Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30836
(714 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HQR7 Cluster: Predicted intramitochondrial sorting pr... 81 4e-14
UniRef50_Q9V579 Cluster: Protein preli-like; n=4; Diptera|Rep: P... 70 7e-11
UniRef50_Q9Y255 Cluster: PRELI domain-containing protein 1, mito... 53 8e-06
UniRef50_UPI0000583FB0 Cluster: PREDICTED: similar to RIKEN cDNA... 49 1e-04
UniRef50_Q502C9 Cluster: Zgc:112317; n=2; Danio rerio|Rep: Zgc:1... 44 0.004
UniRef50_Q08XC1 Cluster: Putative uncharacterized protein; n=1; ... 37 0.43
UniRef50_A5UQY7 Cluster: Putative uncharacterized protein; n=1; ... 37 0.57
UniRef50_A5NYL2 Cluster: Putative uncharacterized protein precur... 37 0.57
UniRef50_Q5JM24 Cluster: Putative uncharacterized protein P0702H... 36 0.99
UniRef50_Q826W7 Cluster: Putative uncharacterized protein; n=3; ... 35 1.7
UniRef50_Q7XRN8 Cluster: OSJNBb0080H08.22 protein; n=4; Oryza sa... 35 2.3
UniRef50_Q0DX88 Cluster: Os02g0768100 protein; n=1; Oryza sativa... 35 2.3
UniRef50_A5NNM6 Cluster: Putative uncharacterized protein; n=1; ... 34 3.0
UniRef50_Q5VMN9 Cluster: Putative uncharacterized protein OSJNBa... 34 3.0
UniRef50_Q0RLH9 Cluster: Putative two-component sensor; n=1; Fra... 33 5.3
UniRef50_Q6JD66 Cluster: Eukaryotic initiation factor-2 alpha ki... 33 5.3
UniRef50_Q62KB8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_Q3JWI9 Cluster: PilL; n=5; Burkholderia|Rep: PilL - Bur... 33 7.0
UniRef50_Q3JTS1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_Q0FX57 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_Q0FWJ6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_Q69SF9 Cluster: Putative uncharacterized protein OJ1112... 33 7.0
UniRef50_A3BE28 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_A2YFL5 Cluster: Putative uncharacterized protein; n=2; ... 33 7.0
UniRef50_UPI0000EBDD17 Cluster: PREDICTED: hypothetical protein;... 33 9.2
UniRef50_UPI0000E80618 Cluster: PREDICTED: hypothetical protein;... 33 9.2
UniRef50_Q4SWY2 Cluster: Chromosome 2 SCAF13355, whole genome sh... 33 9.2
UniRef50_Q9NFA7 Cluster: Putative uncharacterized protein L779.0... 33 9.2
>UniRef50_Q1HQR7 Cluster: Predicted intramitochondrial sorting
protein family member; n=4; Endopterygota|Rep: Predicted
intramitochondrial sorting protein family member - Aedes
aegypti (Yellowfever mosquito)
Length = 213
Score = 80.6 bits (190), Expect = 4e-14
Identities = 36/57 (63%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Frame = +3
Query: 3 QTVAKRSAWIDSQVFGFSRAIRAFGIERFKKNCSQMASGFNHVLHSMYP-RPTSPAS 170
+T+A RSAWIDS VFGF+ AIRAFG++RFKKNC + A+GFN+VL M+P P+S A+
Sbjct: 119 KTIATRSAWIDSSVFGFATAIRAFGLDRFKKNCMKTANGFNYVLQHMFPAHPSSLAA 175
