Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30841
(703 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 269 4e-71
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 264 2e-69
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 260 3e-68
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 256 5e-67
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 252 6e-66
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 250 3e-65
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 240 2e-62
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 239 6e-62
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 236 3e-61
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 228 9e-59
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 219 5e-56
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 217 2e-55
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 215 1e-54
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 214 2e-54
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 214 2e-54
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 208 8e-53
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 208 8e-53
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 201 1e-50
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 194 2e-48
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 192 9e-48
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 192 9e-48
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 189 5e-47
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 184 1e-45
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 181 1e-44
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 181 2e-44
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 178 9e-44
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 173 3e-42
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 166 4e-40
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 163 5e-39
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 160 3e-38
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 160 3e-38
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 159 8e-38
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 157 2e-37
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 155 8e-37
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 140 2e-32
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 140 4e-32
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 136 4e-31
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 132 8e-30
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 128 2e-28
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 122 1e-26
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 121 1e-26
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 121 2e-26
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 120 3e-26
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 119 8e-26
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 117 2e-25
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 117 2e-25
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 117 3e-25
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 115 1e-24
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 114 2e-24
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 114 2e-24
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 114 2e-24
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 111 1e-23
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 107 3e-22
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 107 3e-22
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 105 8e-22
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 104 2e-21
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 103 4e-21
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 102 1e-20
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 102 1e-20
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 99 5e-20
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 99 5e-20
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 100 7e-20
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 99 9e-20
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 98 2e-19
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 97 4e-19
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 95 2e-18
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 94 3e-18
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 93 8e-18
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 92 1e-17
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 91 3e-17
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 90 4e-17
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 90 6e-17
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 89 7e-17
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 89 1e-16
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 87 4e-16
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 87 5e-16
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 85 2e-15
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 84 3e-15
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 83 6e-15
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 82 1e-14
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 82 1e-14
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 82 1e-14
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 81 3e-14
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 80 5e-14
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 80 6e-14
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 79 8e-14
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 77 3e-13
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 74 4e-12
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 74 4e-12
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 74 4e-12
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 73 7e-12
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 71 2e-11
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 71 3e-11
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 67 5e-10
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 9e-08
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 58 2e-07
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 50 4e-05
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 48 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 46 7e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 0.001
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 44 0.004
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 44 0.005
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 43 0.008
UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 36 0.73
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 34 3.9
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 33 5.1
UniRef50_A5H2T8 Cluster: Cytochrome c oxidase subunit 1; n=1; Pi... 33 5.1
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 33 6.8
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 9.0
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 9.0
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 269 bits (660), Expect = 4e-71
Identities = 140/219 (63%), Positives = 149/219 (68%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+GTSL LLIR ELG PGSLIGDDQIYNTIVTAHA N L+PL+LG
Sbjct: 2 VGTSLSLLIRTELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLG 61
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIF
Sbjct: 62 APDMAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIF 121
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAGISS SFDQ+PLF+ AVGITA AGAIT+
Sbjct: 122 SLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITM 181
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 657
LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 182 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 264 bits (646), Expect = 2e-69
Identities = 138/215 (64%), Positives = 147/215 (68%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+GTSL LLIRAELG PGSLIGDDQIYNTIVTAHA N LVPL+LG
Sbjct: 26 VGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLG 85
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIF
Sbjct: 86 APDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIF 145
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAGISS SFDQ+PLFV AVGITAF AGAIT+
Sbjct: 146 SLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITM 205
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 645
LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 206 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 260 bits (636), Expect = 3e-68
Identities = 136/231 (58%), Positives = 153/231 (66%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
IGT+L LLIRAELG PG+L+GDDQIYN IVTAHA N LVPL++G
Sbjct: 30 IGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIG 89
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIF
Sbjct: 90 APDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIF 149
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAGISS S Q PLFV +V ITA A IT+
Sbjct: 150 SLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITM 209
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++
Sbjct: 210 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVT 260
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 256 bits (626), Expect = 5e-67
Identities = 132/231 (57%), Positives = 150/231 (64%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N LVPL++G
Sbjct: 29 VGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIG 88
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IF
Sbjct: 89 APDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIF 148
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAG+SS S Q PLFV AV +TA A IT+
Sbjct: 149 SLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLPVLAAGITM 208
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISH+++
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVA 259
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 252 bits (617), Expect = 6e-66
Identities = 129/231 (55%), Positives = 150/231 (64%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N LVPL++G
Sbjct: 29 VGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIG 88
