Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30843
(677 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g15860.2 68418.m01856 expressed protein 45 4e-05
At5g15860.1 68418.m01855 expressed protein 45 4e-05
At3g02410.1 68416.m00228 hypothetical protein weak similarity to... 44 7e-05
At5g23530.1 68418.m02761 expressed protein contains similarity t... 39 0.003
At1g26120.1 68414.m03188 esterase-related contains similaity to ... 38 0.006
At3g27320.1 68416.m03414 expressed protein low similarity to PrM... 38 0.008
At1g49660.1 68414.m05569 expressed protein 38 0.008
At1g68620.1 68414.m07841 expressed protein similar to PrMC3 [Pin... 37 0.014
At5g14310.1 68418.m01673 expressed protein low similarity to PrM... 36 0.025
At5g27320.1 68418.m03262 expressed protein similar to PrMC3 [Pin... 36 0.033
At5g16080.1 68418.m01879 expressed protein similar to PrMC3 [Pin... 36 0.033
At3g63010.1 68416.m07078 expressed protein similar to PrMC3 [Pin... 36 0.033
At3g05120.1 68416.m00556 expressed protein low similarity to PrM... 35 0.043
At5g06570.2 68418.m00742 expressed protein similar to PrMC3 [Pin... 33 0.13
At5g06570.1 68418.m00741 expressed protein similar to PrMC3 [Pin... 33 0.13
At2g45600.1 68415.m05670 expressed protein low similarity to PrM... 33 0.23
At1g47480.1 68414.m05267 expressed protein similar to PrMC3 [Pin... 33 0.23
At1g49650.1 68414.m05568 cell death associated protein-related s... 31 0.53
At2g03550.1 68415.m00315 expressed protein similar to PrMC3 [Pin... 31 0.70
At5g13100.1 68418.m01501 expressed protein 30 1.2
At1g50300.1 68414.m05639 zinc finger (Ran-binding) family protei... 30 1.2
At4g21430.1 68417.m03097 transcription factor jumonji (jmjC) dom... 30 1.6
At3g48690.1 68416.m05317 expressed protein similar to PrMC3 [Pin... 30 1.6
At3g59030.1 68416.m06579 transparent testa 12 protein (TT12) / m... 29 2.1
At5g62180.1 68418.m07805 expressed protein similar to PrMC3, Pin... 29 2.8
At1g19190.1 68414.m02389 expressed protein contains similarity t... 29 3.7
At3g52250.1 68416.m05742 myb family transcription factor contain... 28 4.9
At3g59610.1 68416.m06651 F-box family protein / jacalin lectin f... 28 6.5
At1g12350.1 68414.m01427 DNA/panthothenate metabolism flavoprote... 28 6.5
At1g12050.1 68414.m01391 fumarylacetoacetase, putative similar t... 28 6.5
At5g03280.1 68418.m00277 ethylene-insensitive 2 (EIN2) identical... 27 8.6
At3g48700.1 68416.m05318 expressed protein similar to PrMC3 [Pin... 27 8.6
At3g07390.1 68416.m00881 auxin-responsive protein / auxin-induce... 27 8.6
At2g38080.1 68415.m04674 laccase, putative / diphenol oxidase, p... 27 8.6
>At5g15860.2 68418.m01856 expressed protein
Length = 299
Score = 45.2 bits (102), Expect = 4e-05
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Frame = +2
Query: 356 GDENCLFLNVYTPSTDGAFLPVMIWIHGG----GFK-WGSGNTNLYGPDFLVDRDVVVMT 520
GD+ L++Y PS + PV++++ GG G+K WGS L G L +RD++V
Sbjct: 136 GDQPRNRLDLYLPSNNDGLKPVVVFVTGGAWIIGYKAWGS----LLGMQ-LAERDIIVAC 190
Query: 521 INYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNIHHFGGNAGNLTIFG 676
++YR N P+ + + D Q I +V +NI FGG+ + + G
Sbjct: 191 LDYR---------NFPQGTISDMVTDASQGISFVCNNISAFGGDPNRIYLMG 233
>At5g15860.1 68418.m01855 expressed protein
Length = 427
