Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30828
(674 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 202 2e-52
02_04_0017 + 18937774-18937864,18938505-18940945 200 1e-51
01_06_0662 + 30987187-30987277,30987825-30990214 197 6e-51
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 188 4e-48
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 143 1e-34
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 99 4e-21
03_05_0511 + 25056018-25059107 88 7e-18
02_04_0148 - 20198407-20201424 47 1e-05
05_02_0127 - 6872780-6872835,6872943-6873026,6873501-6873784,687... 30 1.9
04_04_0378 - 24822436-24822521,24822623-24822738,24823010-248230... 29 2.6
02_03_0190 + 16188329-16188514,16188552-16188885,16190275-161907... 29 2.6
01_07_0331 + 42804385-42804659,42806175-42806340,42806424-428065... 29 2.6
01_01_1159 + 9224331-9224473,9224586-9224727,9225412-9225483,922... 29 2.6
12_01_0275 - 2009525-2010097,2010274-2010308,2010932-2011076 28 7.8
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 202 bits (493), Expect = 2e-52
Identities = 95/200 (47%), Positives = 133/200 (66%), Gaps = 2/200 (1%)
Frame = +3
Query: 3 MDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHG 182
MDR YQTF R++EN NVI+ATY D +G+V+V P KG+V F +GLHG
Sbjct: 160 MDRCFLELQVEGEEAYQTFSRVIENANVIMATYEDT--LLGDVQVYPEKGTVAFSAGLHG 217
Query: 183 WAFTLKQFSEMYADKFKIDLVKLMNRLWGENFFNPQTKKWSKQKDDDN--KRSFCMYVLD 356
WAFTL F++MYA KF +D K+M RLWGENFF+P TKKW+ + KR F + +
Sbjct: 218 WAFTLSSFAKMYASKFGVDESKMMERLWGENFFDPATKKWTNKSTGSATCKRGFVQFCYE 277
Query: 357 PIYKVFDAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIA 536
PI ++ + M +K+++ +L+K+GV +K ++ D GKAL+K VM++WLPA ALL+M+
Sbjct: 278 PIKQIINTCMNDQKDKLWPMLQKLGVVMKADEKDLMGKALMKRVMQTWLPASNALLEMMI 337
Query: 537 IHLPSPVVAQKYRMGDVIRG 596
HLPSP AQKYR+ ++ G
Sbjct: 338 YHLPSPSKAQKYRVENLYEG 357
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +1
Query: 580 EMLYEGPHDDEAAIGIKSCDPEAPLMMYVSK 672
E LYEGP DD A I++CDPE PLM+YVSK
Sbjct: 352 ENLYEGPLDDVYATAIRNCDPEGPLMLYVSK 382
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 200 bits (487), Expect = 1e-51
Identities = 93/200 (46%), Positives = 133/200 (66%), Gaps = 2/200 (1%)
Frame = +3
Query: 3 MDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHG 182
MDR YQTF R++EN NVI+ATY D +G+V+V P KG+V F +GLHG
Sbjct: 160 MDRCFLELQVEGEEAYQTFSRVIENANVIMATYEDT--LLGDVQVYPEKGTVAFSAGLHG 217
Query: 183 WAFTLKQFSEMYADKFKIDLVKLMNRLWGENFFNPQTKKWSKQKDDDN--KRSFCMYVLD 356
WAFTL F++MYA KF +D K+M RLWGENFF+P TKKW+ + KR F + +
Sbjct: 218 WAFTLSSFAKMYASKFGVDEFKMMERLWGENFFDPATKKWTNKNTGSATCKRGFVQFCYE 277
Query: 357 PIYKVFDAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIA 536
PI ++ + M +K+++ +L+K+GV +K ++ + GKAL+K VM++WLPA ALL+M+
Sbjct: 278 PIKQIINTCMNDQKDKLWPMLQKLGVVMKADEKELMGKALMKRVMQTWLPASNALLEMMI 337
Query: 537 IHLPSPVVAQKYRMGDVIRG 596