>UniRef50_Q9V579 Cluster: Protein preli-like; n=4; Diptera|Rep:
Protein preli-like - Drosophila melanogaster (Fruit fly)
Length = 236
Score = 69.7 bits (163), Expect = 7e-11
Identities = 32/48 (66%), Positives = 40/48 (83%)
Frame = +3
Query: 6 TVAKRSAWIDSQVFGFSRAIRAFGIERFKKNCSQMASGFNHVLHSMYP 149
T+A R A+I SQVFGFSRAIRAFGIERFK N ++ ++GFN+VL M+P
Sbjct: 121 TLAVRRAYISSQVFGFSRAIRAFGIERFKANGNKASNGFNYVLRRMFP 168
>UniRef50_Q9Y255 Cluster: PRELI domain-containing protein 1,
mitochondrial precursor; n=32; Eumetazoa|Rep: PRELI
domain-containing protein 1, mitochondrial precursor -
Homo sapiens (Human)
Length = 219
Score = 52.8 bits (121), Expect = 8e-06
Identities = 23/66 (34%), Positives = 40/66 (60%)
Frame = +3
Query: 6 TVAKRSAWIDSQVFGFSRAIRAFGIERFKKNCSQMASGFNHVLHSMYPRPTSPASGMALS 185
T +R AW+ S +FG SRA++ FG+ RFK N ++ GF ++L + + +P+ + +
Sbjct: 124 TEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILAKL--QGEAPSKTLVET 181
Query: 186 LKEMRE 203
KE +E
Sbjct: 182 AKEAKE 187
>UniRef50_UPI0000583FB0 Cluster: PREDICTED: similar to RIKEN cDNA
2610524G07 gene; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to RIKEN cDNA 2610524G07 gene -
Strongylocentrotus purpuratus
Length = 204
Score = 49.2 bits (112), Expect = 1e-04
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +3
Query: 6 TVAKRSAWIDSQVFGFSRAIRAFGIERFKKNCSQMASGFNHVLHSMY 146
T +R W++S ++GFSRA+ AFG+ER+K N ++ G +++ ++
Sbjct: 122 TQLERHVWVNSSLYGFSRALMAFGVERYKANLTKSNKGIQYIVDKLF 168
>UniRef50_Q502C9 Cluster: Zgc:112317; n=2; Danio rerio|Rep:
Zgc:112317 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 199
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +3
Query: 18 RSAWIDSQVFGFSRAIRAFGIERFKKNCSQMASGFNHVLHSMYPRPTS 161
R AWI S VFG SR I+ FG+ RF+ N + G H + ++ +S
Sbjct: 126 RQAWISSGVFGLSRPIQEFGLARFRSNQLKAMKGMEHAISNLQKASSS 173
>UniRef50_Q08XC1 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 569
Score = 37.1 bits (82), Expect = 0.43
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 98 LLADGERVQPRPAQHVP-AAHESRLRHGPISEGDARGGRRGHGPCQGQRALVRSE 259
+L G+R QP QHVP AH HG + RGG G QG+ R E
Sbjct: 30 VLRQGDRAQPELRQHVPQQAHRDGQVHGAREAAEGRGGAGDQGERQGRHQGRRGE 84
>UniRef50_A5UQY7 Cluster: Putative uncharacterized protein; n=1;
Roseiflexus sp. RS-1|Rep: Putative uncharacterized
protein - Roseiflexus sp. RS-1
Length = 578
Score = 36.7 bits (81), Expect = 0.57
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 22 RRGSTRRFSASREPYGHS-----ASKGSRRTARRWRAGSTTSCTACTRGPRVPPPAW 177
RR + R S P G S A+ +RR RRWRA +T + TR P PP W
Sbjct: 377 RRPARRARRPSAPPAGRSGRRRPAASDARRRRRRWRASATPAAPGRTRLPLPPPADW 433
>UniRef50_A5NYL2 Cluster: Putative uncharacterized protein
precursor; n=1; Methylobacterium sp. 4-46|Rep: Putative
uncharacterized protein precursor - Methylobacterium sp.
