ++R+  +K
Sbjct: 56  LNLEWNDYNLKWNESEYGGVKDLRITPNK 84


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -1

Query: 124 LNLHYTICNLKYSSSKKRGIIEIRLQISK 38
           LNL +   NLK++ S+  G+ ++R+  +K
Sbjct: 56  LNLEWNDYNLKWNESEYGGVKDLRITPNK 84


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -1

Query: 124 LNLHYTICNLKYSSSKKRGIIEIRLQISK 38
           LNL +   NLK++ S+  G+ ++R+  +K
Sbjct: 56  LNLEWNDYNLKWNESEYGGVKDLRITPNK 84


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 395 FSETSVQQFIFIYRYR*IDRLWPDPQVSV 481
           F ETS+   ++       +R+W DPQ+ V
Sbjct: 559 FDETSLDTRLWPRAAAFAERVWSDPQLDV 587


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +2

Query: 269 KQNCYYYLIPSIFIFIYLLNLHWTSTNNSRLKLAKSVQPFSSFSETSVQQFIFIYRY 439
           +Q    ++IP   I I+L++L W     SR      ++      E   Q   FIY +
Sbjct: 248 EQRADLWIIP---IAIFLVSLGWWENYISRHSPIPFIKKLGKIKENLEQSRYFIYMF 301


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +2

Query: 269 KQNCYYYLIPSIFIFIYLLNLHWTSTNNSRLKLAKSVQPFSSFSETSVQQFIFIYRY 439
           +Q    ++IP   I I+L++L W     SR      ++      E   Q   FIY +
Sbjct: 248 EQRADLWIIP---IAIFLVSLGWWENYISRHSPIPFIKKLGKIKENLEQSRYFIYMF 301


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +2

Query: 269 KQNCYYYLIPSIFIFIYLLNLHWTSTNNSRLKLAKSVQPFSSFSETSVQQFIFIYRY 439
           +Q    ++IP   I I+L++L W     SR      ++      E   Q   FIY +
Sbjct: 248 EQRADLWIIP---IAIFLVSLGWWENYISRHSPIPFIKKLGKIKENLEQSRYFIYMF 301


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +2

Query: 269 KQNCYYYLIPSIFIFIYLLNLHWTSTNNSRLKLAKSVQPFSSFSETSVQQFIFIYRY 439
           +Q    ++IP   I I+L++L W     SR      ++      E   Q   FIY +
Sbjct: 248 EQRADLWIIP---IAIFLVSLGWWENYISRHSPIPFIKKLGKIKENLEQSRYFIYMF 301


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 720 VWGIKSEVEWNLS 682
           VWG+K + E+ LS
Sbjct: 253 VWGVKDQAEFTLS 265


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/39 (20%), Positives = 22/39 (56%)
 Frame = +1

Query: 586 TYITAIIQQNYLRYCKWIAI*ML*ISVLMLYEAQIPLHL 702
           +Y+    ++ Y ++C+ +   ++ I VL +  + + LH+
Sbjct: 24  SYLKIYHKEKYRKFCRILKYFIIAIYVLTILTSSVTLHV 62


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = -1

Query: 187 YRLRHYEVCRVK*S*NKNDPVLNLHYTICNLKYSSSKKRGIIEI 56
           YR R  E+  +  +    DP+  + YT    K   S    ++E+
Sbjct: 229 YRARRKEIAEIAFAYKYGDPIPYIQYTETETKTWGSVFNTVLEL 272


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,000
Number of Sequences: 336
Number of extensions: 3697
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)