HLPSP AQ+YR+ ++ G
Sbjct: 338 YHLPSPSKAQRYRVENLYEG 357
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +1
Query: 580 EMLYEGPHDDEAAIGIKSCDPEAPLMMYVSK 672
E LYEGP DD A I++CDPE PLM+YVSK
Sbjct: 352 ENLYEGPLDDVYATAIRNCDPEGPLMLYVSK 382
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 197 bits (481), Expect = 6e-51
Identities = 96/200 (48%), Positives = 133/200 (66%), Gaps = 2/200 (1%)
Frame = +3
Query: 3 MDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHG 182
MDR YQTF R++EN NVI+ATY D +G+V+V P KG+V F +GLHG
Sbjct: 160 MDRCFLELQVGGEEAYQTFSRVIENANVIMATYED--ALLGDVQVYPEKGTVAFSAGLHG 217
Query: 183 WAFTLKQFSEMYADKFKIDLVKLMNRLWGENFFNPQTKKWS-KQKDDDN-KRSFCMYVLD 356
WAFTL F++MYA KF +D K+M RLWGEN+F+P TKKW+ K D KR F + +
Sbjct: 218 WAFTLSNFAKMYASKFGVDESKMMERLWGENYFDPTTKKWTIKHTGSDTCKRGFIQFCYE 277
Query: 357 PIYKVFDAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIA 536
PI ++ + M +K+++ +L+K+GVT+K D GKAL+K VM++WLPA ALL+M+
Sbjct: 278 PIRQIINTCMNDQKDKLLPMLQKLGVTMK----DLTGKALMKRVMQTWLPASNALLEMMI 333
Query: 537 IHLPSPVVAQKYRMGDVIRG 596
HLPSP AQ+YR+ ++ G
Sbjct: 334 YHLPSPAKAQRYRVENLYEG 353
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +1
Query: 580 EMLYEGPHDDEAAIGIKSCDPEAPLMMYVSK 672
E LYEGP DD A I++CDPE PLM+YVSK
Sbjct: 348 ENLYEGPLDDIYASAIRNCDPEGPLMLYVSK 378
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 188 bits (458), Expect = 4e-48
Identities = 89/202 (44%), Positives = 125/202 (61%), Gaps = 4/202 (1%)
Frame = +3
Query: 3 MDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHG 182
MDR YQ F R++E+VNV +A Y D +G+ V P KG+V F +GLHG
Sbjct: 160 MDRCFLELQQSGEEAYQAFSRVIESVNVTMAPYEDKN--LGDCMVAPEKGTVAFSAGLHG 217
Query: 183 WAFTLKQFSEMYADKFKIDLVKLMNRLWGENFFNPQTKKWSKQKDDDN----KRSFCMYV 350
WAFTL F++MY KFK+D K+M RLWGEN+F+ TKKW+ + +R F +
Sbjct: 218 WAFTLSNFAKMYKAKFKVDEAKMMERLWGENYFDHTTKKWTTTAPSTSSKTCQRGFVQFC 277
Query: 351 LDPIYKVFDAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQM 530
+PI ++ A M KE + D+L K+ +T+K E+ + GK L+K VM++WLPA +ALL+M
Sbjct: 278 YEPIRRIISACMNDDKENLWDMLTKLKITLKAEEKELTGKKLMKRVMQAWLPASDALLEM 337
Query: 531 IAIHLPSPVVAQKYRMGDVIRG 596
I HLPSP AQ+YR+ + G
Sbjct: 338 IVFHLPSPAKAQQYRVDTLYDG 359
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 580 EMLYEGPHDDEAAIGIKSCDPEAPLMMYVSK 672
+ LY+GP DD A I++CDP+ PLM+YVSK
Sbjct: 354 DTLYDGPLDDPYATAIRNCDPKGPLMVYVSK 384
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 143 bits (347), Expect = 1e-34
Identities = 70/181 (38%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Frame = +3
Query: 48 YQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 227
YQT ++++VN ++++ D +V P+KG+V F SGLHGWA + F++MY+ K
Sbjct: 361 YQTLSSLIDSVNATMSSHKD-------AQVYPTKGTVVFSSGLHGWAVAISNFAKMYSSK 413
Query: 228 FKIDLVKLMNRLWGENFFNPQTKKWSKQKDDDN--KRSFCMYVLDPIYKVFDAIMKFKKE 401
FK++ K+++RLWGENFF+ TKKW+K+ KR F + +PI ++ +A M K
