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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30828
         (674 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac...   226   3e-60
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon...   226   3e-60
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma...   100   4e-22
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce...    89   5e-19
SPBC1198.03c |||sequence orphan|Schizosaccharomyces pombe|chr 2|...    34   0.016
SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc...    33   0.050
SPCC4B3.07 |||nuclear pore associated protein|Schizosaccharomyce...    29   0.61 
SPBC3B9.21 |dcp1||mRNA decapping complex subunit Dcp1|Schizosacc...    27   1.9  
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb...    27   2.5  
SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces p...    27   3.3  
SPBC839.07 |ibp1||itty bitty phosphatase Ibp1|Schizosaccharomyce...    26   5.7  
SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase |Schizosaccha...    26   5.7  
SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr 1|...    25   7.6  
SPCC1393.06c |||rRNA processing protein Ipi1|Schizosaccharomyces...    25   7.6  
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb...    25   7.6  
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr...    25   10.0 
SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1 re...    25   10.0 
SPBC13E7.02 |cwf24||GCN5-related N acetyltransferase|Schizosacch...    25   10.0 

>SPCP31B10.07 |eft202||translation elongation factor 2
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 842

 Score =  226 bits (552), Expect = 3e-60
 Identities = 104/187 (55%), Positives = 140/187 (74%), Gaps = 4/187 (2%)
 Frame = +3

Query: 48  YQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 227
           YQ F R+VE+VNV+I+TY D    +G+ +V P KG+V F SGLHGWAFT++QF+  YA K
Sbjct: 175 YQNFARVVESVNVVISTYYDK--VLGDCQVFPDKGTVAFASGLHGWAFTVRQFANRYAKK 232

Query: 228 FKIDLVKLMNRLWGENFFNPQTKKWSKQKDD----DNKRSFCMYVLDPIYKVFDAIMKFK 395
           F ID  K+M RLWGEN+FNP+TKKWSK   D     N+R+F M++LDPIY++FDA+M  +
Sbjct: 233 FGIDRNKMMQRLWGENYFNPKTKKWSKSATDANGNSNQRAFNMFILDPIYRIFDAVMNSR 292

Query: 396 KEEIDDLLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYR 575
           K+E+  LL K+ VTIK ++ + +GKALLKVVMR +LPA +AL++MI +HLPSP  AQ+YR
Sbjct: 293 KDEVFTLLSKLEVTIKPDEKELEGKALLKVVMRKFLPAADALMEMIVLHLPSPKTAQQYR 352

Query: 576 MGDVIRG 596
              +  G
Sbjct: 353 AETLYEG 359



 Score = 53.6 bits (123), Expect = 2e-08
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = +1

Query: 580 EMLYEGPHDDEAAIGIKSCDPEAPLMMYVSK 672
           E LYEGP DDE A+GI++CD  APLM+YVSK
Sbjct: 354 ETLYEGPMDDECAVGIRNCDANAPLMIYVSK 384


>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
           elongation factor 2 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 842

 Score =  226 bits (552), Expect = 3e-60
 Identities = 104/187 (55%), Positives = 140/187 (74%), Gaps = 4/187 (2%)
 Frame = +3

Query: 48  YQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 227
           YQ F R+VE+VNV+I+TY D    +G+ +V P KG+V F SGLHGWAFT++QF+  YA K
Sbjct: 175 YQNFARVVESVNVVISTYYDK--VLGDCQVFPDKGTVAFASGLHGWAFTVRQFANRYAKK 232

Query: 228 FKIDLVKLMNRLWGENFFNPQTKKWSKQKDD----DNKRSFCMYVLDPIYKVFDAIMKFK 395
           F ID  K+M RLWGEN+FNP+TKKWSK   D     N+R+F M++LDPIY++FDA+M  +
Sbjct: 233 FGIDRNKMMQRLWGENYFNPKTKKWSKSATDANGNSNQRAFNMFILDPIYRIFDAVMNSR 292

Query: 396 KEEIDDLLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYR 575
           K+E+  LL K+ VTIK ++ + +GKALLKVVMR +LPA +AL++MI +HLPSP  AQ+YR
Sbjct: 293 KDEVFTLLSKLEVTIKPDEKELEGKALLKVVMRKFLPAADALMEMIVLHLPSPKTAQQYR 352

Query: 576 MGDVIRG 596
              +  G
Sbjct: 353 AETLYEG 359



 Score = 53.6 bits (123), Expect = 2e-08
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = +1

Query: 580 EMLYEGPHDDEAAIGIKSCDPEAPLMMYVSK 672
           E LYEGP DDE A+GI++CD  APLM+YVSK
Sbjct: 354 ETLYEGPMDDECAVGIRNCDANAPLMIYVSK 384


