Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30829
         (713 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70680-1|CAA94571.1|  221|Caenorhabditis elegans Hypothetical pr...   100   9e-22
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ...    31   1.1  
AC024757-4|AAK68429.2|  371|Caenorhabditis elegans Methionine am...    29   4.4  
U23452-5|AAK31546.1|  304|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AL117200-14|CAJ85779.1|  465|Caenorhabditis elegans Hypothetical...    28   7.6  
AL117200-12|CAB60583.1|  461|Caenorhabditis elegans Hypothetical...    28   7.6  

>Z70680-1|CAA94571.1|  221|Caenorhabditis elegans Hypothetical
           protein C25G4.2 protein.
          Length = 221

 Score =  100 bits (240), Expect = 9e-22
 Identities = 52/115 (45%), Positives = 70/115 (60%), Gaps = 1/115 (0%)
 Frame = +3

Query: 294 TEQPKLKILAFHGYRQNGTVFRAKIGSFRKAVAKYAQLTFISAPHKVLNDGSGSEDSRSW 473
           + QPKL+IL  HGYRQ    FR K GS RK V   A+  F++  H V  D    + SR+W
Sbjct: 2   SSQPKLRILCLHGYRQCDQSFRQKTGSTRKLVKSLAEFEFVNGVHSVAVD-EHVDSSRAW 60

Query: 474 WF-NSEDNTFSGKCLGGPAVGFEETLRLIELVVEEHGPFHGFMGFSQGACLGGLI 635
           WF N+E  +FS +     AVGFEE++  +   +EE+GPF G +GFSQGA +  L+
Sbjct: 61  WFSNNEAMSFSSRESTEVAVGFEESVAAVVKFIEENGPFDGLLGFSQGASMVHLL 115


>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
            protein Y55F3BR.2 protein.
          Length = 1594

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -2

Query: 637  PISPPKHAPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLP 503
            P + PK+A  EKP  P     S+T  +I +   SKP   P +H P
Sbjct: 1400 PKNSPKNAT-EKPTEPPTTQASTTVGAIIVTKKSKPIKVPAQHCP 1443


>AC024757-4|AAK68429.2|  371|Caenorhabditis elegans Methionine
           aminopeptidase protein 1 protein.
          Length = 371

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -2

Query: 652 FVAWPPISPPKHAPCEKPINPWKGPCSSTTNSINL-KVSSKPTAGPPKHLP 503
           F A+ PI    H+    P NPW  PC S T S+   +V+ +     P H+P
Sbjct: 39  FKAFWPIHKFSHSDVNGPYNPW--PCYSFTGSLRPGRVTDRRPV--PDHIP 85


>U23452-5|AAK31546.1|  304|Caenorhabditis elegans Hypothetical
           protein R07G3.6 protein.
          Length = 304

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 25/74 (33%), Positives = 34/74 (45%)
 Frame = -2

Query: 655 LFVAWPPISPPKHAPCEKPINPWKGPCSSTTNSINLKVSSKPTAGPPKHLPLNVLSSELN 476
           +F   PP  PP     EKPI     P   T N + +K+ + P+  PP+ L       E N
Sbjct: 207 IFTVPPP--PPLFQEWEKPILSLSNPF--TLNPL-MKMFTTPS--PPQTLAPLPKIPEPN 259

Query: 475 HHERESSLPLPSFK 434
            +E +  LP P FK
Sbjct: 260 PYEIKKGLPEPQFK 273


>AL117200-14|CAJ85779.1|  465|Caenorhabditis elegans Hypothetical
           protein Y50E8A.4c protein.
          Length = 465

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 11/75 (14%)
 Frame = -2

Query: 640 PPISPPKHAPCEKPINPWKG---PCSSTTNSINLKVSSK-PT-AGPPKHLPLNVLSS--- 485
           PP  PP   P      P        SS T+SIN   +SK PT A P    P+  LS    
Sbjct: 12  PPHQPPPPVPHHHQNQPTHNNTTTISSATSSINTTTTSKKPTIAAPTAPSPIKSLSDHTG 71

Query: 484 ---ELNHHERESSLP 449
              +LN H    SLP
Sbjct: 72  RLMQLNGHVGFDSLP 86


>AL117200-12|CAB60583.1|  461|Caenorhabditis elegans Hypothetical
           protein Y50E8A.4b protein.
          Length = 461

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 11/75 (14%)
 Frame = -2

Query: 640 PPISPPKHAPCEKPINPWKG---PCSSTTNSINLKVSSK-PT-AGPPKHLPLNVLSS--- 485
           PP  PP   P      P        SS T+SIN   +SK PT A P    P+  LS    
Sbjct: 12  PPHQPPPPVPHHHQNQPTHNNTTTISSATSSINTTTTSKKPTIAAPTAPSPIKSLSDHTG 71

Query: 484 ---ELNHHERESSLP 449
              +LN H    SLP
Sbjct: 72  RLMQLNGHVGFDSLP 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,176,608
Number of Sequences: 27780
Number of extensions: 349903
Number of successful extensions: 1022
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)