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IF
Sbjct: 89 APDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIF 148
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAG+SS + Q PLFV +V +TA A IT+
Sbjct: 149 SLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLPVLAAGITM 208
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVT 259
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 250 bits (612), Expect = 3e-65
Identities = 129/231 (55%), Positives = 150/231 (64%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+GT+L LLIRAELG PG+L+G+D IYN IVTAHA N LVPL++G
Sbjct: 29 LGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIG 88
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IF
Sbjct: 89 APDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIF 148
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAG+SS + Q PLFV +V ITA A IT+
Sbjct: 149 SLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITM 208
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISHI++
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVT 259
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 240 bits (588), Expect = 2e-62
Identities = 124/233 (53%), Positives = 147/233 (63%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G S+ L+IR ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG
Sbjct: 13 LGFSMSLIIRLELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLG 72
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
+PD++FPR+NN+ F + G GTG TVYPPLS + H G SVDL IF
Sbjct: 73 SPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIF 132
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAG SS + D++ LF +V ITA AGAIT+
Sbjct: 133 SLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITM 192
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQE 699
LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILILPGFGIISH+I E
Sbjct: 193 LLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNE 245
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 239 bits (584), Expect = 6e-62
Identities = 125/233 (53%), Positives = 146/233 (62%), Gaps = 2/233 (0%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
IGT+ +LIR EL PG L GD Q+YN I+TAHA N LVP++
Sbjct: 27 IGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVM 86
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLA
Sbjct: 87 IGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLA 146
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IFSLHL+GISS + +LPLFV A+ +TA AGAI
Sbjct: 147 IFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAI 206
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
T+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGFG++SHI+S
Sbjct: 207 TMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVS 259
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 236 bits (578), Expect = 3e-61
Identities = 122/233 (52%), Positives = 146/233 (62%), Gaps = 2/233 (0%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
+GT +LIR EL PG I G+ Q+YN ++TAHA N VP++
Sbjct: 30 MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPIL 89
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+GAPD+AFPR+NNI F +VE G+GTG TVYPPLS +H G +VDLA
Sbjct: 90 IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLA 149
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IFSLHL+G+SS + +LPLFV +V +TAF AGAI
Sbjct: 150 IFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAI 209
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
T+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISHI+S
Sbjct: 210 TMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVS 262
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 228 bits (558), Expect = 9e-59
Identities = 118/233 (50%), Positives = 146/233 (62%), Gaps = 2/233 (0%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
+G + +LIR EL P + L+G+ QIYN ++TAHA N LVP++
Sbjct: 35 LGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIM 94
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+G+PD+AFPR+NNI F +VE G GTG TVYPPLSS +H G +VDLA
Sbjct: 95 IGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLA 154
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IFSLH++G SS S ++PLFV ++ +TAF AGAI
Sbjct: 155 IFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAI 214
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
T+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILPGFG+ISHI+S
Sbjct: 215 TMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVS 267
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 219 bits (535), Expect = 5e-56
Identities = 116/232 (50%), Positives = 141/232 (60%), Gaps = 2/232 (0%)
Frame = +1
Query: 4 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
GT++ L+IR EL PGS L G+ Q++N +V HA N L+PL++
Sbjct: 29 GTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMI 88
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAI
Sbjct: 89 GATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAI 148
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
F+LHL ISS + +LPLFV ++ ITAF + IT
Sbjct: 149 FALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGIT 208
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGFGIISH++S
Sbjct: 209 MLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVVS 260
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 217 bits (531), Expect = 2e-55
Identities = 120/206 (58%), Positives = 138/206 (66%)
Frame = -3
Query: 620 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 441
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 440 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTIL 261
+R I+E PAKC+EKI STD P CAI SGG TVHPVP P STI
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIP 119
Query: 260 LEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIV 81
L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+
Sbjct: 120 LNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMT 179
Query: 80 L*I*SSPINDPGFPNSARIKSLKDVP 3
L I S PI PG PNSARIKSL DVP
Sbjct: 180 L-IWSFPIKLPGCPNSARIKSLSDVP 204
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 215 bits (524), Expect = 1e-54
Identities = 113/232 (48%), Positives = 140/232 (60%), Gaps = 2/232 (0%)
Frame = +1
Query: 4 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
G+++ ++IR EL PGS L G+ Q++N +V HA N ++PL++
Sbjct: 29 GSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMI 88
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
GA D++FPRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAI
Sbjct: 89 GATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAI 148
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
FSLHL ISS S ++PLFV A+ ITAF + IT
Sbjct: 149 FSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSAGIT 208
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+PGFGI+SHI+S
Sbjct: 209 MLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSHIVS 260
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 214 bits (523), Expect = 2e-54
Identities = 117/232 (50%), Positives = 136/232 (58%), Gaps = 1/232 (0%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
IGT+ +LIR EL PG I D+Q+YN+I+TAHA N L+PL L
Sbjct: 29 IGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGL 88
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
G PD+ FPR+NNI + +ENG GTG T+YPPLS +H G SVDLAI
Sbjct: 89 GGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAI 148
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
F LHL+GISS +L LF AV ITA AG IT
Sbjct: 149 FGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLPVLAGGIT 208
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGFGIIS IS
Sbjct: 209 MVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGIISTTIS 260
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 214 bits (522), Expect = 2e-54
Identities = 113/207 (54%), Positives = 127/207 (61%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
IGT+L LLIR ELG PGS IG+DQ+YN +VTAHA N LVPL+LG
Sbjct: 12 IGTALSLLIRVELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLG 71
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIF
Sbjct: 72 APDMAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIF 131
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAG+SS + + LFV +V ITA AGAIT+
Sbjct: 132 SLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITM 191
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF 621
LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 192 LLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 208 bits (509), Expect = 8e-53
Identities = 109/211 (51%), Positives = 129/211 (61%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
IGT+ +LIR EL +PGS++GDD +YN IVTAHA N VPL++G
Sbjct: 30 IGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIG 89
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIF
Sbjct: 90 APDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIF 149
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAG+SS + ++PLFV +V ITA AGAIT+
Sbjct: 150 SLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAGAITM 209
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 633
LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 210 LLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 208 bits (509), Expect = 8e-53
Identities = 110/232 (47%), Positives = 136/232 (58%), Gaps = 1/232 (0%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
+GT+ +LIR EL PG I D+Q+YN+I+T+H N L+P+++
Sbjct: 55 LGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILI 114
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
G PD+AFPR+NN+ + I+ENG GTG T+YPPLS +H VDL I
Sbjct: 115 GGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGI 174
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
F LHL+GISS +L LF AV ITA A AIT
Sbjct: 175 FGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAIT 234
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+PGFGIIS +IS
Sbjct: 235 MLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGIISTVIS 286
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 201 bits (491), Expect = 1e-50
Identities = 107/229 (46%), Positives = 126/229 (55%), Gaps = 2/229 (0%)
Frame = +1
Query: 13 LRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 186