>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1000

 Score = 99.5 bits (237), Expect = 4e-22
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 15/215 (6%)
 Frame = +3

Query: 3   MDRXXXXXXXXXXXXYQTFQRIVENVNVIIATY----------NDDGGPMGEVRVDPSKG 152
           MDR            +    R+VE VN +I T+          ND+      +   P +G
Sbjct: 156 MDRLITELKLSPIEAHYHLLRLVEQVNAVIGTFYTGELMQLADNDEVISDEGIYFAPEQG 215

Query: 153 SVGFGSGLHGWAFTLKQFSEMYADKFKIDLVKLMNRLWGENFFNPQTKKWSKQKDDDNKR 332
           +V F S   GWAF L QFSE Y  K  +    L   LWG+ + +P+TK+  + K    +R
Sbjct: 216 NVVFASAYDGWAFCLDQFSEFYEKKLGLKQKALTKCLWGDYYLDPKTKRVLQPKHLQGRR 275

Query: 333 ---SFCMYVLDPIYKVFD-AIMKFKKEEIDDLLKKIGVTIKHED-SDKDGKALLKVVMRS 497
               F  +VL+ ++ V++ A+     E I+ ++K + + +   D   KD + LL  + + 
Sbjct: 276 LKPMFVQFVLENLWAVYESAVSNRNLENIEKIIKALNIKVLPRDIKSKDPRNLLLAIFQQ 335

Query: 498 WLPAGEALLQMIAIHLPSPVVAQKYRMGDVIRGTP 602
           WLP   A+L      +PSP+ AQ  R   V+  TP
Sbjct: 336 WLPLSTAILLTAIREIPSPINAQANRARKVLSSTP 370


>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 983

 Score = 89.0 bits (211), Expect = 5e-19
 Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 2/171 (1%)
 Frame = +3

Query: 48  YQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 227
           Y   + +++ VN  I   + D     + RV P  G+V F S   G+ FTL  F+++Y D+
Sbjct: 286 YHKLRHVIDEVNDNICQISKDL----KYRVSPELGNVCFASCDLGYCFTLSSFAKLYIDR 341

Query: 228 FK-IDLVKLMNRLWGENFFNPQTKKWSKQK-DDDNKRSFCMYVLDPIYKVFDAIMKFKKE 401
              ID+     RLWG+ +F+ +T+K++KQ  D    RSF  ++L+P+YK+    +  + E
Sbjct: 342 HGGIDVDLFSKRLWGDIYFDSKTRKFAKQSLDGSGVRSFVHFILEPLYKLHTLTISDEAE 401

Query: 402 EIDDLLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSP 554
           ++   L    + +K +D   D K LL+++  S+       +  +  H+PSP
Sbjct: 402 KLKKHLSSFQIYLKPKDYLLDPKPLLQLICASFFGFPVGFVNAVTRHIPSP 452


>SPBC1198.03c |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 249

 Score = 34.3 bits (75), Expect = 0.016
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 186 AFTLKQFSEMYADKFKIDLVKLMNRLWGENFFNPQ 290
           A+ +  + E Y DK K  ++K    +W   FFNP+
Sbjct: 153 AYVISYYVEKYVDKAKFPIIKGFIEMWNRKFFNPR 187


>SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit
           Apc1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1458

 Score = 32.7 bits (71), Expect = 0.050
 Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = +3

Query: 189 FTLKQFS-EMYADKFKIDLVKLMNRLWGENFFNPQTKKWSKQKDD 320
           FT+ + + E Y+  ++ + ++L+NRL  ++F +P+T KW   K D
Sbjct: 620 FTVLEIAAEEYSPNWESEELRLVNRLDVDSFLHPKTPKWVFNKQD 664


>SPCC4B3.07 |||nuclear pore associated protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 393

 Score = 29.1 bits (62), Expect = 0.61
 Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
 Frame = +3

Query: 195 LKQFSEMYADKFKIDLVKLMNRLWGENFFNPQTKKWSK----QKDDDNKRSFCMYVLDPI 362
           L QF + +++ F +D+  ++  LW ++  +P T  + K    +   +N  +F  Y +D  
Sbjct: 242 LFQFGDQFSEAFLLDVCSIITALWLKSVVDPNTPAYYKLIAQEAVLNNYTTFAEYYMD-- 299

Query: 363 YKVFDAIMKFKKEEIDDLLKK 425
                 ++   +  +DDL+ K
Sbjct: 300 ------LLDNSESNVDDLINK 314


>SPBC3B9.21 |dcp1||mRNA decapping complex subunit
           Dcp1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 127

