Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30835
         (626 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   1.1  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    24   1.4  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   2.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.3  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.6  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   7.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.8  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -1

Query: 359 CIRCVVYKCGIQQNYM*GQPGSQEYDRGLRMPEIIVLW 246
           C +C  Y+   ++  +    G Q+Y R L +P+I + W
Sbjct: 150 CDKCSTYQSNGEEVCLENCTGYQQYLRLLEVPQINLEW 187


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 343 YINAGYNKIICRGNRAPRNMIGVCECQ 263
           Y   G + +IC  N   + +IGV ECQ
Sbjct: 4   YHIVGASVLICLLNETAKAIIGVDECQ 30


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = -2

Query: 457 NLTATMS*GMSISTVTKP-TAKG 392
           +L+  +S G+SIS  TKP T+KG
Sbjct: 537 SLSENLSSGLSISDSTKPETSKG 559



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 230 EVICVNPMKYGTEPKIRPSSAFFKSMK*C 144
           E I V+P + G E K +P+S    +++ C
Sbjct: 161 EEIRVDPFRTGFEHKRQPTSIDLNAVRLC 189


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 305 QPGSQEYDRGLRMPEIIVLWQYEMPEVI 222
           +PGS +  R   + E  ++ Q+E P VI
Sbjct: 670 KPGSADKARNDFLTEASIMGQFEHPNVI 697


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 355 YAAWYINAGYN 323
           Y+ WY+N  YN
Sbjct: 205 YSGWYLNHDYN 215


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 355 YAAWYINAGYN 323
           Y+ WY+N  YN
Sbjct: 205 YSGWYLNHDYN 215


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 230 EVICVNPMKYGTEPKIRPSSAFFKSMK*C 144
           E I V+P + G E K +P+S    +++ C
Sbjct: 161 EEIRVDPFRTGFEHKRQPTSIDLNAVRLC 189


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 416  SNQAHRERLRVTWKIQL*DCIR 351
            SNQ   + L V   +Q  DCIR
Sbjct: 1631 SNQCEGDSLNVAKSLQDHDCIR 1652


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,633
Number of Sequences: 438
Number of extensions: 4532
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)