Score = 45.2 bits (102), Expect = 4e-05
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Frame = +2
Query: 356 GDENCLFLNVYTPSTDGAFLPVMIWIHGG----GFK-WGSGNTNLYGPDFLVDRDVVVMT 520
GD+ L++Y PS + PV++++ GG G+K WGS L G L +RD++V
Sbjct: 136 GDQPRNRLDLYLPSNNDGLKPVVVFVTGGAWIIGYKAWGS----LLGMQ-LAERDIIVAC 190
Query: 521 INYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNIHHFGGNAGNLTIFG 676
++YR N P+ + + D Q I +V +NI FGG+ + + G
Sbjct: 191 LDYR---------NFPQGTISDMVTDASQGISFVCNNISAFGGDPNRIYLMG 233
>At3g02410.1 68416.m00228 hypothetical protein weak similarity to
kynurenine formamidase [Mus musculus] GI:21552719
Length = 422
Score = 44.4 bits (100), Expect = 7e-05
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = +2
Query: 377 LNVYTPSTDGAFLPVMIWIHGG----GFK-WGSGNTNLYGPDFLVDRDVVVMTINYRCGA 541
L++Y P T PV++++ GG G+K WGS L G L +RD++V ++YR
Sbjct: 138 LDLYIPPTSDGLKPVVVFVTGGAWIIGYKAWGS----LLGLQ-LAERDIIVACLDYR--- 189
Query: 542 LGFLSLNTPEVPGNAGIKDIVQAIRWVKDNIHHFGGNAGNLTIFG 676
N P+ + + D Q I +V +NI FGG+ + + G
Sbjct: 190 ------NFPQGTISDMVSDAAQGISFVCNNISAFGGDPNRIYLMG 228
>At5g23530.1 68418.m02761 expressed protein contains similarity to
PrMC3 [Pinus radiata] GI:5487873
Length = 335
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +2
Query: 326 IDPVFAKSYVGDENC-LFLNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYG---PDFL 493
++ V +V D++ L+ +YTP G +PV+++ HGGGF + S N Y F
Sbjct: 57 VNIVSTSDFVVDQSRDLWFRLYTPHVSGDKIPVVVFFHGGGFAFLSPNAYPYDNVCRRFA 116
Query: 494 VDRDVVVMTINYR 532
V+++NYR
Sbjct: 117 RKLPAYVISVNYR 129
>At1g26120.1 68414.m03188 esterase-related contains similaity to
esterase 6 GI:606998 from [Drosophila simulans] and
esterase GI:12584120 from [Sphingomonas elodea]
Length = 476
Score = 37.9 bits (84), Expect = 0.006
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Frame = +2
Query: 332 PVFAKSYV-GDENCLFLNVYTPSTDGAFLPVMIWIHGG----GFK-WGSGNTNLYGPDFL 493
P +S V GD+ L++Y P PV+ ++ GG G+K WGS L G L
Sbjct: 178 PYVRRSIVYGDQPRNRLDLYLPKNSTGPKPVVAFVTGGAWIIGYKAWGS----LLGQQ-L 232
Query: 494 VDRDVVVMTINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNIHHFGGNAGNLTIF 673
+RD++V I+YR N P+ + +KD I +V ++I +GG+ + +
Sbjct: 233 SERDIIVACIDYR---------NFPQGSISDMVKDASSGISFVCNHIAEYGGDPDRIYLM 283
Query: 674 G 676
G
Sbjct: 284 G 284
>At3g27320.1 68416.m03414 expressed protein low similarity to PrMC3
[Pinus radiata] GI:5487873
Length = 460
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Frame = +2
Query: 386 YTPSTDGAF---LPVMIWIHGGGFKWGSGNTNLYGPDFLVDR-----DVVVMTINYR 532
Y PS+ G LPVM+ HGGG W SG+ + DF R D++V+ + YR
Sbjct: 154 YAPSSSGGNSRKLPVMLQFHGGG--WVSGSNDSVANDFFCRRMAKHCDIIVLAVGYR 208
>At1g49660.1 68414.m05569 expressed protein
Length = 319
Score = 37.5 bits (83), Expect = 0.008
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Frame = +2
Query: 320 AQIDPVF---AKSYV-GDENCLFLNVYTPS-----TDGAFLPVMIWIHGGGFKWGSGNTN 472
A +DP + +K + EN L + ++ P T G LP++I+IHGG + S +
Sbjct: 32 ASLDPTYDVVSKDVIYSPENNLSVRLFLPHKSTKLTAGNKLPLLIYIHGGAWIIESPFSP 91
Query: 473 LYGPDFLVDRDVVVMTINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWV 622
LY ++L + VV + N C A+ PE P A +D+ AI+W+
Sbjct: 92 LY-HNYLTE---VVKSAN--CLAVSVQYRRAPEDPVPAAYEDVWSAIQWI 135
>At1g68620.1 68414.m07841 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 336