L +L+R EL PG L G+ YN I T H N VP+++GAP
Sbjct: 35 LSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAP 94
Query: 187 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 366
D++FPR+NN F E G GTG TVYPPLSS +H G SVDL IFS
Sbjct: 95 DMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSF 154
Query: 367 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILL 546
HL GI S LPLFV +V +T+F A AIT+LL
Sbjct: 155 HLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAIPVLAAAITLLL 214
Query: 547 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILILPGFG++SHII+
Sbjct: 215 FDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSHIIA 263
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 194 bits (473), Expect = 2e-48
Identities = 106/209 (50%), Positives = 123/209 (58%), Gaps = 2/209 (0%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
IGT+ +LIR EL PG L GD Q+YN I+TAHA N LVP++
Sbjct: 27 IGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVM 86
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLA
Sbjct: 87 IGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLA 146
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IFSLHL+GISS + +LPLFV A+ +TA AGAI
Sbjct: 147 IFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAI 206
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF 621
T+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 207 TMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 192 bits (467), Expect = 9e-48
Identities = 99/232 (42%), Positives = 136/232 (58%), Gaps = 2/232 (0%)
Frame = +1
Query: 1 IGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
+G SL +L+R EL NP L+ + Q++N ++TAHA N LVPL
Sbjct: 45 VGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQ 104
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+A
Sbjct: 105 IGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMA 164
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IF+LHL+G+SS + +LPLFV +V ITA A +
Sbjct: 165 IFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGL 224
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+
Sbjct: 225 TMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV 276
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 192 bits (467), Expect = 9e-48
Identities = 99/232 (42%), Positives = 136/232 (58%), Gaps = 2/232 (0%)
Frame = +1
Query: 1 IGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
+G SL +L+R EL NP L+ + Q++N ++TAHA N LVPL
Sbjct: 45 VGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQ 104
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+A
Sbjct: 105 IGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMA 164
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IF+LHL+G+SS + +LPLFV +V ITA A +
Sbjct: 165 IFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGL 224
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+
Sbjct: 225 TMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV 276
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 189 bits (461), Expect = 5e-47
Identities = 108/236 (45%), Positives = 134/236 (56%), Gaps = 5/236 (2%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
+GT+ +LIR EL PG I ++Q+YN+I+TAHA N L+PL++
Sbjct: 57 LGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMI 116
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSV 345
G PD+AFPR+NNI F I+E G GTG T+ YPPLS +H G SV
Sbjct: 117 GGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSV 176
Query: 346 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 525
DLAIF+LHL+G+SS +L LF A +
Sbjct: 177 DLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALFGWATWSSRSRYFL------ 230
Query: 526 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS
Sbjct: 231 -GITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTIS 285
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 184 bits (449), Expect = 1e-45
Identities = 92/224 (41%), Positives = 128/224 (57%), Gaps = 2/224 (0%)
Frame = +1
Query: 28 RAELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 201
+A LG L G D ++N ++T H N +PL++GAPD+AFP
Sbjct: 142 QALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFP 201
Query: 202 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 381
R+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 202 RLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGA 261
Query: 382 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 561
SS + ++PLF +V +TA+ AGAIT+LLTDRN
Sbjct: 262 SSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNF 321
Query: 562 NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++
Sbjct: 322 GTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVA 365
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 181 bits (441), Expect = 1e-44
Identities = 101/221 (45%), Positives = 125/221 (56%), Gaps = 2/221 (0%)
Frame = +1
Query: 4 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
GT++ L+IR EL PGS L G+ Q++N +V HA N L+PL++
Sbjct: 29 GTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMI 88
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAI
Sbjct: 89 GATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAI 148
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
F+LHL ISS + +LPLFV ++ ITAF + IT
Sbjct: 149 FALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGIT 208
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 660
+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 209 MLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 181 bits (440), Expect = 2e-44
Identities = 99/194 (51%), Positives = 114/194 (58%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N L+PL++G
Sbjct: 18 VGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIG 77
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IF
Sbjct: 78 APDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIF 137
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAGISS S Q PLFV AV ITA A IT+
Sbjct: 138 SLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAGITM 197
Query: 541 LLTDRNLNTSFFDP 582
LLTDRNLNT+FFDP
Sbjct: 198 LLTDRNLNTTFFDP 211
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 178 bits (434), Expect = 9e-44
Identities = 110/251 (43%), Positives = 136/251 (54%), Gaps = 20/251 (7%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPG-------SLIGD------DQIY---NTIVTAHAXXXXXXXXXX 132
IG ++ L+RAEL PG + D DQ Y N ++TAH
Sbjct: 53 IGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHLWNVLITAHGLIMVFFMVMP 112
Query: 133 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TV 300
N VP+++GAPD+AFPR+NNI F V NGAGTG TV
Sbjct: 113 AMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTV 172
Query: 301 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 480
Y PLS++ G +VD+AI SLH+AG SS + ++PLFV +V
Sbjct: 173 YAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSV 231
Query: 481 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 660
+TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+IL
Sbjct: 232 LVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMIL 291
Query: 661 PGFGIISHIIS 693
PGFGIIS I+S
Sbjct: 292 PGFGIISQIVS 302
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 173 bits (421), Expect = 3e-42
Identities = 95/212 (44%), Positives = 120/212 (56%), Gaps = 2/212 (0%)
Frame = +1
Query: 4 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
GT++ L+IR EL PG L G++Q++N +V HA N ++PL++
Sbjct: 29 GTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMI 88
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
GA D AFPRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAI
Sbjct: 89 GATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAI 148
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
F+LH+ ISS + +LPLFV A+ ITA + +T
Sbjct: 149 FALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVLSAGVT 208
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 633
+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 209 MLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 166 bits (404), Expect = 4e-40
Identities = 95/222 (42%), Positives = 120/222 (54%), Gaps = 2/222 (0%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
IGT L +IR EL N GS L G+ Q +N ++TAHA N L+PL+
Sbjct: 33 IGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLM 92
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
LGA D+AF R+NNI F +VE GAGTG TVY PL+ +H G +VDLA
Sbjct: 93 LGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLA 152
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IFSLHL+G SS ++ +PLF AV TA A +
Sbjct: 153 IFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGL 212
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 660
T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 213 TMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 163 bits (395), Expect = 5e-39
Identities = 89/224 (39%), Positives = 125/224 (55%), Gaps = 4/224 (1%)
Frame = +1
Query: 1 IGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
+G SL +L+R EL NP L+ + Q++N ++TAHA N LVPL
Sbjct: 45 VGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQ 104
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+A
Sbjct: 105 IGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMA 164
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IF+LHL+G+SS + +LPLFV +V ITA A +
Sbjct: 165 IFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGL 224
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYILIL 660
T+LL DRN NTSFF +GGGDP+LY+H+F FFG P + I+I+
Sbjct: 225 TMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 160 bits (389), Expect = 3e-38
Identities = 87/231 (37%), Positives = 117/231 (50%), Gaps = 2/231 (0%)
Frame = +1
Query: 4 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
G+ L +LIR EL +PG G Q+YN+++T H N ++PL+L
Sbjct: 39 GSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLML 98
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
GAP++AFPR+N + F + G G+ T YPPLS S+D I
Sbjct: 99 GAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMI 157
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
LH GI S + DQ+ +FV +T+F AG++
Sbjct: 158 LGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLL 217
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS +
Sbjct: 218 FLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIISEAV 268
