Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30832
         (619 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr...    33   0.22 
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch...    33   0.22 
U41549-3|AAA83283.2|  245|Caenorhabditis elegans Hypothetical pr...    31   0.87 
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr...    28   4.6  
L11247-4|AAK84520.1|  392|Caenorhabditis elegans Hypothetical pr...    28   4.6  
AF016424-2|AAB65332.1|  720|Caenorhabditis elegans Peroxisome as...    28   4.6  
AB012224-1|BAA76440.1|  720|Caenorhabditis elegans Pex6p homolog...    28   4.6  
AB010968-1|BAA33544.1|  720|Caenorhabditis elegans PEX6 protein.       28   4.6  
Z69383-2|CAA93408.2|  318|Caenorhabditis elegans Hypothetical pr...    28   6.1  
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
            K12F2.1 protein.
          Length = 1969

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +3

Query: 57   SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYR-DLQKAGKELNSDQKVAVAKY 233
            +E   S EDK   + +I   +E ++  LE+   +    R D++KA +++  D KVA    
Sbjct: 1020 NEDLQSEEDKVNHLEKIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQENI 1079

Query: 234  DEVAQ 248
            DE+ +
Sbjct: 1080 DEITK 1084


>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
            protein.
          Length = 1969

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +3

Query: 57   SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYR-DLQKAGKELNSDQKVAVAKY 233
            +E   S EDK   + +I   +E ++  LE+   +    R D++KA +++  D KVA    
Sbjct: 1020 NEDLQSEEDKVNHLEKIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQENI 1079

Query: 234  DEVAQ 248
            DE+ +
Sbjct: 1080 DEITK 1084


>U41549-3|AAA83283.2|  245|Caenorhabditis elegans Hypothetical
           protein F22F1.3 protein.
          Length = 245

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 15/23 (65%), Positives = 16/23 (69%)
 Frame = +1

Query: 40  QLLMQNLKSRPLRRIRIHQFDKL 108
           +LL  N KSR  RRIRIH  DKL
Sbjct: 127 RLLKPNAKSRITRRIRIHVIDKL 149


>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
           protein F59A2.6 protein.
          Length = 1133

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 19/78 (24%), Positives = 38/78 (48%)
 Frame = +3

Query: 48  NAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVA 227
           NAK +     E+K T I++    ++   + ++  K +L   +   ++ +EL S QK    
Sbjct: 367 NAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQK--AD 424

Query: 228 KYDEVAQTLEFARDLSKQ 281
           K  E+ + L+ A+  S +
Sbjct: 425 KIQELEKELQNAQKRSSE 442


>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
           protein F59A2.6 protein.
          Length = 1133

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 19/78 (24%), Positives = 38/78 (48%)
 Frame = +3

Query: 48  NAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVA 227
           NAK +     E+K T I++    ++   + ++  K +L   +   ++ +EL S QK    
Sbjct: 367 NAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQK--AD 424

Query: 228 KYDEVAQTLEFARDLSKQ 281
           K  E+ + L+ A+  S +
Sbjct: 425 KIQELEKELQNAQKRSSE 442


>L11247-4|AAK84520.1|  392|Caenorhabditis elegans Hypothetical
           protein F09G8.3 protein.
          Length = 392

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/52 (25%), Positives = 28/52 (53%)
 Frame = +3

Query: 39  SAANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGK 194
           S+    S  PAS+ D DT +R+I   +E  +++ ++  + +  +R   + G+
Sbjct: 9   SSRAMSSASPASASDSDTSVRKIGKALETYLKHSQQHVAMMEKHRAEFETGR 60


>AF016424-2|AAB65332.1|  720|Caenorhabditis elegans Peroxisome
           assembly factor protein6 protein.
          Length = 720

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
 Frame = -1

Query: 499 SSKIFKSSSVNLAAPFVPFM-KSVLASALPICI--------RQSRISKTSFILLVSAA*R 347
           S+ ++++S+V+ + PF  F+ K+ L S++   +         Q  ISK + +LLV+ A  
Sbjct: 209 STAVYETSAVSQSLPFSNFLLKNSLTSSMRTTVFRMTQIYSAQKTISKKALVLLVTGASG 268

Query: 346 TQASFLACFFASRSEEIAIAVTCFERSLANS 254
           +    ++  FAS +      V  +E    N+
Sbjct: 269 SGKRLMSRVFASETHRNFFEVDGYEMVCENA 299


>AB012224-1|BAA76440.1|  720|Caenorhabditis elegans Pex6p homolog
           protein.
          Length = 720

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
 Frame = -1

Query: 499 SSKIFKSSSVNLAAPFVPFM-KSVLASALPICI--------RQSRISKTSFILLVSAA*R 347
           S+ ++++S+V+ + PF  F+ K+ L S++   +         Q  ISK + +LLV+ A  
Sbjct: 209 STAVYETSAVSQSLPFSNFLLKNSLTSSMRTTVFRMTQIYSAQKTISKKALVLLVTGASG 268

Query: 346 TQASFLACFFASRSEEIAIAVTCFERSLANS 254
           +    ++  FAS +      V  +E    N+
Sbjct: 269 SGKRLMSRVFASETHRNFFEVDGYEMVCENA 299


>AB010968-1|BAA33544.1|  720|Caenorhabditis elegans PEX6 protein.
          Length = 720

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
 Frame = -1

Query: 499 SSKIFKSSSVNLAAPFVPFM-KSVLASALPICI--------RQSRISKTSFILLVSAA*R 347
           S+ ++++S+V+ + PF  F+ K+ L S++   +         Q  ISK + +LLV+ A  
Sbjct: 209 STAVYETSAVSQSLPFSNFLLKNSLTSSMRTTVFRMTQIYSAQKTISKKALVLLVTGASG 268

Query: 346 TQASFLACFFASRSEEIAIAVTCFERSLANS 254
           +    ++  FAS +      V  +E    N+
Sbjct: 269 SGKRLMSRVFASETHRNFFEVDGYEMVCENA 299


>Z69383-2|CAA93408.2|  318|Caenorhabditis elegans Hypothetical
           protein F13E9.5 protein.
          Length = 318

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 480 DLKILDDLYPEVTPKHELNEEGQSGFHLQITRAAEHLYSIIDGKPK 617
           +LK  DD +P+   K E N E     H  +T   +  ++   GKP+
Sbjct: 38  NLKKFDDAFPKPNKKKEANMEFGELMHKYLTMRPDGRFATWHGKPQ 83


>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
           protein C50F2.2 protein.
          Length = 1029

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/61 (22%), Positives = 30/61 (49%)
 Frame = +3

Query: 33  MPSAANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQ 212
           +P     K E+    ED+   + +    +  K+++  KR+SK    R   ++ K++ S++
Sbjct: 163 LPELVEKKREEKRQQEDQKAVVLEKRKPVTQKVQDHLKRRSKSPIGRGKDQSDKDIISNK 222

Query: 213 K 215
           K
Sbjct: 223 K 223


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,674,323
Number of Sequences: 27780
Number of extensions: 227312
Number of successful extensions: 706
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)