Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30827
(691 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 209 6e-53
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 206 3e-52
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 196 3e-49
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 171 1e-41
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 167 3e-40
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 167 3e-40
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 165 1e-39
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 164 2e-39
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 162 6e-39
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 160 3e-38
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 153 4e-36
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 153 4e-36
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 151 2e-35
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 150 3e-35
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 149 6e-35
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 136 6e-31
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 136 6e-31
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 136 6e-31
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 134 1e-30
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 130 3e-29
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 129 7e-29
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 126 7e-28
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 123 4e-27
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 123 4e-27
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 123 4e-27
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 123 4e-27
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 122 1e-26
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 119 8e-26
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 118 1e-25
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 115 1e-24
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 110 4e-23
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 106 4e-22
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 99 9e-20
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 93 4e-18
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 91 2e-17
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 88 2e-16
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 87 3e-16
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 81 3e-14
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 79 1e-13
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 77 5e-13
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 71 3e-11
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 70 6e-11
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 69 8e-11
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 68 2e-10
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 68 3e-10
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 66 6e-10
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 66 1e-09
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 63 5e-09
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 63 5e-09
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 62 2e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 9e-08
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 59 9e-08
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 58 2e-07
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 58 3e-07
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 57 4e-07
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 57 4e-07
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 57 5e-07
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 56 6e-07
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 56 8e-07
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 56 1e-06
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 54 2e-06
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 54 2e-06
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 54 4e-06
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 53 6e-06
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 52 1e-05
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 51 3e-05
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 50 4e-05
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 50 5e-05
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 50 7e-05
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 49 9e-05
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 48 3e-04
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 48 3e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 47 4e-04
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 47 5e-04
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 45 0.002
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 44 0.003
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 44 0.004
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 44 0.004
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 44 0.004
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 44 0.005
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 43 0.006
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 43 0.008
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 42 0.011
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 42 0.014
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 42 0.019