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 434 DSNLLKEIINLLFLKFH-DGIEHLVDRIQNV 345
           D N+L+  +NL  LKFH   IE ++D   +V
Sbjct: 3   DENILRNAVNLQVLKFHYPEIESIIDIASHV 33


>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 775

 Score = 27.1 bits (57), Expect = 2.5
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +3

Query: 270 ENFFNPQTKKWSKQKDDDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGVTIK-- 443
           +++ +   K  +K+K   NK++    +LDPI       ++    EI  L K +G+  K  
Sbjct: 72  DDYLDAHRKSSTKKKSSQNKQAKESKLLDPIAFQHKIALEEDDREIAHLEKMLGIKSKDK 131

Query: 444 --HEDSDKDGKALLK 482
             H   DK+   LL+
Sbjct: 132 SAHSKIDKEFGWLLE 146


>SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1272

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
 Frame = -2

Query: 466 PSLSESSCLIVTPIFLRRSSISSFLNFMMASNTL*IGSKTYMQNERLLSSSFCFDHFFV* 287
           P +S S C+    +F+  S   S  +F+M S  L + S+ Y   + +   S+C  +  + 
Sbjct: 417 PFISSSLCISPRYMFVVNSETVSVGSFLMVSEQLQMLSERYGFFDSIKFGSYCVSNLSIF 476

Query: 286 G---LKKFSPHNLFISLTRSIL 230
               L+K S  NL ++L   +L
Sbjct: 477 PKLLLEKTSVINLIMALYVKLL 498


>SPBC839.07 |ibp1||itty bitty phosphatase Ibp1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 138

 Score = 25.8 bits (54), Expect = 5.7
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -1

Query: 200 FEGESPPMKTRPETNRALARVDTH---LTHGTTIIVICGYNDV 81
           +EGE  P   R  ++  LA VD H   L    ++IV C Y+ V
Sbjct: 33  YEGERIPGSVRIPSDTFLASVDQHVDDLMKKRSLIVHCTYSQV 75


>SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 547

 Score = 25.8 bits (54), Expect = 5.7
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +3

Query: 363 YKVFDAIMKFKKEEIDDLLKKIGVTIKHE---DSDKDGKALLKVVMR 494
           Y+V +  + F+K+ +D ++K      + E   +S K G+ ++ VV R
Sbjct: 350 YEVIEISIPFQKDMLDTVVKVFSADARFEINNESQKTGEPVVSVVKR 396


>SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1018

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 9/28 (32%), Positives = 20/28 (71%)
 Frame = -1

Query: 257 VHKLDKVNLEFVSIHLRELFEGESPPMK 174
           +H ++K+N+E +++ +  +F  ESP +K
Sbjct: 716 LHFIEKLNIELLNLLINVVFVTESPGVK 743


>SPCC1393.06c |||rRNA processing protein Ipi1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 408

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 425 LLKEIINLLFLKFHDGIEHLVDRIQNVHAK 336
           LL+  I ++FL  H G+ H+   I+N   K
Sbjct: 133 LLEPNIGMIFLYTHSGMTHITPSIRNDSTK 162


>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
           membrane proteins, ESCRT 0 complex|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 610

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 224 VSIHLRELFEGESPPMKTRPETNRALARVDTHLT 123
           + + L+E+ +   PP   RP     +   D HLT
Sbjct: 269 IELSLKEMPQSREPPSYERPSEANVVISQDQHLT 302


>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
           protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 455

 Score = 25.0 bits (52), Expect = 10.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 270 ENFFNPQTKKWSKQKDDDNKRS 335
           E+  N   +KWSK +DDD   S
Sbjct: 432 ESILNKINQKWSKVQDDDGMPS 453


>SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1
           related|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 773

 Score = 25.0 bits (52), Expect = 10.0
 Identities = 9/34 (26%), Positives = 21/34 (61%)
 Frame = +3

Query: 222 DKFKIDLVKLMNRLWGENFFNPQTKKWSKQKDDD 323
           +KF+ +++  +N ++GEN F+    ++    D+D
Sbjct: 220 EKFEKNILASVNAVFGENLFDENDWEYKSVYDED 253


>SPBC13E7.02 |cwf24||GCN5-related N
           acetyltransferase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 533

 Score = 25.0 bits (52), Expect = 10.0
 Identities = 10/34 (29%), Positives = 22/34 (64%)
 Frame = -2

Query: 487 TTFSKALPSLSESSCLIVTPIFLRRSSISSFLNF 386
           T+  + +PSL ++S  I++  F+R  + S+ ++F
Sbjct: 359 TSAQQKMPSLGDNSNTIISKYFIREITESNIVHF 392


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,982,609
Number of Sequences: 5004
Number of extensions: 64657
Number of successful extensions: 208
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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