4-46
Length = 1337
Score = 36.7 bits (81), Expect = 0.57
Identities = 36/104 (34%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Frame = -2
Query: 314 PGSLRAYALARVGVVGL-RP--LNGREHXXXXXXXXXXXXLAHLLQR*GHAGGGTRGPRV 144
PG LR +A R G L RP L GR H +R G A GG RG +
Sbjct: 419 PGGLRLFAGGRRGGARLDRPPVLRGRGADRAGLPRRPDLAARHRPRRGGGADGGARGLGL 478
Query: 143 HAVQDVVEPARHLRAVLLEPFDAECPYGSREAENLRVDPRRTLG 12
HA EPAR +R +P A P G R + P R G
Sbjct: 479 HAA--AAEPARRIR----QPLGARLP-GGRALRHRGPQPHRPDG 515
>UniRef50_Q5JM24 Cluster: Putative uncharacterized protein
P0702H08.21; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0702H08.21 - Oryza sativa subsp. japonica (Rice)
Length = 145
Score = 35.9 bits (79), Expect = 0.99
Identities = 19/56 (33%), Positives = 23/56 (41%)
Frame = +1
Query: 4 RPWPSVRRGSTRRFSASREPYGHSASKGSRRTARRWRAGSTTSCTACTRGPRVPPP 171
RP +RR +A P A + TA T C A TR PR+PPP
Sbjct: 28 RPTLQLRRHQREELAACFTPPAAGAGSTAETTAAAGSHAVTAECAAATRRPRLPPP 83
>UniRef50_Q826W7 Cluster: Putative uncharacterized protein; n=3;
Streptomyces|Rep: Putative uncharacterized protein -
Streptomyces avermitilis
Length = 228
Score = 35.1 bits (77), Expect = 1.7
Identities = 23/52 (44%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 16 SVRRGST-RRFSASREPYGHSASKGSRRTARRWRAGSTTSCTACTRGPRVPP 168
S R G T RRFSA R PYG S A R TT+ T T P PP
Sbjct: 4 SFRTGITGRRFSAMRVPYGRSRRTHRNGGAGREGTTMTTTTTPTTTTPTSPP 55
>UniRef50_Q7XRN8 Cluster: OSJNBb0080H08.22 protein; n=4; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBb0080H08.22
protein - Oryza sativa subsp. japonica (Rice)
Length = 900
Score = 34.7 bits (76), Expect = 2.3
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 ARPWPSVRRGSTRRFSASREPYGH---SASKGSRRTARRWRAGSTTSCTACTRGPRVPPP 171
+RP PS RG A R P GH +AS+ R+ R + G T C RG + PP
Sbjct: 291 SRP-PSPPRGGGAERVADRPPAGHKRPAASEAGRKKKRLRKIGQTEPC----RGSFIEPP 345
Query: 172 AWPY 183
W +
Sbjct: 346 KWTF 349
>UniRef50_Q0DX88 Cluster: Os02g0768100 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os02g0768100 protein -
Oryza sativa subsp. japonica (Rice)
Length = 115
Score = 34.7 bits (76), Expect = 2.3
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +1
Query: 19 VRRGSTRRFSASREPYGHSASKGSRRTARRWRAGSTTSCTACTRGPRVP 165
+ R STR AS P +A RRTA W A CTAC+ P +P
Sbjct: 50 MERNSTRTHLASTAPPIVAAY---RRTAEPWPAAGAVLCTACSASPALP 95
>UniRef50_A5NNM6 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium sp. 4-46|Rep: Putative uncharacterized
protein - Methylobacterium sp. 4-46
Length = 166
Score = 34.3 bits (75), Expect = 3.0
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Frame = +2
Query: 29 DRLAG---FRLLASHTGIRHRKVQEELL-ADG-ERVQPRPAQHVPAAHESRLRHGPISEG 193
DRL G L H G+ R+V+ ADG +R Q RP + V +R+ G +EG
Sbjct: 84 DRLLGRDRAALERDHDGVDPRQVEVVARHADGLDRAQARPGEGVGEVGRARVIVGDAAEG 143
Query: 194 DAR--GGRRGHGPCQG 235
+A GG RG G G
Sbjct: 144 EAHRGGGHRGGGHLNG 159
>UniRef50_Q5VMN9 Cluster: Putative uncharacterized protein
OSJNBa0085L11.11; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0085L11.11 - Oryza sativa subsp. japonica (Rice)
Length = 195
Score = 34.3 bits (75), Expect = 3.0