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 42 0.019
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 41 0.033
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 41 0.033
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 41 0.033
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 40 0.043
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 40 0.043
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 40 0.076
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 39 0.10
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 39 0.13
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 37 0.40
UniRef50_Q22LV7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.93
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 35 1.6
UniRef50_Q4HP18 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 33 6.6
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 8.7
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 8.7
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 209 bits (510), Expect = 6e-53
Identities = 115/204 (56%), Positives = 134/204 (65%)
Frame = -1
Query: 622 KNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXX 443
K +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I +R
Sbjct: 15 KKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTA 74
Query: 442 XXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNL 263
I+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL
Sbjct: 75 PKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNL 134
Query: 262 ILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SSPINDPGFPN 83
+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S PI PG PN
Sbjct: 135 MLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSFPIKLPGCPN 193
Query: 82 SARIKSLKDVPIIPDQIPKIKYNV 11
SARIKSL DVP +P PK+KYNV
Sbjct: 194 SARIKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 206 bits (504), Expect = 3e-52
Identities = 116/207 (56%), Positives = 122/207 (58%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 11 DIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPI 70
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N LVPL+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLS
Sbjct: 71 MIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLS 130
Query: 363 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 542
SNIAH G SVDLAIFSLHLAGISS SFDQ+PLFV AVGITAF
Sbjct: 131 SNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAF 190
Query: 543 XXXXXXXXXAGAITILLTDRNLNTSFF 623
AGAIT+LLTDRNLNTSFF
Sbjct: 191 LLLLSLPVLAGAITMLLTDRNLNTSFF 217
Score = 55.6 bits (128), Expect = 1e-06
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FFDPAGGGDPILYQHLF FFGHP+
Sbjct: 216 FFDPAGGGDPILYQHLFWFFGHPK 239
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 196 bits (479), Expect = 3e-49
Identities = 106/181 (58%), Positives = 114/181 (62%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSIL 132
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSF
Sbjct: 133 GAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSF 192
Query: 621 F 623
F
Sbjct: 193 F 193
Score = 57.2 bits (132), Expect = 4e-07
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 192 FFDPAGGGDPILYQHLFWFFGHPE 215
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 171 bits (417), Expect = 1e-41
Identities = 100/207 (48%), Positives = 112/207 (54%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 15 DIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPI 74
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 75 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
Query: 363 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 542
N+AH G SVDLAIFSLHLAGISS S Q PLFV +V ITA
Sbjct: 135 GNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAV 194
Query: 543 XXXXXXXXXAGAITILLTDRNLNTSFF 623
A IT+LLTDRNLNT+FF
Sbjct: 195 LLLLSLPVLAAGITMLLTDRNLNTTFF 221
Score = 57.2 bits (132), Expect = 4e-07
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 220 FFDPAGGGDPILYQHLFWFFGHPE 243
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 167 bits (405), Expect = 3e-40
Identities = 96/207 (46%), Positives = 109/207 (52%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 3 DIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPI 62
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPPL+
Sbjct: 63 MIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLA 122
Query: 363 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 542
N+AH G SVDL IFSLHLAGISS S Q PLFV AV ITA
Sbjct: 123 GNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAV 182
Query: 543 XXXXXXXXXAGAITILLTDRNLNTSFF 623
A IT+LLTDRNLNT+FF
Sbjct: 183 LLLLSLPVLAAGITMLLTDRNLNTTFF 209
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 167 bits (405), Expect = 3e-40
Identities = 96/207 (46%), Positives = 109/207 (52%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 14 DIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPI 73
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 74 LIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLA 133
Query: 363 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 542
N+AH G SVDL IFSLHLAG+SS S Q PLFV AV +TA
Sbjct: 134 GNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAV 193
Query: 543 XXXXXXXXXAGAITILLTDRNLNTSFF 623
A IT+LLTDRNLNT+FF
Sbjct: 194 LLLLSLPVLAAGITMLLTDRNLNTTFF 220
Score = 57.2 bits (132), Expect = 4e-07
