Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30838
         (549 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p...    27   8.9  
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p...    27   8.9  
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane...    27   8.9  

>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
            K08E5.3b protein.
          Length = 3183

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
 Frame = +3

Query: 288  IHNHCYRGFFC-CLDGWTSPQ 347
            +HN       C C DGWT PQ
Sbjct: 2803 VHNTATNNITCVCTDGWTGPQ 2823


>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
            K08E5.3a protein.
          Length = 3767

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
 Frame = +3

Query: 288  IHNHCYRGFFC-CLDGWTSPQ 347
            +HN       C C DGWT PQ
Sbjct: 3387 VHNTATNNITCVCTDGWTGPQ 3407


>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
            protein K08E5.3b protein.
          Length = 3183

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
 Frame = +3

Query: 288  IHNHCYRGFFC-CLDGWTSPQ 347
            +HN       C C DGWT PQ
Sbjct: 2803 VHNTATNNITCVCTDGWTGPQ 2823


>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
            protein K08E5.3a protein.
          Length = 3767

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
 Frame = +3

Query: 288  IHNHCYRGFFC-CLDGWTSPQ 347
            +HN       C C DGWT PQ
Sbjct: 3387 VHNTATNNITCVCTDGWTGPQ 3407


>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
            adhesion receptorMUA-3 precursor protein.
          Length = 3767

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
 Frame = +3

Query: 288  IHNHCYRGFFC-CLDGWTSPQ 347
            +HN       C C DGWT PQ
Sbjct: 3387 VHNTATNNITCVCTDGWTGPQ 3407


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,004,712
Number of Sequences: 27780
Number of extensions: 272707
Number of successful extensions: 587
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)