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 160 bits (389), Expect = 3e-38
Identities = 88/232 (37%), Positives = 115/232 (49%), Gaps = 2/232 (0%)
Frame = +1
Query: 1 IGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
+G L IR EL G L GD Q YN ++T+H N +P++
Sbjct: 30 VGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVM 89
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
G PD+ FPR+NN+ F + E G G G T+YP L H + D
Sbjct: 90 AGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFV 149
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
+F++HL GISS SF LF+ A ITA AG +
Sbjct: 150 MFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGV 209
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP FG+IS I+
Sbjct: 210 TLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIV 261
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 159 bits (385), Expect = 8e-38
Identities = 87/156 (55%), Positives = 96/156 (61%)
Frame = +1
Query: 169 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 348
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 349 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 528
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 529 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 636
AIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 124 AITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 157 bits (382), Expect = 2e-37
Identities = 86/230 (37%), Positives = 120/230 (52%), Gaps = 1/230 (0%)
Frame = +1
Query: 4 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 183
G SL +R EL +PG + +Y++I+T HA N +PL++
Sbjct: 32 GLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKI 91
Query: 184 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 363
D++ PR+NN+ + G G G T+YPPLS++ G +DLA+FS
Sbjct: 92 KDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFS 151
Query: 364 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXXXXXXXXAGAITI 540
LH+AG+SS F L P+ + + T+ A +T+
Sbjct: 152 LHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTSVPVLAAGLTL 211
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+
Sbjct: 212 LLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHIL 261
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 155 bits (377), Expect = 8e-37
Identities = 90/227 (39%), Positives = 125/227 (55%), Gaps = 2/227 (0%)
Frame = +1
Query: 1 IGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
+G SL +L+R EL NP L+ + Q++N ++TAHA N LVPL
Sbjct: 45 VGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQ 104
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+A
Sbjct: 105 IGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMA 164
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IF+LHL+G+SS + +LPLFV +V ITA A +
Sbjct: 165 IFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGL 224
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 675
T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 225 TMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 140 bits (340), Expect = 2e-32
Identities = 82/234 (35%), Positives = 118/234 (50%), Gaps = 4/234 (1%)
Frame = +1
Query: 4 GTSLRLLIRAELGNPG-SLIGDDQI--YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
G L +++R EL + +I + + YN I T H N +P++
Sbjct: 32 GFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPIL 91
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDL 351
G+P++A+PRIN+I E G GTG T+YPPLS+++ +VD+
Sbjct: 92 CGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDV 151
Query: 352 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 531
IF L ++G++S + L + ++ IT+ G
Sbjct: 152 IIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILSVSTWSLIITSGMLLLTLPVLTGG 211
Query: 532 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
+ +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 212 VLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 140 bits (338), Expect = 4e-32
Identities = 88/229 (38%), Positives = 110/229 (48%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
IG L LLIR L +P + +YN +VT H N +P+ L
Sbjct: 127 IGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIFLC 186
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
D+ PR+N++ G G G T+YPPLS G VD +F
Sbjct: 187 LDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTLYPPLSI-WEGSGFGVDYLMF 243
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAG+SS S + V A T+ A IT+
Sbjct: 244 SLHLAGVSSLIGSVNFISTIFSRLSFNCS-----IIVWAYLFTSVLLLLSLPVLASGITM 298
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 687
LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI
Sbjct: 299 LLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHI 347
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 136 bits (330), Expect = 4e-31
Identities = 81/234 (34%), Positives = 116/234 (49%), Gaps = 3/234 (1%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPG-SLIGDD--QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 171
IG + +LIR EL G +I D +IYN + T H N L P+
Sbjct: 34 IGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPV 93
Query: 172 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 351
+LG D+ +PR+N +E G+GTG T+YPPLS+++++ G +D
Sbjct: 94 LLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDF 151
Query: 352 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 531
IF L AGI+S D++ ++ +T+F
Sbjct: 152 IIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWSIVLTSFLLLLSLPVVTAV 211
Query: 532 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILPGFGIIS ++S
Sbjct: 212 FLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLS 265
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 132 bits (319), Expect = 8e-30
Identities = 78/178 (43%), Positives = 93/178 (52%), Gaps = 2/178 (1%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
IGT+ +LIR EL PG L GD Q+YN I+TAHA N LVP++
Sbjct: 27 IGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVM 86
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLA
Sbjct: 87 IGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLA 146
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 528
IFSLHL+GISS + +LPLFV A+ +TA AG
Sbjct: 147 IFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 128 bits (308), Expect = 2e-28
Identities = 82/230 (35%), Positives = 110/230 (47%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G S LL R +L P L D +YN VT H N L+P
Sbjct: 26 LGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCN 83
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
PD+ FPR+N + F ++ + A G T YPPLSS SV+ ++F
Sbjct: 84 LPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----LSPSVEFSVF 134
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAGI+S + L LF ++ + + A IT+
Sbjct: 135 SLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSLPVLAVGITL 192
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
+LTD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I
Sbjct: 193 ILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI 242
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 122 bits (293), Expect = 1e-26
Identities = 76/232 (32%), Positives = 107/232 (46%), Gaps = 1/232 (0%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G LLIR EL PG I D YN T H N ++PL+LG
Sbjct: 59 VGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLG 118
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
A D+AFPR+N + ++ G TG T Y P S AH +V +F
Sbjct: 119 AKDVAFPRLNLLSLYIYLAGAVLALWG-MLNGGLDTGWTFYTPYS---AHTTTTVAPVLF 174
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
+ G SS ++ ++PLFV A+ T+ G + +
Sbjct: 175 GAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYATS-CIQVLATPVIGLLLV 233
Query: 541 LLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S +++
Sbjct: 234 LVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA 285
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 121 bits (292), Expect = 1e-26
Identities = 86/238 (36%), Positives = 117/238 (49%), Gaps = 8/238 (3%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G + +L+R EL +PG + + YN+++T+H N L+PL++G
Sbjct: 111 VGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIG 169
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXX--IVEN-GAGTG*TVYPPLS-----SNIAHRG 336
A D+AFPRIN I F I E A TG T+Y PLS N A+ G
Sbjct: 170 ADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGEGMGNQANAG 229
Query: 337 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 516
VDL + LHL+G+S+ S+ L +F + +
Sbjct: 230 --VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLDIFSWTILTQSGLILFAFP 287
Query: 517 XXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+
Sbjct: 288 LLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYIL 343
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 121 bits (291), Expect = 2e-26
Identities = 75/230 (32%), Positives = 104/230 (45%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G LL+R +L P + +++N + T H N VPL++G
Sbjct: 49 VGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIG 107
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
A D+AFPR+N+ F + + G Y PLSS + VD I
Sbjct: 108 ARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWII 167
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
L + GI S S ++PLFV + + A A+ +
Sbjct: 168 GLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILALPALNSALAM 227
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
LL DR L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS +I
Sbjct: 228 LLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI 277
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 120 bits (289), Expect = 3e-26
Identities = 74/237 (31%), Positives = 116/237 (48%), Gaps = 6/237 (2%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLI----GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVP 168
+G + +LIR EL G I + IYN +T H N L+P
Sbjct: 35 LGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIMLFVFIMPVGIGFYGNYLIP 94
Query: 169 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRS 342
+++G +++ PR+N I F ++ +G T+YPPLS+ A G +
Sbjct: 95 MLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVN 154
Query: 343 VDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 522
+DL++ +H+ GISS +F + ++ ++ +T+
Sbjct: 155 IDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIVTSILLIGSLPIL 214