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 219 FFDPAGGGDPILYQHLFWFFGHPE 242
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 165 bits (400), Expect = 1e-39
Identities = 90/181 (49%), Positives = 103/181 (56%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSIL 142
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
+ + LFV +V ITA AGAIT+LLTDRN NTSF
Sbjct: 143 GAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSF 202
Query: 621 F 623
F
Sbjct: 203 F 203
Score = 43.6 bits (98), Expect = 0.005
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF 669
FFDPAGGGDPILYQHLF
Sbjct: 202 FFDPAGGGDPILYQHLF 218
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 164 bits (399), Expect = 2e-39
Identities = 94/207 (45%), Positives = 109/207 (52%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 14 DIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPV 73
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 74 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLA 133
Query: 363 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 542
N+AH G SVDL IFSLHLAG+SS + Q PLFV +V +TA
Sbjct: 134 GNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAV 193
Query: 543 XXXXXXXXXAGAITILLTDRNLNTSFF 623
A IT+LLTDRNLNT+FF
Sbjct: 194 LLLLSLPVLAAGITMLLTDRNLNTTFF 220
Score = 57.2 bits (132), Expect = 4e-07
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 219 FFDPAGGGDPILYQHLFWFFGHPE 242
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 162 bits (394), Expect = 6e-39
Identities = 93/207 (44%), Positives = 109/207 (52%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 14 DIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPI 73
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N LVPL++GAPD+AFPR+NN+ F +VE GAGTG TVYPPL+
Sbjct: 74 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLA 133
Query: 363 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 542
N +H G SVDL IFSLHLAG+SS + Q PLFV +V ITA
Sbjct: 134 GNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAV 193
Query: 543 XXXXXXXXXAGAITILLTDRNLNTSFF 623
A IT+LLTDRNLNT+FF
Sbjct: 194 LLLLSLPVLAAGITMLLTDRNLNTTFF 220
Score = 57.2 bits (132), Expect = 4e-07
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 219 FFDPAGGGDPILYQHLFWFFGHPE 242
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 160 bits (388), Expect = 3e-38
Identities = 90/207 (43%), Positives = 109/207 (52%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 15 DIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPT 74
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N VPL++GAPD+AFPR+NNI F +VE GAGTG TVYPPL+
Sbjct: 75 MIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLA 134
Query: 363 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 542
S AH G SVD+AIFSLHLAG+SS + ++PLFV +V ITA
Sbjct: 135 SIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAI 194
Query: 543 XXXXXXXXXAGAITILLTDRNLNTSFF 623
AGAIT+LLTDR NT+FF
Sbjct: 195 LLLLSLPVLAGAITMLLTDRYFNTTFF 221
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFG 681
FFDPAGGGDPILYQHLF FFG
Sbjct: 220 FFDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 153 bits (371), Expect = 4e-36
Identities = 91/209 (43%), Positives = 106/209 (50%), Gaps = 2/209 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPP
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPP 131
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
LS +H G SVDLAIFSLHL+GISS + +LPLFV A+ +T
Sbjct: 132 LSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVT 191
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFF 623
A AGAIT+LLTDRN NTSF+
Sbjct: 192 AILLLLSLPVLAGAITMLLTDRNFNTSFY 220
Score = 56.0 bits (129), Expect = 8e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
F+DPAGGGDPILYQHLF FFGHPE
Sbjct: 219 FYDPAGGGDPILYQHLFWFFGHPE 242
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 153 bits (371), Expect = 4e-36
Identities = 91/209 (43%), Positives = 106/209 (50%), Gaps = 2/209 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPP
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPP 131
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
LS +H G SVDLAIFSLHL+GISS + +LPLFV A+ +T
Sbjct: 132 LSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVT 191
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFF 623
A AGAIT+LLTDRN NTSF+
Sbjct: 192 AILLLLSLPVLAGAITMLLTDRNFNTSFY 220
Score = 42.3 bits (95), Expect = 0.011
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF 669
F+DPAGGGDPILYQHLF
Sbjct: 219 FYDPAGGGDPILYQHLF 235
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 151 bits (366), Expect = 2e-35
Identities = 83/181 (45%), Positives = 101/181 (55%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIM 143
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
+ D++ LF +V ITA AGAIT+LLTDRN+NTSF
Sbjct: 144 GAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSF 203
Query: 621 F 623
F
Sbjct: 204 F 204
Score = 56.0 bits (129), Expect = 8e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FFDP+GGGDPILYQHLF FFGHPE
Sbjct: 203 FFDPSGGGDPILYQHLFWFFGHPE 226
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 150 bits (364), Expect = 3e-35
Identities = 86/209 (41%), Positives = 107/209 (51%), Gaps = 2/209 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 15 DIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVM 74
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N VP+++GAPD+AFPR+NNI F +VE G+GTG TVYPP
Sbjct: 75 PAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPP 134
