BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30844 (742 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 25 0.85 EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.5 EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.5 EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.5 EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 23 2.6 AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 3.4 AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 3.4 AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 3.4 AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 3.4 DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 4.5 AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 22 4.5 EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 22 6.0 >EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive peptide receptor 1 protein. Length = 374 Score = 24.6 bits (51), Expect = 0.85 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = -3 Query: 92 IFKFQKKRNNRDSTTN 45 +FK +KKR NR+STTN Sbjct: 327 LFK-KKKRRNRESTTN 341 >EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 3 protein. Length = 311 Score = 23.8 bits (49), Expect = 1.5 Identities = 10/29 (34%), Positives = 19/29 (65%) Frame = -1 Query: 124 LNLHYTICNLKYSSSKKRGIIEIRLQISK 38 LNL + NLK++ S+ G+ ++R+ +K Sbjct: 56 LNLEWNDYNLKWNESEYGGVKDLRITPNK 84 >EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 2 protein. Length = 311 Score = 23.8 bits (49), Expect = 1.5 Identities = 10/29 (34%), Positives = 19/29 (65%) Frame = -1 Query: 124 LNLHYTICNLKYSSSKKRGIIEIRLQISK 38 LNL + NLK++ S+ G+ ++R+ +K Sbjct: 56 LNLEWNDYNLKWNESEYGGVKDLRITPNK 84 >EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 1 protein. Length = 311 Score = 23.8 bits (49), Expect = 1.5 Identities = 10/29 (34%), Positives = 19/29 (65%) Frame = -1 Query: 124 LNLHYTICNLKYSSSKKRGIIEIRLQISK 38 LNL + NLK++ S+ G+ ++R+ +K Sbjct: 56 LNLEWNDYNLKWNESEYGGVKDLRITPNK 84 >EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglucosaminidase FDL protein. Length = 630 Score = 23.0 bits (47), Expect = 2.6 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = +2 Query: 395 FSETSVQQFIFIYRYR*IDRLWPDPQVSV 481 F ETS+ ++ +R+W DPQ+ V Sbjct: 559 FDETSLDTRLWPRAAAFAERVWSDPQLDV 587 >AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase variant 2 protein. Length = 1558 Score = 22.6 bits (46), Expect = 3.4 Identities = 15/57 (26%), Positives = 24/57 (42%) Frame = +2 Query: 269 KQNCYYYLIPSIFIFIYLLNLHWTSTNNSRLKLAKSVQPFSSFSETSVQQFIFIYRY 439 +Q ++IP I I+L++L W SR ++ E Q FIY + Sbjct: 248 EQRADLWIIP---IAIFLVSLGWWENYISRHSPIPFIKKLGKIKENLEQSRYFIYMF 301 >AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase variant 1 protein. Length = 1558 Score = 22.6 bits (46), Expect = 3.4 Identities = 15/57 (26%), Positives = 24/57 (42%) Frame = +2 Query: 269 KQNCYYYLIPSIFIFIYLLNLHWTSTNNSRLKLAKSVQPFSSFSETSVQQFIFIYRY 439 +Q ++IP I I+L++L W SR ++ E Q FIY + Sbjct: 248 EQRADLWIIP---IAIFLVSLGWWENYISRHSPIPFIKKLGKIKENLEQSRYFIYMF 301 >AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B protein. Length = 1558 Score = 22.6 bits (46), Expect = 3.4 Identities = 15/57 (26%), Positives = 24/57 (42%) Frame = +2 Query: 269 KQNCYYYLIPSIFIFIYLLNLHWTSTNNSRLKLAKSVQPFSSFSETSVQQFIFIYRY 439 +Q ++IP I I+L++L W SR ++ E Q FIY + Sbjct: 248 EQRADLWIIP---IAIFLVSLGWWENYISRHSPIPFIKKLGKIKENLEQSRYFIYMF 301 >AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A protein. Length = 1558 Score = 22.6 bits (46), Expect = 3.4 Identities = 15/57 (26%), Positives = 24/57 (42%) Frame = +2 Query: 269 KQNCYYYLIPSIFIFIYLLNLHWTSTNNSRLKLAKSVQPFSSFSETSVQQFIFIYRY 439 +Q ++IP I I+L++L W SR ++ E Q FIY + Sbjct: 248 EQRADLWIIP---IAIFLVSLGWWENYISRHSPIPFIKKLGKIKENLEQSRYFIYMF 301 >DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation protein. Length = 947 Score = 22.2 bits (45), Expect = 4.5 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = -2 Query: 720 VWGIKSEVEWNLS 682 VWG+K + E+ LS Sbjct: 253 VWGVKDQAEFTLS 265 >AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical protein protein. Length = 205 Score = 22.2 bits (45), Expect = 4.5 Identities = 8/39 (20%), Positives = 22/39 (56%) Frame = +1 Query: 586 TYITAIIQQNYLRYCKWIAI*ML*ISVLMLYEAQIPLHL 702 +Y+ ++ Y ++C+ + ++ I VL + + + LH+ Sbjct: 24 SYLKIYHKEKYRKFCRILKYFIIAIYVLTILTSSVTLHV 62 >EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxylase protein. Length = 532 Score = 21.8 bits (44), Expect = 6.0 Identities = 11/44 (25%), Positives = 19/44 (43%) Frame = -1 Query: 187 YRLRHYEVCRVK*S*NKNDPVLNLHYTICNLKYSSSKKRGIIEI 56 YR R E+ + + DP+ + YT K S ++E+ Sbjct: 229 YRARRKEIAEIAFAYKYGDPIPYIQYTETETKTWGSVFNTVLEL 272 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 173,000 Number of Sequences: 336 Number of extensions: 3697 Number of successful extensions: 14 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 14 length of database: 122,585 effective HSP length: 55 effective length of database: 104,105 effective search space used: 19884055 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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