Query: 523 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++
Sbjct: 215 GVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILT 269
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 119 bits (286), Expect = 8e-26
Identities = 78/230 (33%), Positives = 102/230 (44%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
IG S +R EL P ++YN ++T H N L+PL++G
Sbjct: 44 IGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVG 102
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
D+AFPR+N + F V G T YPPLS G +L I
Sbjct: 103 TEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGE--ELWIL 159
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SL L G SS +PLF A+ T+ A A+ +
Sbjct: 160 SLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLSTPVLASALIL 219
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
L D TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I
Sbjct: 220 LSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI 269
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 117 bits (282), Expect = 2e-25
Identities = 76/232 (32%), Positives = 107/232 (46%), Gaps = 1/232 (0%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
+G L LL+R +L P + IG D+ YN I T H LVPL++
Sbjct: 46 LGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMV 103
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
G IAFPR+N + V+ G G Y PLS G+ D+
Sbjct: 104 GTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWA 163
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
+ +S+ S D++PLFV ++ +T+F A T
Sbjct: 164 QMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPAIMIAST 223
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP G++S I++
Sbjct: 224 SLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVA 275
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 117 bits (282), Expect = 2e-25
Identities = 72/232 (31%), Positives = 104/232 (44%), Gaps = 3/232 (1%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G L +++R EL P + + D +YN + T H N L+P ++G
Sbjct: 53 VGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIG 111
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNIAHRGRSVDL 351
APD+AFP++N F G A +G YPP+S + + H L
Sbjct: 112 APDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEFL 171
Query: 352 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 531
I ++ L+GISS F ++P+FV G
Sbjct: 172 WILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTGG 231
Query: 532 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 687
+LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S +
Sbjct: 232 AVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSEL 283
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 117 bits (281), Expect = 3e-25
Identities = 70/212 (33%), Positives = 96/212 (45%), Gaps = 6/212 (2%)
Frame = +1
Query: 76 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 255
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 256 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 432
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 433 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGD 597
++ +LPL + + +TA A +LL DR+ T FF GGGD
Sbjct: 206 APGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGD 265
Query: 598 PILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
PIL+QHLF FGHPEVYI+ILP +GI+ ++S
Sbjct: 266 PILWQHLFWIFGHPEVYIMILPAWGILGDVLS 297
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 115 bits (277), Expect = 1e-24
Identities = 70/215 (32%), Positives = 99/215 (46%)
Frame = +1
Query: 46 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 225
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 226 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 405
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 406 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA 585
+F + LFV + AGA+T+L D+ L T+FF+PA
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPA 179
Query: 586 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 180 KGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 114 bits (275), Expect = 2e-24
Identities = 70/230 (30%), Positives = 102/230 (44%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G LLIR EL PG I D YN + T H N L+P+++G
Sbjct: 52 LGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIG 111
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
A D+AFP++N + F +V+ GA TG T Y P S+ + V L F
Sbjct: 112 AKDVAFPKLNLLSFYVYLAGAVVALFG-MVQGGADTGWTFYTPYSTTTITKVVPVLLGAF 170
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
L G SS + +LPLFV ++ T+ ++ +
Sbjct: 171 IL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYATSVIQILATPVLGMSLLL 227
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
+ + FDPA GGDP+L+QH F F+ HP VYI++LP +IS ++
Sbjct: 228 VAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVV 277
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 114 bits (275), Expect = 2e-24
Identities = 75/230 (32%), Positives = 100/230 (43%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
IG LL+R +LG P + +YN + T H N +VPL++G
Sbjct: 48 IGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIG 106
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
A D+AFPR+N + V G Y PL+ VD I
Sbjct: 107 ARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVDYWIV 166
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
+ L G++S + +++PLFV + AF A
Sbjct: 167 GIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQLVVAFILIFAFPVLTVATIQ 226
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP GIIS ++
Sbjct: 227 LLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL 276
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 114 bits (275), Expect = 2e-24
Identities = 75/231 (32%), Positives = 103/231 (44%), Gaps = 1/231 (0%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G + LLIRAEL PG ++ +N + T H N ++PL +G
Sbjct: 55 LGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIG 113
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAHRGRSVDLAI 357
APD+AFPR+N F + GA G T+Y PLS I G D+ I
Sbjct: 114 APDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPGLGSDMWI 173
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
+ GI S + ++P+F + + + A
Sbjct: 174 VGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWNIFVVSVLALLIFPLLLAAAL 233
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
+L DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II
Sbjct: 234 GVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII 283
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 111 bits (268), Expect = 1e-23
Identities = 72/226 (31%), Positives = 104/226 (46%), Gaps = 2/226 (0%)
Frame = +1
Query: 19 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 198
LL+R EL + +YN ++T+H N +PL++ A D+AF
Sbjct: 91 LLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAF 149
Query: 199 PRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 372
PRIN I F ++ A T T+Y PLS ++ +VD+ + LHL
Sbjct: 150 PRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMMMLGLHL 207
Query: 373 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 552
G+S+ + L +F + + A+ +LL D
Sbjct: 208 TGVSATMGAINFIATIFTERGEDVGWPDLDIFSWTMLTQSGLILFAFPLFGSALIMLLLD 267
Query: 553 RNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
RN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+
Sbjct: 268 RNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLIL 312
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 107 bits (257), Expect = 3e-22
Identities = 69/225 (30%), Positives = 96/225 (42%)
Frame = +1
Query: 19 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 198
L++RA+L P + D YN I T H N +VPL +GA D+AF
Sbjct: 76 LMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAF 134
Query: 199 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 378
P +NN+ F ++ G T Y PL+SN G + + L +AG
Sbjct: 135 PYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAG 194
Query: 379 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 558
I + + ++P+F IT A+ +L DR
Sbjct: 195 IGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRL 254
Query: 559 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
FF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS
Sbjct: 255 FGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS 299
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 107 bits (257), Expect = 3e-22
Identities = 74/233 (31%), Positives = 103/233 (44%), Gaps = 2/233 (0%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
I SL LL R +L P S Y VT H N +VPL +G
Sbjct: 38 IAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFASPFAFGLA-NYIVPLQIG 96
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAI 357
A D+AFPR+N + + E+GA G T+Y PL++ I G +DLA
Sbjct: 97 ARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLAA 156
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
++ L +S + ++P+F ++ T
Sbjct: 157 LAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTVILMLWAFPPLMVGGA 216
Query: 538 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVIS 267
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 105 bits (253), Expect = 8e-22
Identities = 57/105 (54%), Positives = 66/105 (62%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
IGT+L LLIRAELG PG+L+GDDQ N IVTAHA N LVPL++G
Sbjct: 30 IGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIG 89
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 315
APD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 90 APDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 104 bits (250), Expect = 2e-21
Identities = 62/230 (26%), Positives = 100/230 (43%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G + IR +L P + Q YN ++T H N +VPL +G
Sbjct: 41 VGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQIG 99
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
A D++FP +N + F + G T Y LS + +G +D +
Sbjct: 100 ARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFVL 157
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
L ++G+ + ++ +LPLF + + + +
Sbjct: 158 GLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGLAL 217
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I
Sbjct: 218 MMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI 267
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 103 bits (247), Expect = 4e-21