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
LS +H G +VDLAIFSLHL+G+SS + +LPLFV +V +T
Sbjct: 135 LSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVT 194
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFF 623
AF AGAIT+LLTDRN NT+FF
Sbjct: 195 AFLLLLSLPVLAGAITMLLTDRNFNTTFF 223
Score = 57.2 bits (132), Expect = 4e-07
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 222 FFDPAGGGDPILYQHLFWFFGHPE 245
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 149 bits (361), Expect = 6e-35
Identities = 86/209 (41%), Positives = 108/209 (51%), Gaps = 2/209 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 20 DIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVM 79
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N LVP+++G+PD+AFPR+NNI F +VE G GTG TVYPP
Sbjct: 80 PVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPP 139
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
LSS +H G +VDLAIFSLH++G SS S ++PLFV ++ +T
Sbjct: 140 LSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVT 199
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFF 623
AF AGAIT+LLTDRN NTSFF
Sbjct: 200 AFLLLLAVPVLAGAITMLLTDRNFNTSFF 228
Score = 52.8 bits (121), Expect = 8e-06
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FFD +GGGDPILYQHLF FFGHPE
Sbjct: 227 FFDASGGGDPILYQHLFWFFGHPE 250
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 136 bits (328), Expect = 6e-31
Identities = 83/208 (39%), Positives = 98/208 (47%), Gaps = 1/208 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXX 179
DIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 14 DIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMP 73
Query: 180 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPL 359
N L+PL LG PD+ FPR+NNI + +ENG GTG T+YPPL
Sbjct: 74 ALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPL 133
Query: 360 SSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 539
S +H G SVDLAIF LHL+GISS +L LF AV ITA
Sbjct: 134 SGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITA 193
Query: 540 FXXXXXXXXXAGAITILLTDRNLNTSFF 623
AG IT++LTDRN NTSFF
Sbjct: 194 VLLLLSLPVLAGGITMVLTDRNFNTSFF 221
Score = 52.0 bits (119), Expect = 1e-05
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FF+ AGGGDPILYQHLF FFGHPE
Sbjct: 220 FFEVAGGGDPILYQHLFWFFGHPE 243
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 136 bits (328), Expect = 6e-31
Identities = 84/209 (40%), Positives = 100/209 (47%), Gaps = 2/209 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DI LY EL PGS L G+ Q++N +V HA
Sbjct: 13 DIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVM 72
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N L+PL++GA D AFPRINNI F +VE+GAGTG TVYPP
Sbjct: 73 PALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPP 132
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
LSS AH G SVDLAIF+LHL ISS + +LPLFV ++ IT
Sbjct: 133 LSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFIT 192
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFF 623
AF + IT+LL DRN NTSFF
Sbjct: 193 AFLLLLSLPVLSAGITMLLLDRNFNTSFF 221
Score = 49.6 bits (113), Expect = 7e-05
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FF+ +GGGDPILY+HLF FFGHPE
Sbjct: 220 FFEVSGGGDPILYEHLFWFFGHPE 243
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 136 bits (328), Expect = 6e-31
Identities = 84/209 (40%), Positives = 100/209 (47%), Gaps = 2/209 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DI LY EL PGS L G+ Q++N +V HA
Sbjct: 13 DIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVM 72
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N L+PL++GA D AFPRINNI F +VE+GAGTG TVYPP
Sbjct: 73 PALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPP 132
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
LSS AH G SVDLAIF+LHL ISS + +LPLFV ++ IT
Sbjct: 133 LSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFIT 192
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFF 623
AF + IT+LL DRN NTSFF
Sbjct: 193 AFLLLLSLPVLSAGITMLLLDRNFNTSFF 221
Score = 41.5 bits (93), Expect = 0.019
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFG 681
FF+ +GGGDPILY+HLF FFG
Sbjct: 220 FFEVSGGGDPILYEHLFWFFG 240
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 134 bits (325), Expect = 1e-30
Identities = 79/183 (43%), Positives = 97/183 (53%), Gaps = 2/183 (1%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 255 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
N+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 99 NSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISS 158
Query: 435 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 614
S ++PLFV A+ ITAF + IT+LL DRN NT
Sbjct: 159 LLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNT 218
Query: 615 SFF 623
SFF
Sbjct: 219 SFF 221
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FF+ AGGGDPI YQH F FFGHPE
Sbjct: 220 FFEVAGGGDPIFYQHAFWFFGHPE 243
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 130 bits (314), Expect = 3e-29
Identities = 73/182 (40%), Positives = 93/182 (51%), Gaps = 1/182 (0%)
Frame = +3
Query: 81 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 258 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 437
N+ + I+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 126 NVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSL 185
Query: 438 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 617
+L LF AV ITA A AIT+LLTDRNLNTS
Sbjct: 186 LGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTS 245