Score = 36.7 bits (81), Expect = 0.014
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +2
Query: 371 LFLNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDV----VVMTINYRCG 538
L++ + T + + LP++++ HGGGF GS + Y +FL +VM++NYR
Sbjct: 75 LYVPMTTTKSSVSKLPLIVYFHGGGFCVGSASWLCY-HEFLARLSARSRCLVMSVNYRL- 132
Query: 539 ALGFLSLNTPEVPGNAGIKDIVQAIRWV 622
PE P A +D V AI W+
Sbjct: 133 --------APENPLPAAYEDGVNAILWL 152
>At5g14310.1 68418.m01673 expressed protein low similarity to PrMC3
[Pinus radiata] GI:5487873
Length = 446
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Frame = +2
Query: 386 YTPST--DGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDR-----DVVVMTINYR 532
Y PS + LPVM+ HGGG W SG+++ DF R DV+V+ + YR
Sbjct: 140 YAPSAKRNSRKLPVMLQFHGGG--WVSGSSDSAANDFFCRRIAKVCDVIVLAVGYR 193
>At5g27320.1 68418.m03262 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 344
Score = 35.5 bits (78), Expect = 0.033
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +2
Query: 401 DGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDV-----VVMTINYR 532
DG +PV+++ HGG F S N+ +Y D L R V VV+++NYR
Sbjct: 100 DGEIVPVIVFFHGGSFAHSSANSAIY--DTLCRRLVGLCGAVVVSVNYR 146
>At5g16080.1 68418.m01879 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 344
Score = 35.5 bits (78), Expect = 0.033
Identities = 34/104 (32%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Frame = +2
Query: 365 NCLFLNVYTPSTDGAF----LPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDV----VVMT 520
N + VY P A LP++++ HGGGF GS + Y DFL V V+++
Sbjct: 72 NDTWTRVYIPDAAAASPSVTLPLLVYFHGGGFCVGSAAWSCY-HDFLTSLAVKARCVIVS 130
Query: 521 INYRCGALGFLSLNTPEVPGNAGIKDIVQAIRW-VKDNIHHFGG 649
+NYR PE A D V + W VK I GG
Sbjct: 131 VNYRL---------APEHRLPAAYDDGVNVVSWLVKQQISTGGG 165
>At3g63010.1 68416.m07078 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 358
Score = 35.5 bits (78), Expect = 0.033
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +2
Query: 377 LNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYGP---DFLVDRDVVVMTINYRCGALG 547
L + P + +PV+I+ HGG F S N+ +Y + VVV++++YR
Sbjct: 94 LELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYR----- 148
Query: 548 FLSLNTPEVPGNAGIKDIVQAIRWVKDNIHHFGGNAGNLTIF 673
+PE D A+ WVK + G N+ ++
Sbjct: 149 ----RSPEHRYPCAYDDGWNALNWVKSRVWLQSGKDSNVYVY 186
>At3g05120.1 68416.m00556 expressed protein low similarity to PrMC3
[Pinus radiata] GI:5487873
Length = 345
Score = 35.1 bits (77), Expect = 0.043
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +2
Query: 335 VFAKSYVGDENCLFLNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDV-- 508
V+ +Y E + DG +PV+++ HGG F S N+ +Y D L R V
Sbjct: 80 VYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIY--DTLCRRLVGL 137
Query: 509 ---VVMTINYR 532
VV+++NYR
Sbjct: 138 CKCVVVSVNYR 148
>At5g06570.2 68418.m00742 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 329
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 335 VFAKSYVGDENCLFLNVYTP--STDGAFLPVMIWIHGGGFKWGS 460
+F S N L L +Y P +++ LPV+++ HGGGF +GS
Sbjct: 48 LFKDSIYHKPNNLHLRLYKPISASNRTALPVVVFFHGGGFCFGS 91
>At5g06570.1 68418.m00741 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 329
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 335 VFAKSYVGDENCLFLNVYTP--STDGAFLPVMIWIHGGGFKWGS 460