Identities = 63/187 (33%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Frame = +1
Query: 154 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 330
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 331 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 510
+ VDL + + +AG SS + LF +V +
Sbjct: 144 KSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTA 203
Query: 511 XXXXAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 675
A +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G+
Sbjct: 204 LPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGL 263
Query: 676 ISHIISQ 696
+S +I +
Sbjct: 264 VSEVIQR 270
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 102 bits (244), Expect = 1e-20
Identities = 58/129 (44%), Positives = 70/129 (54%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+GTSL L+IR ELG PGSL+ DDQ+YN +VTAH N LVPL+LG
Sbjct: 13 LGTSLSLMIRTELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLG 72
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F + G + PL G SVDLAIF
Sbjct: 73 APDMAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIF 130
Query: 361 SLHLAGISS 387
LHLAG+SS
Sbjct: 131 PLHLAGVSS 139
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 102 bits (244), Expect = 1e-20
Identities = 65/226 (28%), Positives = 98/226 (43%), Gaps = 1/226 (0%)
Frame = +1
Query: 19 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 198
LLIR +L P + + YN I+T H N +VPL+LGA D+A
Sbjct: 47 LLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVAL 106
Query: 199 PRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 375
PR+N + GA G T Y P S A VD + ++ L
Sbjct: 107 PRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQSESGVDFYLAAILLL 163
Query: 376 GISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 555
G SS S ++P++V +V + A ++L +R
Sbjct: 164 GFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVLLER 223
Query: 556 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
+ S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S
Sbjct: 224 KIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS 269
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 99 bits (238), Expect = 5e-20
Identities = 66/230 (28%), Positives = 97/230 (42%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G L LL+R +L P + D + YN + + H ++PL+LG
Sbjct: 53 LGVILALLMRLQLAVPENDFMDPETYNQVFSMHGITMMFLFAIPVMEGFAVY-IIPLMLG 111
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
D+ FPR+N + ++ G YPPL+ G +D
Sbjct: 112 TRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGLGLDFYTT 171
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
+ IS+ S +++P+FV AV + +F A +
Sbjct: 172 VVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPPLVIASLM 231
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
L DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S II
Sbjct: 232 LALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSII 280
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 99 bits (238), Expect = 5e-20
Identities = 72/231 (31%), Positives = 104/231 (45%), Gaps = 1/231 (0%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
+G +L LLIRAEL PG+ I D +N + T H N VP+++
Sbjct: 37 LGGALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLIFLFILPFASAVG-NYFVPIMV 95
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
D+A+P++N I F + T PP S I+ G + D+ I
Sbjct: 96 RYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT-----PPYSV-ISAPGPAADMWI 149
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
F L + GISS S Q+PL + ++ A A+
Sbjct: 150 FGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYLSSSLIVLVALPTFAAALL 209
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
+LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++
Sbjct: 210 MLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMV 260
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 99.5 bits (237), Expect = 7e-20
Identities = 67/223 (30%), Positives = 99/223 (44%), Gaps = 15/223 (6%)
Frame = +1
Query: 70 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 249
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 250 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 417
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 418 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----- 582
+ +LPL + A+ ITA A ++L DR + T FF P
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVV 265
Query: 583 ------AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
AGGG P+L+QHLF F+ HP VYI+ILP G++S I++
Sbjct: 266 NNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILA 308
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 99.1 bits (236), Expect = 9e-20
Identities = 66/230 (28%), Positives = 95/230 (41%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G L +LIRA+L P S + YN + T H L+P +LG
Sbjct: 46 VGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLLG 104
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
+ D+AFPR+ F + +G +YPPLSS + G + D +
Sbjct: 105 SRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGINSDFWLI 164
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
+ IS+ S ++P+F +TA +
Sbjct: 165 GITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTAVMILTGFPPLILGSIL 224
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 225 LELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 97.9 bits (233), Expect = 2e-19
Identities = 77/242 (31%), Positives = 104/242 (42%), Gaps = 15/242 (6%)
Frame = +1
Query: 13 LRLLIRAELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 189
L L+R +LG PG+ D Y +T H N L+PL++GA D
Sbjct: 59 LSWLMRLQLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARD 118
Query: 190 IAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP--LSSNIAHRGRSVDLAIF 360
+ FP +N + + V G G G T+YPP + S + + L +
Sbjct: 119 MVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGTPGQDWGIVLMLS 178
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV-GITAFXXXXXXXXXAGAIT 537
SL L I + +LPL V + T G++
Sbjct: 179 SLILFIIGFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMALLAFPALFVGSVM 238
Query: 538 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 687
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +
Sbjct: 239 LLL-DRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 688 IS 693
IS
Sbjct: 298 IS 299
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 97.1 bits (231), Expect = 4e-19
Identities = 67/229 (29%), Positives = 100/229 (43%), Gaps = 2/229 (0%)
Frame = +1
Query: 13 LRLLIRAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 189
+ +LIR EL G I DD +YNT + H N +PL++GA D
Sbjct: 35 MAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKD 94
Query: 190 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 369
+AFPR+N + + + T YPP S I H + FS+
Sbjct: 95 VAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHGNTA--FYTFSVL 151
Query: 370 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG-AITILL 546
L G +S +++L +FV A + AF G A+T+L
Sbjct: 152 LLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLT 210
Query: 547 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 211 FDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 94.7 bits (225), Expect = 2e-18
Identities = 61/224 (27%), Positives = 95/224 (42%)
Frame = +1
Query: 19 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 198
LL+R +L P + + YN + T H L+PL++GA D+ F
Sbjct: 78 LLVRLQLMVPENTFLSSETYNQLFTMHGTIMMFLFAIPMLEGFAVY-LIPLMIGARDLVF 136
Query: 199 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 378
PR+ + + + G +Y PLS++ G S D + + LA
Sbjct: 137 PRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGLSADFWLIGITLAE 196
Query: 379 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 558
I+S S ++P+ + + TAF +L +R
Sbjct: 197 IASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPPLIIGSILLEAERL 256
Query: 559 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++
Sbjct: 257 LGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATML 300
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 94.3 bits (224), Expect = 3e-18
Identities = 64/230 (27%), Positives = 96/230 (41%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
IG L +LIRA+L +P S + Y + T H L+P +LG
Sbjct: 46 IGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFLFAIPMFEGLTIY-LLPKMLG 104
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
+ D+A+PR++ F + +G +YPPL+S + G + D +
Sbjct: 105 SRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGINSDFWLL 164
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
+ IS+ S D++P++ +TA +
Sbjct: 165 GITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIYGWYALVTATMILTGFPPLILGSIL 224
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 225 LELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 92.7 bits (220), Expect = 8e-18
Identities = 57/180 (31%), Positives = 82/180 (45%)
Frame = +1
Query: 154 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 333
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 334 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 513
VD I++L ++GI + +P+F
Sbjct: 185 DVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFTWTCTWANVLIATSF 244
Query: 514 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S
Sbjct: 245 PILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVS 304
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 91.9 bits (218), Expect = 1e-17
Identities = 64/227 (28%), Positives = 94/227 (41%), Gaps = 4/227 (1%)
Frame = +1
Query: 22 LIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 201
++R +L PG + + +N + T HA N +PL++GA D+AFP
Sbjct: 53 IMRLQLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFP 111
Query: 202 RINNIRFXXXXXXXXXXXXXXIVENGAG----TG*TVYPPLSSNIAHRGRSVDLAIFSLH 369
R+N + ++ G G Y L+S G D L
Sbjct: 112 RLNAFSYWIYLFGALFINAGWLMGTAGGHVPDIGWFGYANLTSVQFTSGLGPDFWTLGLL 171
Query: 370 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 549
L GI + + ++P+FV +T+ A+ +L+
Sbjct: 172 LLGIGTLVSGFNFIVTILNMRAPGMTLMKMPVFVWTTLVTSAIIIFAFPSVTVALIMLMF 231
Query: 550 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
DR +FF+ GG + YQHLF FGHPEVYILILP GIIS +I
Sbjct: 232 DRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVI 278
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 90.6 bits (215), Expect = 3e-17
