Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30835
         (626 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358572-1|AAQ88935.1|  489|Homo sapiens EAPD458 protein.              33   1.1  

>AY358572-1|AAQ88935.1|  489|Homo sapiens EAPD458 protein.
          Length = 489

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
 Frame = +1

Query: 91  PNLHI*YLRPFTFWLAF*HYFMLLKKAEDGLIFGSVPYFMGFTQITSGISYCQSTII--- 261
           PNL + +L PF ++      F   +K   G ++ +V   M  T +  G+ +  S I+   
Sbjct: 120 PNLSLIFLMPFAYFFTESEGFAGSRKGVLGRVYETVVMLMLLTLLVLGMVWVASAIVDKN 179

Query: 262 SGIRRPLSYSWEPGCPYI*FCCIPHL 339
              R  L   WE   PY+ + CI  L
Sbjct: 180 KANRESLYDFWEYYLPYL-YSCISFL 204


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,520,084
Number of Sequences: 237096
Number of extensions: 2290322
Number of successful extensions: 8026
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 7903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8026
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)