+F S N L L +Y P +++ LPV+++ HGGGF +GS
Sbjct: 48 LFKDSIYHKPNNLHLRLYKPISASNRTALPVVVFFHGGGFCFGS 91
>At2g45600.1 68415.m05670 expressed protein low similarity to PrMC3
[Pinus radiata] GI:5487873
Length = 329
Score = 32.7 bits (71), Expect = 0.23
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +2
Query: 365 NCLFLNVYTPST--DGAFLPVMIWIHGGGFKWGSGNTNLYGPDF--LVDR-DVVVMTINY 529
N F+ ++ P + LP++++ HGGGF S + + + DR +++++ Y
Sbjct: 48 NNTFIRIFKPRNIPPESKLPILVYFHGGGFILYSAASAPFHESCTKMADRLQTIILSVEY 107
Query: 530 RCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKD 628
R PE A +D V+AI W++D
Sbjct: 108 RL---------APEHRLPAAYEDAVEAILWLRD 131
>At1g47480.1 68414.m05267 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 314
Score = 32.7 bits (71), Expect = 0.23
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Frame = +2
Query: 281 DGIRDATAEGNVCAQ-IDP---VFAKSYVGDENC-LFLNVYTPST--DGAFLPVMIWIHG 439
DG + A VC +DP VF+K + + L +Y P + G +P+M++ HG
Sbjct: 21 DGTVERLAGTEVCPPGLDPITGVFSKDIIIEPKTGLSARIYRPFSIQPGQKIPLMLYFHG 80
Query: 440 GGFKWGSGNTNLYGPDF--LVDR-DVVVMTINYR 532
G F S + Y +V++ +V+ +++NYR
Sbjct: 81 GAFLISSTSFPSYHTSLNKIVNQANVIAVSVNYR 114
>At1g49650.1 68414.m05568 cell death associated protein-related
similar to PrMC3 [Pinus radiata] GI:5487873; weak
similarity to cell death associated protein [Nicotiana
tabacum] GI:7417008, hsr203J [Nicotiana tabacum]
GI:22830761
Length = 374
Score = 31.5 bits (68), Expect = 0.53
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +2
Query: 404 GAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDVVVMTINYRCGALGFLSLNTPEVPGN 583
G LP++I+ HGG + S + +Y +FL + VV + N C A+ PE P
Sbjct: 125 GNKLPLLIYFHGGAWINESPFSPIYH-NFLTE---VVKSAN--CLAVSVQYRRAPEDPVP 178
Query: 584 AGIKDIVQAIRWV 622
A +D AI+W+
Sbjct: 179 AAYEDTWSAIQWI 191
>At2g03550.1 68415.m00315 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873; contains an
esterase/lipase/thioesterase active site serine domain
(prosite: PS50187)
Length = 312
Score = 31.1 bits (67), Expect = 0.70
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +2
Query: 362 ENCLFLNVYTPS-TDGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDVVVMTINYRCG 538
E L L +Y P LP++I+ HGGGF + + P + V N C
Sbjct: 50 EKNLSLRIYLPEKVTVKKLPILIYFHGGGFIIETA----FSPPYHTFLTSAVAAAN--CL 103
Query: 539 ALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNI 634
A+ PE P +D +++WV +I
Sbjct: 104 AISVNYRRAPEFPVPIPYEDSWDSLKWVLTHI 135
>At5g13100.1 68418.m01501 expressed protein
Length = 354
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 353 VGDENCLFLNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYGP 484
V +ENC+F + P ++ +PV +++ G G W G + Y P
Sbjct: 295 VEEENCVFFLPHKPRSEVLEVPVFLFMKGTG--WCGGGADHYEP 336
>At1g50300.1 68414.m05639 zinc finger (Ran-binding) family protein /
RNA recognition motif (RRM)-containing protein similar
to SP|Q27294 RNA-binding protein cabeza {Drosophila
melanogaster}; contains Pfam profiles: PF00076 RNA
recognition motif (aka RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 372
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -3
Query: 270 GDCGALNRKEPNGGFAYGIPWKL*KAFPDGLFTIRPWSCP-CSTV 139
G GA + GG G P K P GLF W+CP C V
Sbjct: 171 GSMGAGRGRGRGGGADGGAPGKQPSGAPTGLFGPNDWACPMCGNV 215