Identities = 62/221 (28%), Positives = 93/221 (42%)
Frame = +1
Query: 19 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 198
L++R +L P + + Y+++ T H N L PL+LG+ D+AF
Sbjct: 72 LVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFLYALPVLSGFA-NYLWPLMLGSRDMAF 130
Query: 199 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 378
PR+ + + G Y PL+S G ++D+ + L G
Sbjct: 131 PRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSAGANIDIYGLGMILLG 190
Query: 379 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 558
IS+ S D+LP+ V + + A +L DRN
Sbjct: 191 ISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRN 250
Query: 559 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 681
T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 251 AGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 90.2 bits (214), Expect = 4e-17
Identities = 64/227 (28%), Positives = 93/227 (40%), Gaps = 1/227 (0%)
Frame = +1
Query: 13 LRLLIRAELGNP-GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 189
L L++R +L P L+G D YN I T H L+P +L A D
Sbjct: 60 LGLIMRTQLAVPENDLVGQD-FYNQIFTVHGTTMMFLFAVPVVEALGVM-LLPQMLAARD 117
Query: 190 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 369
+ FPR++ + G +YPPL+ G + D + +
Sbjct: 118 LPFPRLSAFAIWAYIVGGLVFFSTVFYDLAPKGGWFMYPPLTLKEYSPGDNADFWLLGIG 177
Query: 370 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 549
IS+ S ++P+F A+ I A A +L
Sbjct: 178 FIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWAMLIFAAMIMIAFPAVILATMLLEI 237
Query: 550 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
+R+ FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 238 ERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV 284
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 89.8 bits (213), Expect = 6e-17
Identities = 56/180 (31%), Positives = 79/180 (43%)
Frame = +1
Query: 154 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 333
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 334 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 513
G VD I++L L+G+ + +P+F
Sbjct: 184 GVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASF 243
Query: 514 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S
Sbjct: 244 PILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTS 303
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 89.4 bits (212), Expect = 7e-17
Identities = 71/241 (29%), Positives = 105/241 (43%), Gaps = 14/241 (5%)
Frame = +1
Query: 13 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 192
LR ++ + G L + + Y +VT H N L+PL +GA D+
Sbjct: 83 LRPILGGWITEAGKL--EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDM 140
Query: 193 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIF 360
A +N + + +E G +G +YPPLS+ ++ G + + +
Sbjct: 141 ASGFMNMLSYWFFFGSSVIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLI 200
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
S+ L IS SF +LPL + A ITA A +
Sbjct: 201 SMALFIISVLLGGINYITTVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALL 260
Query: 541 LLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
L+ DR+L TSFF AG GG P+L+QHLF F GHPEVYI+++P GI S +I
Sbjct: 261 LIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGITSEVI 320
Query: 691 S 693
+
Sbjct: 321 A 321
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 89.0 bits (211), Expect = 1e-16
Identities = 71/208 (34%), Positives = 83/208 (39%)
Frame = +1
Query: 4 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 183
G L R L G +IG QI VTA A L PL +GA
Sbjct: 20 GXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGA 79
Query: 184 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 363
P +A PR+ N+ F + G G VYPP SS +AH +VDL IF
Sbjct: 80 PXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFX 139
Query: 364 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITIL 543
LHLAGISS ++ LF A AIT+L
Sbjct: 140 LHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPVLAAAITML 199
Query: 544 LTDRNLNTSFFDPAGGGDPILYQHLF*F 627
R N SFF P G P + F F
Sbjct: 200 XXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 87.0 bits (206), Expect = 4e-16
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = +1
Query: 556 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIA 236
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 86.6 bits (205), Expect = 5e-16
Identities = 57/180 (31%), Positives = 82/180 (45%), Gaps = 1/180 (0%)
Frame = +1
Query: 154 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 330
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 331 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 510
G +L +L L+G+SS + ++PLFV TA
Sbjct: 139 YGLGTNLIQIALILSGLSSTLTGVNFVMTITKMKKVP--YLKMPLFVWGFFTTAILMIIA 196
Query: 511 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
+ +R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S ++
Sbjct: 197 MPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL 256
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 84.6 bits (200), Expect = 2e-15
Identities = 54/180 (30%), Positives = 80/180 (44%)
Frame = +1
Query: 154 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 333
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 334 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 513
VD +S+ ++GI + F+++ +F+ +
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISF 238
Query: 514 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
+ + DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS
Sbjct: 239 PILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIIS 298
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 84.2 bits (199), Expect = 3e-15
Identities = 57/180 (31%), Positives = 77/180 (42%)
Frame = +1
Query: 154 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 333
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 334 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 513
G VD I+SL LA + S +PLF TA
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
Query: 514 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I S
Sbjct: 264 PPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFS 323
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 83.0 bits (196), Expect = 6e-15
Identities = 49/110 (44%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
IGT+ +LIR EL PG L GD Q+YN I+TAHA N LVP++
Sbjct: 27 IGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVM 86
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 324
+GAPD+AFPR+NNI F VE GAGTG TV LS I
Sbjct: 87 IGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 81.8 bits (193), Expect = 1e-14
Identities = 51/177 (28%), Positives = 78/177 (44%)
Frame = +1
Query: 160 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 339
L+P +LGA D+ FPR++ F V G + PPL++ G
Sbjct: 167 LLPNMLGARDLPFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNPPLTTETYSPGY 226
Query: 340 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 519
+ D + + IS+ + ++P+F A+ + A
Sbjct: 227 NADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPA 286
Query: 520 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 287 VILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV 343
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 81.8 bits (193), Expect = 1e-14
Identities = 67/233 (28%), Positives = 98/233 (42%), Gaps = 16/233 (6%)
Frame = +1
Query: 40 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 219
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 220 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS--NIAHRGRSVDLAIFSLHLA--GIS 384
F + +G +G T Y LS+ A G + ++ + +A I+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQTLWGISIAIFCIA 193
Query: 385 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 564
S S ++P+ A IT+ A +L DR
Sbjct: 194 SLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAG 253
Query: 565 TSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI+SHI+
Sbjct: 254 TSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSHIL 306
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 81.8 bits (193), Expect = 1e-14
Identities = 50/137 (36%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Frame = +1
Query: 289 G*TVYPPLSSNIAHRG-RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 459
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 460 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 639
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 640 EVYILILPGFGIISHII 690
EVY+LI+P FG I+ I+
Sbjct: 403 EVYVLIIPTFGFINMIV 419
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 4 GTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
G +L +IR EL +P S GD Y +VTAH N L+P +
Sbjct: 78 GAALATMIRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHV 137
Query: 178 GAPDIAFPRINNIRF 222
G+ D+A+PR+N+I F
Sbjct: 138 GSKDVAYPRLNSIGF 152
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 81.0 bits (191), Expect = 3e-14
Identities = 58/231 (25%), Positives = 87/231 (37%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G L L IR +L P + YN ++T HA N +PL LG
Sbjct: 49 LGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLG 108
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
D+A PR+N G T Y PL+ + G SV +
Sbjct: 109 VRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTFYYPLTMDGNQTGVSVFMVAV 168
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
L+ G+ S ++P+F ++ T+ A +
Sbjct: 169 ILN--GLGSLLGSANFAATIVNLRAPGMGLWKMPVFAWSIFATSILQLLTLGGLTAAALL 226
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
+ L S F+P GG P+LYQ F F+ HP VY+++LP GI + + S
Sbjct: 227 TYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS 277
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +1
Query: 169 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 348
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 349 LAIFS 363
LAI+S
Sbjct: 61 LAIYS 65
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +3
Query: 468 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 635
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 79.8 bits (188), Expect = 6e-14
Identities = 57/222 (25%), Positives = 88/222 (39%), Gaps = 14/222 (6%)
Frame = +1
Query: 70 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 249
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 250 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 420