Sbjct: 414 FKVEESKMIDRLWGENFFDLATKKWTKKNTGTATCKRGFVQFCYEPIREIMNACMN-SKH 472
Query: 402 EIDDLLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMG 581
++ +L+KI VT+ + G L+K V+++WLPA AL +M+ H+PSP AQ++ +G
Sbjct: 473 KLWPMLEKIHVTVSSPAKELVGIELVKYVIQAWLPACSALSEMMMYHIPSPEKAQRHCVG 532
Query: 582 D 584
+
Sbjct: 533 N 533
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +1
Query: 625 IKSCDPEAPLMMYVSK 672
+++CD E PL++YVSK
Sbjct: 546 VRNCDAEGPLVLYVSK 561
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 98.7 bits (235), Expect = 4e-21
Identities = 51/171 (29%), Positives = 94/171 (54%), Gaps = 3/171 (1%)
Frame = +3
Query: 48 YQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYAD- 224
Y + +E +N +I++ + G G VDP+ G+V F SG GW+FTL+ F+ +Y
Sbjct: 296 YFKLRHTLEAINDLISSCSTTVG--GTQLVDPAAGNVCFASGSAGWSFTLQSFAHLYLKI 353
Query: 225 -KFKIDLVKLMNRLWGENFFNPQTKKWSKQKDDDN-KRSFCMYVLDPIYKVFDAIMKFKK 398
+ D K +RLWG+ +++P T+ + K+ + RSF +VL+P+YK++ ++ K
Sbjct: 354 HGIQFDHEKFASRLWGDLYYHPDTRTFKKKPPKEGANRSFVEFVLEPLYKIYSQVVGESK 413
Query: 399 EEIDDLLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPS 551
+++ L ++GVT+ + + + LL++ RS M+ H+PS
Sbjct: 414 GKVEATLSELGVTLSNAAYKLNVRPLLRLACRSIFGTSTGFTDMLVKHIPS 464
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 562 PRNIVWEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSK 672
PR I E +Y GP D +K CDP APLM+ V+K
Sbjct: 470 PRKI--EHIYTGPQDSTIVDAMKKCDPHAPLMVNVTK 504
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 87.8 bits (208), Expect = 7e-18
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 5/151 (3%)
Frame = +3
Query: 141 PSKGSVGFGSGLHGWAFTLKQFSEMYADKF-KIDLVKLMNRLWGENFFNPQTKKWSKQKD 317
P KG+V F L GW F + QF+E YA K I+ L+ LWG +F+ + K +K
Sbjct: 210 PQKGNVVFACALDGWGFRIHQFAEFYAAKLPNINANALLKGLWGPRYFHKKKKMIVGKKG 269
Query: 318 ---DDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGVTIKHED-SDKDGKALLKV 485
D + F +VL P+++ + ++ E + ++ + ++ + +KD K +L+
Sbjct: 270 MEGGDAQPMFVEFVLKPLWQAYQGVLSENGELVKKVITNFSLQVQQRELQNKDPKVVLQA 329
Query: 486 VMRSWLPAGEALLQMIAIHLPSPVVAQKYRM 578
VM WLP +A++ M+ P PV AQ R+
Sbjct: 330 VMSRWLPLADAVMTMVVECTPDPVAAQGVRV 360
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Frame = +3
Query: 102 NDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADKFKIDLVKLMNRLWGENFF 281
N D E P G+V F GW F L +++ A K + D +L+ LWG+ +F
Sbjct: 203 NGDAADEEEDAFQPQNGNVVFACAREGWGFRLVTLAKLLAPKLRADPAELLKGLWGQKYF 262
Query: 282 NPQTK-------KWSKQKDDDNKRSFCMYVLDPIY 365
+ +++ + + + K F YVL+P++
Sbjct: 263 DERSRTVVGKEAMAAATANPNPKPMFVKYVLEPLW 297
>05_02_0127 -
6872780-6872835,6872943-6873026,6873501-6873784,
6874403-6874568,6876724-6876906,6877400-6877505,
6877620-6877775,6878882-6878899
Length = 350
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 75 NVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADKFKI-DLVKL 251