>At4g21430.1 68417.m03097 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 728
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -3
Query: 252 NRKEPNGGFAYGIPWKL*KAFPDGLFTIRPWSCPCSTVT 136
N+K+ NGGF+ + +L + P+G+ I P S S V+
Sbjct: 137 NKKKSNGGFSEFVGEELTRVLPNGIMAISPPSPTTSNVS 175
>At3g48690.1 68416.m05317 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 324
Score = 29.9 bits (64), Expect = 1.6
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Frame = +2
Query: 350 YVGDENCLFLNVYTPSTDGAF----LPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDVVVM 517
Y D N L + +Y P A LP++++ HGGGF + + P + V
Sbjct: 47 YSADNN-LSVRIYLPEKAAAETDSKLPLLVYFHGGGFIIETA----FSPTYHTFLTTSVS 101
Query: 518 TINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNI 634
N C A+ PE P + D A++WV +I
Sbjct: 102 ASN--CVAVSVDYRRAPEHPISVPFDDSWTALKWVFTHI 138
>At3g59030.1 68416.m06579 transparent testa 12 protein (TT12) /
multidrug transporter-like protein similar to ripening
regulated protein DDTFR18 [Lycopersicon esculentum]
GI:12231296, putative multidrug efflux protein NorM -
Vibrio parahaemolyticus, EMBL:AB010463; contains Pfam
profile PF01554: Uncharacterized membrane protein
family; identical to cDNA multidrug transporter-like
protein (tt12) GI:13624642, SP|Q9LYT3 TRANSPARENT TESTA
12 protein {Arabidopsis thaliana}, multidrug
transporter-like protein [Arabidopsis thaliana]
GI:13624643
Length = 507
Score = 29.5 bits (63), Expect = 2.1
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +1
Query: 418 GHDLDPRWWVQVGIRQYQLVWT 483
G + PRWW+++ + + +L+WT
Sbjct: 36 GSTVTPRWWLKLAVWESKLLWT 57
>At5g62180.1 68418.m07805 expressed protein similar to PrMC3, Pinus
radiata, GI:5487873
Length = 327
Score = 29.1 bits (62), Expect = 2.8
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +2
Query: 413 LPVMIWIHGGGFKWGSGNTNLYGPDFL--VDRDV--VVMTINYRCGALGFLSLNTPEVPG 580
LP++++ HGGGF S + L+ DF V RD+ +V++ +YR PE
Sbjct: 80 LPIVVYYHGGGFILCSVDMQLF-HDFCSEVARDLNAIVVSPSYRL---------APEHRL 129
Query: 581 NAGIKDIVQAIRWVK 625
A D V+A+ W+K
Sbjct: 130 PAAYDDGVEALDWIK 144
>At1g19190.1 68414.m02389 expressed protein contains similarity to
anther-specific and pathogenesis response protein
(PrMC3) GI:5487873 from [Pinus radiata]
Length = 318
Score = 28.7 bits (61), Expect = 3.7
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 9/104 (8%)
Frame = +2
Query: 362 ENCLFLNVYTPS-----TDGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVD----RDVVV 514
E L L +Y P T +P++++ HGGGF + + +Y FL D +
Sbjct: 50 EKNLSLRIYLPQNSVYETGEKKIPLLVYFHGGGFIMETAFSPIY-HTFLTSAVSATDCIA 108
Query: 515 MTINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNIHHFG 646
+++ YR PE P +D AI+W+ +I G
Sbjct: 109 VSVEYR---------RAPEHPIPTLYEDSWDAIQWIFTHITRSG 143
>At3g52250.1 68416.m05742 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 1677
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 2 KHLCNELNKILINNSGVNNEFPTMIS 79
K+LC + + L+NN+ VN FP+++S
Sbjct: 1244 KYLCLKDDNNLVNNAYVNGGFPSLVS 1269
>At3g59610.1 68416.m06651 F-box family protein / jacalin lectin
family protein contains Pfam profile PF01419:
Jacalin-like lectin domain
Length = 521
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 449 KWGSGNTNLYGPDFLVDRDVVVMTINYRC 535