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +1
Query: 22 RRGSTRRFSASREPYGHSASKGSRRTARRWRAGSTTSCTACTRGPRVPPPAWPY 183
RR S RF A+R G+ + + RR R R AC R P PPP P+
Sbjct: 49 RRPSELRFRATRRLRGNLSEEHRRRPLPRRRDCRPQQQRACARAPPGPPPPRPH 102
>UniRef50_Q0RLH9 Cluster: Putative two-component sensor; n=1;
Frankia alni ACN14a|Rep: Putative two-component sensor -
Frankia alni (strain ACN14a)
Length = 511
Score = 33.5 bits (73), Expect = 5.3
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +2
Query: 104 ADGERVQPRPAQHVPAAHESRLRHGPISEGDARGGRRGHGPCQG 235
ADG V PAQH PA H +HGP G A+ H P G
Sbjct: 451 ADGA-VPGNPAQHGPAQH-GPAQHGPAQHGPAQHSPAQHSPALG 492
>UniRef50_Q6JD66 Cluster: Eukaryotic initiation factor-2 alpha
kinase-A; n=1; Toxoplasma gondii|Rep: Eukaryotic
initiation factor-2 alpha kinase-A - Toxoplasma gondii
Length = 5072
Score = 33.5 bits (73), Expect = 5.3
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 43 FSASREPYGHSASKGSRRTARRWRAGSTTSCTACTR 150
FSAS P S+S RRW+ S T CT +R
Sbjct: 655 FSASPSPLDSSSSSSCSSALRRWKLSSPTQCTRSSR 690
>UniRef50_Q62KB8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia mallei|Rep: Putative uncharacterized
protein - Burkholderia mallei (Pseudomonas mallei)
Length = 353
Score = 33.1 bits (72), Expect = 7.0
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 128 RPAQ-HVPAAHESRLRHGPISEGDARGGRRGHGPCQGQRAL 247
RPA+ H P +R G + DAR GR GH QG AL
Sbjct: 298 RPARPHAPDRPAARRSRGRLPREDARAGRLGHARVQGPPAL 338
>UniRef50_Q3JWI9 Cluster: PilL; n=5; Burkholderia|Rep: PilL -
Burkholderia pseudomallei (strain 1710b)
Length = 833
Score = 33.1 bits (72), Expect = 7.0
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +2
Query: 50 LLASHTGIRHRKVQE--ELLADGERVQPRPAQHVPAAHESRLRHGPISEGDARGGR--RG 217
LLA H + R+ ++ E G R PR V R R G G GGR RG
Sbjct: 365 LLADHAAVEEREARDRHEQHERGRREHPRGVARVDLRRIDRERRG--RRGGRGGGRSRRG 422
Query: 218 HGPCQGQR 241
G C+G+R
Sbjct: 423 GGRCRGRR 430
>UniRef50_Q3JTS1 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 475
Score = 33.1 bits (72), Expect = 7.0
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 88 SRRTARRWRAGSTTSCTACTRGP-RVPPPAWPY 183
+RR ARRWR S+T C CTR R PAWP+
Sbjct: 386 ARRCARRWR--SSTPC-GCTRAAMRCNGPAWPW 415
>UniRef50_Q0FX57 Cluster: Putative uncharacterized protein; n=1;
Roseovarius sp. HTCC2601|Rep: Putative uncharacterized
protein - Roseovarius sp. HTCC2601
Length = 140
Score = 33.1 bits (72), Expect = 7.0
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = -2
Query: 176 HAGGGTRGPRVHAVQDVVEPARHLRAVLLEPFDA----ECPYGSREAENLRVDPR 24
HAG P H + D E AR R LLEP +A + + + +A NLR PR
Sbjct: 80 HAGHDHHCPLCHGLPDAPESARAERQTLLEPHEAWQRRDDLHRAAQARNLRHSPR 134
>UniRef50_Q0FWJ6 Cluster: Putative uncharacterized protein; n=1;
Roseovarius sp. HTCC2601|Rep: Putative uncharacterized
protein - Roseovarius sp. HTCC2601
Length = 87
Score = 33.1 bits (72), Expect = 7.0
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = +1
Query: 7 PWPSVRRGSTRR--FSASREPYGHSASKGSRRT-ARRWRAGSTTS----CTACTRGPRVP 165
P ++R +T R S +R G +AS RR+ ARRWRA +TTS C P P
