Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30829
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.81 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.3  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.9  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
 Frame = -2

Query: 637 PISPPKHAPCEKPINPW-----KGPCSSTTNSINLKVSSKPTAGPPKHLPLNV-LSSELN 476
           P+  P H+P    I  +     K    S ++ +NL     P +G P + PL++ +SS   
Sbjct: 192 PVDAPMHSPPGDGILDFSKRGQKSDADSDSDVVNLSKPGTPPSGEPGNGPLDLSVSSRKR 251

Query: 475 HHERESSLP 449
            ++   S P
Sbjct: 252 SNDDSVSQP 260


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 356  EYGTVLPVTVKSQYF*LGLFSIHHV 282
            +YG +  VTV S Y  L ++S+ ++
Sbjct: 1003 KYGVIYYVTVPSMYLLLVIYSVFNM 1027


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 356  EYGTVLPVTVKSQYF*LGLFSIHHV 282
            +YG +  VTV S Y  L ++S+ ++
Sbjct: 1003 KYGVIYYVTVPSMYLLLVIYSVFNM 1027


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 634 ISPPKHAPCEKPINPW 587
           + PP HAP EK  + W
Sbjct: 124 VLPPHHAPEEKKRSFW 139


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 443 IIQDFMRGRNKS*LCVFSNSLPE 375
           ++ D  R RNK+  CVF   + E
Sbjct: 22  LLDDGTRTRNKAAECVFGKQVRE 44


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -2

Query: 313 FNLGCSVSIMFSDWLEFELCSDMARTNIEFLLITIRF 203
           F+  C V  +   W+  E C ++      +L+I I+F
Sbjct: 332 FSNACEVMAIV--WITSETCEEIVAGVTTYLVILIQF 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,611
Number of Sequences: 336
Number of extensions: 3622
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)