Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30844
         (742 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83216-5|CAB62782.1|  221|Caenorhabditis elegans Hypothetical pr...    32   0.37 
Z82278-9|CAE17877.1|  323|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z82070-8|CAE17980.1|  323|Caenorhabditis elegans Hypothetical pr...    28   6.0  

>Z83216-5|CAB62782.1|  221|Caenorhabditis elegans Hypothetical
           protein C08F11.7 protein.
          Length = 221

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +2

Query: 362 KLAKSVQPFSSFSETSVQQFIFIYRYR*IDRLWPDPQVSVHLVY*TYRRVGTFRSEAL 535
           +L+K+V+  + FS+    Q IF  R R     W   + S HL    + R+  F+S+ L
Sbjct: 94  QLSKTVEETTDFSDQEKVQMIFGARIRMNQSFWERFKPSAHLTLDKFSRLAFFKSDTL 151


>Z82278-9|CAE17877.1|  323|Caenorhabditis elegans Hypothetical
           protein W04E12.9 protein.
          Length = 323

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -2

Query: 465 SGHSLSIYLYLYIKMNCCTLVS 400
           S H+L IYL+L+++ N  T++S
Sbjct: 19  SSHNLYIYLHLFVQSNTTTIIS 40


>Z82070-8|CAE17980.1|  323|Caenorhabditis elegans Hypothetical
           protein W04E12.9 protein.
          Length = 323

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -2

Query: 465 SGHSLSIYLYLYIKMNCCTLVS 400
           S H+L IYL+L+++ N  T++S
Sbjct: 19  SSHNLYIYLHLFVQSNTTTIIS 40


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,590,659
Number of Sequences: 27780
Number of extensions: 335403
Number of successful extensions: 677
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)