Sbjct: 9 PPRTIRSATTTRPRGSITRRLTGQTASTACRRSSARRWRASTTTSSGRRARWCASAPARP 68
Query: 166 PP 171
P
Sbjct: 69 SP 70
>UniRef50_Q69SF9 Cluster: Putative uncharacterized protein
OJ1112_E07.29; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1112_E07.29 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 33.1 bits (72), Expect = 7.0
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = +1
Query: 4 RPWPSVRRGSTRRFSASREPYGHSASKGSRRTARRWRAGSTTSCTACTR 150
RP P R +TR SA P GH G R R WR A R
Sbjct: 36 RPGPIGRAAATRLSSAQGRPTGHGDGDGPRARTRCWRRQPAAEAAAQRR 84
>UniRef50_A3BE28 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 398
Score = 33.1 bits (72), Expect = 7.0
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = +1
Query: 10 WPSVRRGSTRRFSASREPYGHSASKGSRRTARRWRAGSTTS 132
WP+V RG R S R P G GS T RW GS S
Sbjct: 54 WPTVARGKRSRSSRRRSPSG----SGSAATKGRWARGSPAS 90
>UniRef50_A2YFL5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 348
Score = 33.1 bits (72), Expect = 7.0
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = +1
Query: 10 WPSVRRGSTRRFSASREPYGHSASKGSRRTARRWRAGSTTS 132
WP+V RG R S R P G GS T RW GS S
Sbjct: 54 WPTVARGKRSRSSRRRSPSG----SGSAATKGRWARGSPAS 90
>UniRef50_UPI0000EBDD17 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 156
Score = 32.7 bits (71), Expect = 9.2
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 58 EPYGHSASKGSRRTARRWRAGSTTSCTACTRGP---RVPPPA 174
EP G ASKG+ R AR R + A TRGP RV PP+
Sbjct: 6 EPGGAGASKGNPRAARAGRRAPLGAVGAGTRGPHGSRVRPPS 47
>UniRef50_UPI0000E80618 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 248
Score = 32.7 bits (71), Expect = 9.2
Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +1
Query: 1 ARPWPSVRRG----STRRFSASREPYGHSASKGSRRTARRWRAGSTTSCTACTRGPRVPP 168
ARP V RG + R S+ P+ H A+ R A R AGST S A R PR P
Sbjct: 42 ARPGRLVVRGVLIFAFARNVISQGPFSHRAAP--RHEASRTGAGSTKSQHASRRRPRSPA 99
Query: 169 PAWP 180
P+ P
Sbjct: 100 PSKP 103
>UniRef50_Q4SWY2 Cluster: Chromosome 2 SCAF13355, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF13355, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 327
Score = 32.7 bits (71), Expect = 9.2
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Frame = +1
Query: 76 ASKGSR-RTARRWR-AGSTTSCTACTR---GPRVPPPAWP 180
A G R R++RRWR G ++C + TR G R P P+WP
Sbjct: 233 ADPGLRWRSSRRWRWLGCRSACPSSTRTAAGGRAPRPSWP 272
>UniRef50_Q9NFA7 Cluster: Putative uncharacterized protein L779.04;
n=2; Leishmania|Rep: Putative uncharacterized protein
L779.04 - Leishmania major
Length = 1125
Score = 32.7 bits (71), Expect = 9.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 70 HSASKGSRRTARRWRAGSTTSCTACTRGPRVPPPAWP 180
H G RR A+R R ++++ A P+VPPP++P
Sbjct: 97 HHRVGGGRREAQRRRLPASSASDAAMSKPKVPPPSFP 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,882,681
Number of Sequences: 1657284
Number of extensions: 12803328
Number of successful extensions: 40385
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 38460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40333
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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