Query: 618 FF 623
F+
Sbjct: 246 FY 247
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
F++ AGGGD ILYQHLF FFGHPE
Sbjct: 246 FYELAGGGDAILYQHLFWFFGHPE 269
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 129 bits (311), Expect = 7e-29
Identities = 79/209 (37%), Positives = 99/209 (47%), Gaps = 2/209 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DI LY EL PG L G++Q++N +V HA
Sbjct: 13 DIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVM 72
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N ++PL++GA D AFPRINNI F +VE+GAGTG TVYPP
Sbjct: 73 PALIGGFGNYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPP 132
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
L+S AH G SVDLAIF+LH+ ISS + +LPLFV A+ IT
Sbjct: 133 LASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILIT 192
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFF 623
A + +T+LL DRN NTSFF
Sbjct: 193 AVLLLLTLPVLSAGVTMLLLDRNFNTSFF 221
Score = 42.7 bits (96), Expect = 0.008
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFG 681
FF+ AGGGDPILY+HLF FFG
Sbjct: 220 FFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 126 bits (303), Expect = 7e-28
Identities = 78/193 (40%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPP
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPP 131
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
LS +H G SVDLAIFSLHL+GISS + +LPLFV A+ +T
Sbjct: 132 LSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVT 191
Query: 537 AFXXXXXXXXXAG 575
A AG
Sbjct: 192 AILLLLSLPVLAG 204
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 123 bits (297), Expect = 4e-27
Identities = 67/178 (37%), Positives = 93/178 (52%)
Frame = +3
Query: 90 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 269
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 270 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 449
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 450 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFF 238
Score = 46.0 bits (104), Expect = 9e-04
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FF +GGGDP+LY+H+F FFGHPE
Sbjct: 237 FFVVSGGGDPLLYEHIFWFFGHPE 260
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 123 bits (297), Expect = 4e-27
Identities = 67/178 (37%), Positives = 93/178 (52%)
Frame = +3
Query: 90 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 269
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 270 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 449
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 450 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFF 238
Score = 46.0 bits (104), Expect = 9e-04
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FF +GGGDP+LY+H+F FFGHPE
Sbjct: 237 FFVVSGGGDPLLYEHIFWFFGHPE 260
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 123 bits (297), Expect = 4e-27
Identities = 67/178 (37%), Positives = 93/178 (52%)
Frame = +3
Query: 90 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 269
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 270 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 449
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 450 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFF 238
Score = 37.9 bits (84), Expect = 0.23
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFG 681
FF +GGGDP+LY+H+F FFG
Sbjct: 237 FFVVSGGGDPLLYEHIFWFFG 257
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 123 bits (297), Expect = 4e-27
Identities = 67/178 (37%), Positives = 93/178 (52%)
Frame = +3
Query: 90 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 269
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 270 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 449
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 450 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFF 238
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 122 bits (293), Expect = 1e-26
Identities = 72/183 (39%), Positives = 85/183 (46%), Gaps = 2/183 (1%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 255 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
NN F E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 102 NNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Query: 435 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 614
LPLFV +V +T+F A AIT+LL DRN NT
Sbjct: 162 IVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNT 221
Query: 615 SFF 623
SF+
Sbjct: 222 SFY 224
Score = 50.4 bits (115), Expect = 4e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
F+DP GGGD +LYQHLF FFGHPE
Sbjct: 223 FYDPVGGGDVVLYQHLFWFFGHPE 246
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 119 bits (286), Expect = 8e-26
Identities = 76/209 (36%), Positives = 95/209 (45%), Gaps = 2/209 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 18 DIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVM 77
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N L+PL+LGA D+AF R+NNI F +VE GAGTG TVY P
Sbjct: 78 PALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFP 137
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
L+ +H G +VDLAIFSLHL+G SS ++ +PLF AV T
Sbjct: 138 LAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFT 197
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFF 623
A A +T+ + DRN NTSFF
Sbjct: 198 AILLLLSLPVLAAGLTMGIFDRNFNTSFF 226
Score = 41.5 bits (93), Expect = 0.019
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FF+ AGGGD +LYQHLF ++ HPE