+ + + AT+ DD G G +++ P+ G G W F+L S++ AD + DL L
Sbjct: 254 DASTVNATFGDDLGNGGPLQIGPNGGD-SSSLGQQIWDFSL---SDLSADLTNLGDLAAL 309
Query: 252 MNRLWGENFFNPQTKKWSKQKDDD 323
N + N F P + DDD
Sbjct: 310 EN--YSGNPFLPSDSDIFESPDDD 331
>04_04_0378 -
24822436-24822521,24822623-24822738,24823010-24823092,
24823772-24823918,24824004-24824051,24824153-24824353,
24824981-24825152,24825235-24825299,24825813-24825939,
24826436-24826528,24826608-24826696,24826804-24826950,
24827047-24827359,24827474-24828048
Length = 753
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 375 DAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGK 470
DA+++ ++EIDD+ +IG + DSD+DGK
Sbjct: 661 DAMLQKLEKEIDDVDARIGNRWQLLDSDRDGK 692
>02_03_0190 +
16188329-16188514,16188552-16188885,16190275-16190745,
16191055-16191249,16191519-16191643,16192082-16192142,
16192774-16193023,16193129-16193279,16193594-16193902
Length = 693
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 159 GFGSGLHGWAFTLKQFSEMYADKFKIDLVKL-MNRLWGENFF 281
G G+G+ W T+ ++ YA+K K D + N +GEN F
Sbjct: 191 GVGAGMLSWDSTVAAYAADYAEKRKSDCRNVHSNGPYGENLF 232
>01_07_0331 +
42804385-42804659,42806175-42806340,42806424-42806549,
42807142-42807207,42807645-42807698,42808843-42809019,
42809100-42809102
Length = 288
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 147 KGSVGFGSGLHGWAFTLK--QFSEMYADKFKIDLVKLMNRLWGENFFNPQTKKWSKQKD 317
K S+GF + W K SE+YA+ +D VKL+ LWG N+ P+ ++ D
Sbjct: 203 KDSIGF---IVHWDILSKYEDMSELYAES--LDRVKLLTNLWG-NYSIPKDNPYTDDSD 255
>01_01_1159 +
9224331-9224473,9224586-9224727,9225412-9225483,
9225853-9225933,9226031-9226144,9226770-9226826,
9227209-9227310,9227617-9227767,9227851-9227927,
9228721-9228828,9229684-9229754,9230546-9230687,
9230903-9231001,9231112-9231240,9231445-9231559,
9231786-9231853,9233410-9233523,9233587-9233703,
9234079-9234132,9234221-9234326,9235272-9235402,
9235489-9235557
Length = 753
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 375 DAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGKALLKVVM 491
D +K EEI +L+ +G+ +K ED +K+ K+V+
Sbjct: 573 DEAALYKNEEIQNLIVALGLGVKGEDFNKEALRYHKIVI 611
>12_01_0275 - 2009525-2010097,2010274-2010308,2010932-2011076
Length = 250
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = -3
Query: 648 GFRITALDTNGSFIIVGSLV*HLPYDISGPLQVMVNEWQSSEAELHQQATKSASQPSAKL 469
G R+ S + ++ H P SG ++ M NE++ S + + +Q + ++ +L
Sbjct: 21 GVRVDFCHVKMSMKHINTIRSHKPESSSGLMENMENEFRRSASLILKQDVQESASGQCEL 80
Query: 468 CHLCQNPHA 442
C L + H+
Sbjct: 81 CILMTDYHS 89
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,779,219
Number of Sequences: 37544
Number of extensions: 439736
Number of successful extensions: 1308
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1294
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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