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 421 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG---- 588
+F +LP+ + + ITA + + DR T FF P+G
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVIN 269
Query: 589 -------GGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
GG P+L+QHLF F+ HP VYI++LP G++S ++S
Sbjct: 270 NAAPTVGGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 79.4 bits (187), Expect = 8e-14
Identities = 55/226 (24%), Positives = 89/226 (39%)
Frame = +1
Query: 13 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 192
L +L+R +L PG+ +N T H L+P +LGA D+
Sbjct: 78 LAVLMRVQLAVPGNDFLSADRFNQFFTMHGSAMMFLFAVPMFEAISII-LLPALLGARDL 136
Query: 193 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 372
FPR++ + + + +G +YPPL++ G D+ + L
Sbjct: 137 PFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGLGSDIWLLGLSF 194
Query: 373 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 552
++S + +PL+ V + + +
Sbjct: 195 IEVASIAAAVELIVGVLKCRPPGMRVNLMPLYAWYVLVVGGMILFAFPPLIAGDLLFEME 254
Query: 553 RNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 255 RGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 77.4 bits (182), Expect = 3e-13
Identities = 35/49 (71%), Positives = 36/49 (73%)
Frame = +3
Query: 555 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRK 701
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSK 55
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 73.7 bits (173), Expect = 4e-12
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
+GT +LIR EL PG+ I G+ Q+YN ++TAHA N VP++
Sbjct: 31 MGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPIL 90
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 300
+G+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 91 IGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 73.7 bits (173), Expect = 4e-12
Identities = 45/110 (40%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
IGT L +IR EL N GS L G+ Q +N ++TAHA N L+PL+
Sbjct: 33 IGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLM 92
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 324
LGA D+AF R+NNI F +VE GAGTG TV SS +
Sbjct: 93 LGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 73.7 bits (173), Expect = 4e-12
Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 1/179 (0%)
Frame = +1
Query: 160 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 336
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 337 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 516
D A ++ L GI + LPLFV AV A
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFP 230
Query: 517 XXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 693
G +LL ++ S++ GG +++++LF +FGHPEVY+L+LPG G + +S
Sbjct: 231 EITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 72.9 bits (171), Expect = 7e-12
Identities = 50/179 (27%), Positives = 76/179 (42%)
Frame = +1
Query: 154 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 333
N +VPL +GA D+AFP +N + V + + G PL+
Sbjct: 143 NIIVPLQIGARDMAFPYLNAVGLWLTAVAAALVMLSLFVGDFSHDGWIGLIPLTELPYSP 202
Query: 334 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 513
G VD ++++ + + + ++ +LP V T
Sbjct: 203 GVGVDYWMWAIQIGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLTTNIIALTAF 262
Query: 514 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II
Sbjct: 263 PILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 71.3 bits (167), Expect = 2e-11
Identities = 60/239 (25%), Positives = 92/239 (38%), Gaps = 13/239 (5%)
Frame = +1
Query: 4 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 183
G L LL R EL + G+ + YN V+ H N LVPL +GA
Sbjct: 40 GGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFISPFAFGFA-NYLVPLQIGA 98
Query: 184 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN--IAHRGRSVDLAI 357
D+AFPR+N + + G T+Y PL++ I G +
Sbjct: 99 DDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNTPAYIPGEGLGATSVV 158
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
+L + + +P+F ++ +T + A+
Sbjct: 159 LALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLSINLTVWMMLFAFAALLAALM 218
Query: 538 ILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 681
IL +D L T++F D G +L+ HLF FFGHPEVYI+ P G+++
Sbjct: 219 ILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGHPEVYIVFFPALGVMA 277
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +1
Query: 307 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 486
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 487 TAFXXXXXXXXXAGAITILLTDR 555
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 35.1 bits (77), Expect = 1.7
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +3
Query: 141 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 266
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 66.9 bits (156), Expect = 5e-10
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Frame = +1
Query: 4 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
GT++ ++IR EL PG+ L G+ Q++N +V HA N L+PL++
Sbjct: 29 GTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMI 88
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 300
GA D++F R+NNI F +VE+GAGTG TV
Sbjct: 89 GASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 265 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 387
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +1
Query: 451 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 630
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 631 GHPEVYILIL 660
GH +V LIL
Sbjct: 72 GHTDVLFLIL 81
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 50.4 bits (115), Expect = 4e-05
Identities = 20/23 (86%), Positives = 23/23 (100%)
Frame = +1
Query: 625 FFGHPEVYILILPGFGIISHIIS 693
FFGHPEVYILILPGFG+ISHI++
Sbjct: 2 FFGHPEVYILILPGFGMISHIVA 24
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 48.4 bits (110), Expect = 2e-04
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +3
Query: 612 TFILIFWTS*SLYFNFTRIWYNFSYYFTRK 701
+ ++IFW+S SLYFN IWYNF YY+T K
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSK 31
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 471 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 623
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 46.4 bits (105), Expect = 7e-04
Identities = 41/177 (23%), Positives = 65/177 (36%)
Frame = +1
Query: 160 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 339
L+PL+LG ++ FP++ + + G TG YPPL+ N G
Sbjct: 180 LIPLMLGTRNVVFPKLLGLSWWLLPPATFAVFMSPTT-GGFQTGWWGYPPLAQN---SGS 235
Query: 340 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 519
+ + ++S S ++P+FV + A
Sbjct: 236 GIVWYVLGAATILVASLLGAINIAGTMVYMRAKGMSLGRVPIFVWGLFAAATTLVVESPA 295
Query: 520 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 690
+ L+D + F+ G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 296 TYTGALMDLSDMIAGSHFYT-GPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 625 FFGHPEVYILILPGFGIISHI 687
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 44.0 bits (99), Expect = 0.004
Identities = 34/123 (27%), Positives = 41/123 (33%)
Frame = +3
Query: 198 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTTFSX 377
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPTSCS 138
Query: 378 XXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIINRSK 557
CM +YS + S+YNI K
Sbjct: 139 SVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTSFSPSIGSSHYNITYWPK 198
Query: 558 LKY 566
KY
Sbjct: 199 PKY 201
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +1
Query: 1 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHA 102
IG+S+ +LIR EL GS++ +QIYNT+VT+HA
Sbjct: 13 IGSSMSMLIRLELETCGSVLRSEQIYNTLVTSHA 46
Score = 37.1 bits (82), Expect = 0.42
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +1
Query: 334 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 513
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 514 XXXAGAITILLTDRNLNT 567
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +1
Query: 640 EVYILILPGFGIISHIISQE 699
EVYILILPGFG+ISHIISQE
Sbjct: 155 EVYILILPGFGMISHIISQE 174
>UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2;
Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 854
Score = 36.3 bits (80), Expect = 0.73
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +1
Query: 4 GTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHA 102
GT++ L+IR EL PGS L G+ Q++N +V HA
Sbjct: 29 GTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 33.9 bits (74), Expect = 3.9
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 589 GGDPILYQHLF*FFGHPEVYILILPGF 669
G DP+L + LF F GHP VY +LP +
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAY 250
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 595 DPILYQHLF*FFGHPEVYILILPGF 669
+P+L + LF FFGHP VY +LP +
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAY 233
>UniRef50_A5H2T8 Cluster: Cytochrome c oxidase subunit 1; n=1;
Pichia guilliermondii|Rep: Cytochrome c oxidase subunit
1 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 168
Score = 33.5 bits (73), Expect = 5.1
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 1 IGTSLRLLIRAEL--GNPGSLIGDDQIYNTIVTAHA 102
+GT + ++IR EL GN G++Q YN ++T HA
Sbjct: 6 VGTGMSVIIRMELSSGNSQFFHGNNQAYNVLITGHA 41
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 33.1 bits (72), Expect = 6.8
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +3
Query: 483 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 662
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 663 RI 668
I
Sbjct: 154 SI 155
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 9.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 554 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 432
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 9.0
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -3
Query: 608 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 471
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,594,362
Number of Sequences: 1657284
Number of extensions: 9339820
Number of successful extensions: 21334
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 19599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21031
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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