Sbjct: 225 FFEYAGGGDAVLYQHLFYWWNHPE 248
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 118 bits (284), Expect = 1e-25
Identities = 69/136 (50%), Positives = 78/136 (57%)
Frame = +3
Query: 216 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 395
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 396 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 575
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 576 AITILLTDRNLNTSFF 623
AIT+LLTDRN+NTSFF
Sbjct: 124 AITMLLTDRNINTSFF 139
Score = 49.6 bits (113), Expect = 7e-05
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGH 684
FFDPAGGGDPILYQHLF F GH
Sbjct: 138 FFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 115 bits (277), Expect = 1e-24
Identities = 77/212 (36%), Positives = 97/212 (45%), Gaps = 5/212 (2%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXX 179
DIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 42 DIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMP 101
Query: 180 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV---- 347
N L+PL++G PD+AFPR+NNI F I+E G GTG T+
Sbjct: 102 ALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDK 161
Query: 348 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 527
YPPLS +H G SVDLAIF+LHL+G+SS +L LF A
Sbjct: 162 YPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALFGWAT 221
Query: 528 GITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
+ IT++LTDRN NTSFF
Sbjct: 222 WSSRSRYFL-------GITMVLTDRNFNTSFF 246
Score = 50.4 bits (115), Expect = 4e-05
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FF+ AGGGDPIL+QHLF FFGHPE
Sbjct: 245 FFEVAGGGDPILFQHLFWFFGHPE 268
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 110 bits (264), Expect = 4e-23
Identities = 61/184 (33%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Frame = +3
Query: 78 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 251
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 252 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 431
+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G S
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGAS 262
Query: 432 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 611
S + ++PLF +V +TA+ AGAIT+LLTDRN
Sbjct: 263 SILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFG 322
Query: 612 TSFF 623
T+FF
Sbjct: 323 TTFF 326
Score = 54.8 bits (126), Expect = 2e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FFDPAGGGDPIL+QH+F FFGHPE
Sbjct: 325 FFDPAGGGDPILFQHIFWFFGHPE 348
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 106 bits (255), Expect = 4e-22
Identities = 64/172 (37%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Frame = +3
Query: 120 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 299
++N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 300 XXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 467
V NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTI 211
Query: 468 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
+ ++PLFV +V +TAF A AIT+LLTDRN T+F+
Sbjct: 212 LNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFY 263
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
F+D AGGGDP LYQHLF FFGHPE
Sbjct: 262 FYDAAGGGDPELYQHLFWFFGHPE 285
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 99.1 bits (236), Expect = 9e-20
Identities = 56/176 (31%), Positives = 76/176 (43%)
Frame = +3
Query: 96 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXX 275
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 276 XXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXX 455
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 108 YLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINL 167
Query: 456 XXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
SF LF+ A ITA AG +T++L DRN NTSF+
Sbjct: 168 LGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFY 223
Score = 44.4 bits (100), Expect = 0.003
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
F+D GGGD IL+QH+F FFGHPE
Sbjct: 222 FYDVVGGGDLILFQHIFWFFGHPE 245
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 93.5 bits (222), Expect = 4e-18
Identities = 56/183 (30%), Positives = 79/183 (43%), Gaps = 2/183 (1%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 255 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
N + F + G G+ T YPPLS S+D I LH GI S
Sbjct: 109 NALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGS 167
Query: 435 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 614
+ DQ+ +FV +T+F AG++ LL DRN NT
Sbjct: 168 LLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNT 227
Query: 615 SFF 623
SF+
Sbjct: 228 SFY 230
Score = 44.8 bits (101), Expect = 0.002
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
F+D GG+P+LYQHLF FFGHPE
Sbjct: 229 FYDTKKGGNPLLYQHLFWFFGHPE 252
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 91.5 bits (217), Expect = 2e-17
Identities = 49/95 (51%), Positives = 57/95 (60%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 258 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N+ F VE GAGTG TVYPPL+
Sbjct: 100 NMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 88.2 bits (209), Expect = 2e-16
Identities = 51/118 (43%), Positives = 61/118 (51%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
+ F + G + PL G SVDLAIF LHLAG+SS
Sbjct: 84 MSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 87.4 bits (207), Expect = 3e-16
Identities = 56/208 (26%), Positives = 87/208 (41%), Gaps = 1/208 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGT+Y EL +PG + +Y++I+T HA