+W S + N Y P + VD D V +T+ C
Sbjct: 290 EWSSLSVNYYPPSYFVDEDKVGLTLVICC 318
>At1g12350.1 68414.m01427 DNA/panthothenate metabolism flavoprotein
family protein contains Pfam domain PF04127: DNA /
pantothenate metabolism flavoprotein
Length = 317
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 115 QDVRVASSHSGARAAPGTDRKQPVREG-LLQFPRNTICE 228
++++V SHSGA D++ V EG LL+ P +TI E
Sbjct: 123 KNIQVHGSHSGAVKMAVMDQQAAVAEGRLLKLPFSTIYE 161
>At1g12050.1 68414.m01391 fumarylacetoacetase, putative similar to
fumarylacetoacetase (Fumarylacetoacetate hydrolase,
Beta-diketonase, FAA)[Rattus norvegicus]
SWISS-PROT:P25093
Length = 421
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 246 CDLRPHNLQNPGTASGMPRRKGTCVLKSIQSSRNPMS 356
C+LRP +L GT SG C+L+ + + P+S
Sbjct: 343 CNLRPGDLLGTGTISGPEPDSYGCLLELTWNGQKPLS 379
>At5g03280.1 68418.m00277 ethylene-insensitive 2 (EIN2) identical to
EIN2 [Arabidopsis thaliana] gi|5231113|gb|AAD41076;
member of the natural resistance-associated macrophage
protein (NRAMP) metal transporter family, PMID:11500563;
metal transport capacity has not been shown,
PMID:11500563, PMID:1038174
Length = 1294
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +2
Query: 95 LDDLRGGRMSESPLVTVEQGQLQGRIVNSPSGKAFYSFQGIPYAKPPLGSLRFKAPQSPE 274
+D L G + SP V + Q+ G N+ + Y Y+ SLR AP S E
Sbjct: 758 IDSLYGLQRGSSPSPLVNRMQMLGAYGNTTNNNNAYELSERRYS-----SLR--APSSSE 810
Query: 275 PWDGIRDATAEG 310
W+ + AT G
Sbjct: 811 GWEHQQPATVHG 822
>At3g48700.1 68416.m05318 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 329
Score = 27.5 bits (58), Expect = 8.6
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
Frame = +2
Query: 362 ENCLFLNVYTPS------TDGAF-LPVMIWIHGGGFKWGSGNTNLYGPDFLV----DRDV 508
+N L L +Y P T+ + LP++++ HGGGF + + Y FL D
Sbjct: 50 DNNLSLRIYLPEKAATAETEASVKLPLLVYFHGGGFLVETAFSPTY-HTFLTAAVSASDC 108
Query: 509 VVMTINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNI 634
V ++++YR PE P D A++WV +I
Sbjct: 109 VAVSVDYR---------RAPEHPIPTSYDDSWTALKWVFSHI 141
>At3g07390.1 68416.m00881 auxin-responsive protein / auxin-induced
protein (AIR12) identical (with 7 residue gap) to
auxin-induced protein AIR12 GI:11357190 [Arabidopsis
thaliana]
Length = 273
Score = 27.5 bits (58), Expect = 8.6
Identities = 25/95 (26%), Positives = 38/95 (40%)
Frame = +2
Query: 305 EGNVCAQIDPVFAKSYVGDENCLFLNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYGP 484
EG + + A+S G +F V P+ GA +W GG G + +GP
Sbjct: 144 EGKLAFDFWNLRAESLSGGRIAIFTTVKVPA--GADSVNQVWQIGGNVTNGRPGVHPFGP 201
Query: 485 DFLVDRDVVVMTINYRCGALGFLSLNTPEVPGNAG 589
D L V+ T + G+ S + PG +G
Sbjct: 202 DNLGSHRVLSFTEDAAPGSAP--SPGSAPAPGTSG 234
>At2g38080.1 68415.m04674 laccase, putative / diphenol oxidase,
putative similar to diphenol oxidase [Nicotiana
tabacum][GI:1685087]
Length = 558
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -2
Query: 280 PGFWRLWGLKSQRTQWGFRIWYSLETVEGLPGRAVYDPSLELP 152
PG W + T WG ++ + +E +G P +++ P +LP
Sbjct: 515 PGVWFMHCHLEVHTTWGLKMAFLVENGKG-PNQSILPPPKDLP 556
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,353,220
Number of Sequences: 28952
Number of extensions: 432853
Number of successful extensions: 1061
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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