Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30838
         (549 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   1.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.7  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            23   2.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   3.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   6.2  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 366 PLNTRWTVGSSTRLSNKKNLCSNGYELILII 274
           PL++R     STR+   +NL  N Y    I+
Sbjct: 278 PLSSRREFAVSTRILRDENLSQNSYHEFQIL 308


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +3

Query: 432 GLSTSHPSWLSLCSPTCPGETGKAF 506
           G   SH +W+   S T PG     F
Sbjct: 540 GSGLSHGNWIYPASMTIPGSNSAVF 564


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 312 FFCCLDGWTSPQSTW 356
           FFC   G+  P+ TW
Sbjct: 42  FFCMATGFPRPEITW 56


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 140 YLYFREQVSKCHLM 181
           Y+Y REQ S+ HL+
Sbjct: 338 YMYSREQYSQSHLI 351


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 318 CCLDGWTSPQSTW 356
           C  DG+  PQ TW
Sbjct: 700 CKADGFPKPQVTW 712


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,852
Number of Sequences: 438
Number of extensions: 3577
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)