Sbjct: 16 DIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPT 75
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N +PL++ D++ PR+NN+ + G G G T+YPPLS
Sbjct: 76 SIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLS 135
Query: 363 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITA 539
++ G +DLA+FSLH+AG+SS F L P+ + + T+
Sbjct: 136 NSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTS 195
Query: 540 FXXXXXXXXXAGAITILLTDRNLNTSFF 623
A +T+LL DR+ +TSF+
Sbjct: 196 ILLVTSVPVLAAGLTLLLLDRHFSTSFY 223
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
F+ P GGGDPIL+QHLF FFGHPE
Sbjct: 222 FYYPEGGGDPILWQHLFWFFGHPE 245
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 80.6 bits (190), Expect = 3e-14
Identities = 55/156 (35%), Positives = 72/156 (46%)
Frame = +3
Query: 216 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 395
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 396 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 575
LAI+S I+ +F + + F +
Sbjct: 61 LAIYS---TVINMRSAGITLDRFFFTFSSNFLNFSITFICMICCNYCYFITSFFTCFSSS 117
Query: 576 AITILLTDRNLNTSFF*SCWRRRPNFISTFILIFWT 683
I+ ++ F+ + W P +STFILIFWT
Sbjct: 118 HYYIINWPKSKYFIFWPN-WSSSPYSLSTFILIFWT 152
Score = 37.9 bits (84), Expect = 0.23
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +2
Query: 515 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 622
CM C +Y TCFS S+Y IIN K KY IF
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIF 132
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 79.0 bits (186), Expect = 1e-13
Identities = 66/194 (34%), Positives = 77/194 (39%)
Frame = +3
Query: 84 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 263
L G +IG QI VTA A L PL +GAP +A PR+ N+
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 264 RFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXX 443
F + G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 91 SFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISSXLG 150
Query: 444 XXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
++ LF A AIT+L R N SFF
Sbjct: 151 SMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPVLAAAITMLXXXRXXNXSFF 210
Query: 624 *SCWRRRPNFISTF 665
P TF
Sbjct: 211 XPXXXGXPXXFPTF 224
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 76.6 bits (180), Expect = 5e-13
Identities = 49/125 (39%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N LVP+++GAPD+AFPR+NNI F VE GAGTG TV
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCK 131
Query: 357 LSSNI 371
LS I
Sbjct: 132 LSQII 136
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +3
Query: 354 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 533
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 534 TAFXXXXXXXXXAGAITILLTDR 602
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 188 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 313
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 69.7 bits (163), Expect = 6e-11
Identities = 63/215 (29%), Positives = 85/215 (39%), Gaps = 8/215 (3%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIG LY EL +PG + + YN+++T+H
Sbjct: 96 DIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPI 155
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRF--XXXXXXXXXXXXXXIVE-NGAGTG*TVYP 353
N L+PL++GA D+AFPRIN I F I E A TG T+Y
Sbjct: 156 IAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYT 214
Query: 354 PLS-----SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 518
PLS N A+ G VDL + LHL+G+S+ S+ L +F
Sbjct: 215 PLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLDIFS 272
Query: 519 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
+ + AI +LL DRN TSFF
Sbjct: 273 WTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSFF 307
Score = 35.9 bits (79), Expect = 0.93
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +1
Query: 631 AGGGDPILYQHLF*FFGHPE 690
AG G IL+QHLF FFGHPE
Sbjct: 308 AGEGGAILWQHLFWFFGHPE 327
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 69.3 bits (162), Expect = 8e-11
Identities = 40/117 (34%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 16 DIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVM 75
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 347
N VP+++G+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 76 PAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 68.1 bits (159), Expect = 2e-10
Identities = 45/168 (26%), Positives = 65/168 (38%), Gaps = 1/168 (0%)
Frame = +3
Query: 123 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 302
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 303 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 479
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 480 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
++ +LPL + + +TA A +LL DR+ T FF
Sbjct: 206 APGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFF 253
Score = 41.1 bits (92), Expect = 0.025
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 634 GGGDPILYQHLF*FFGHPE 690
GGGDPIL+QHLF FGHPE
Sbjct: 262 GGGDPILWQHLFWIFGHPE 280
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 67.7 bits (158), Expect = 3e-10
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 1/169 (0%)
Frame = +3
Query: 120 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 299
+YN I T H N +P++ G+P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLV 117
Query: 300 XXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISSXXXXXXXXXXXXXX 476
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 118 ILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHL 177
Query: 477 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
+ L + ++ IT+ G + +LL+D + NT FF
Sbjct: 178 RAKGLTLGILSVSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFF 226
Score = 49.6 bits (113), Expect = 7e-05
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FFDP GDPILYQHLF FFGHPE
Sbjct: 225 FFDPTFAGDPILYQHLFWFFGHPE 248
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 66.5 bits (155), Expect = 6e-10
Identities = 43/169 (25%), Positives = 69/169 (40%)
Frame = +3
Query: 117 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 296
+IYN + T H N L P++LG D+ +PR+N
Sbjct: 60 EIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVL 119
Query: 297 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 476
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 120 VVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSV 177
Query: 477 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
D++ ++ +T+F ++ DR+ NT FF
Sbjct: 178 KTIGFVIDRISPAAWSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFF 226
Score = 46.0 bits (104), Expect = 9e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FF+ + GDP+LYQHLF FFGHPE
Sbjct: 225 FFESSNSGDPVLYQHLFWFFGHPE 248
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 65.7 bits (153), Expect = 1e-09
Identities = 49/177 (27%), Positives = 70/177 (39%)
Frame = +3
Query: 93 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 272
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 273 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 452
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 453 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
+F + LFV + AGA+T+L D+ L T+FF
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFF 176
Score = 41.5 bits (93), Expect = 0.019
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +1
Query: 616 HFFDPAGGGDPILYQHLF*FFGHP 687
+FF+PA GGDP++YQ++F F+ HP
Sbjct: 174 NFFNPAKGGDPLIYQNIFWFYSHP 197
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 63.3 bits (147), Expect = 5e-09
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 2/170 (1%)
Frame = +3
Query: 120 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 299
IYN +T H N L+P+++G +++ PR+N I F
Sbjct: 63 IYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIF 122
Query: 300 XXXXI-VENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXX 473
+ + +G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 123 VISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKY 182
Query: 474 XXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
+F + ++ ++ +T+ AIT LL DRN+N++ +
Sbjct: 183 NRHVGLTFMNINIYNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIY 232
Score = 40.3 bits (90), Expect = 0.043
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 640 GDPILYQHLF*FFGHPE 690
GDP+LYQHLF FFGHPE
Sbjct: 236 GDPVLYQHLFWFFGHPE 252
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 63.3 bits (147), Expect = 5e-09
Identities = 43/125 (34%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 18 DIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVM 77
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N L+PL+LGA D+AF R+NNI F +VE GAGTG TV
Sbjct: 78 PALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKI 137
Query: 357 LSSNI 371
SS +
Sbjct: 138 CSSKM 142
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 61.7 bits (143), Expect = 2e-08
Identities = 51/181 (28%), Positives = 74/181 (40%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
+L P L D +YN VT H N L+P PD+ FPR+N
Sbjct: 37 QLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNA 94
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ F ++ + A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 95 LSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIASLI 145
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
+ L LF ++ + + A IT++LTD++L T F
Sbjct: 146 SSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCF 203
Query: 621 F 623
+
Sbjct: 204 Y 204
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
F+D GGDP+LYQHLF FFGHPE
Sbjct: 203 FYDATMGGDPLLYQHLFWFFGHPE 226
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 312 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 59.3 bits (137), Expect = 9e-08
Identities = 51/208 (24%), Positives = 73/208 (35%), Gaps = 1/208 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIG LY +L P S Y VT H
Sbjct: 23 DIGLLYLVTSIAFLLIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFASPF 82
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPL 359
N +VPL +GA D+AFPR+N + + E+GA G T+Y PL
Sbjct: 83 AFGLA-NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPL 141
Query: 360 SSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 539
++ I G +DLA ++ L +S + ++P+F ++ T
Sbjct: 142 TARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTV 201
Query: 540 FXXXXXXXXXAGAITILLTDRNLNTSFF 623
+LL DRNL T FF
Sbjct: 202 ILMLWAFPPLMVGGALLLLDRNLGTEFF 229
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
F +PAGG +L+ HLF FFGHPE
Sbjct: 229 FLNPAGGA--LLWDHLFWFFGHPE 250
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 58.0 bits (134), Expect = 2e-07
Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 4/173 (2%)
Frame = +3
Query: 117 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 296
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 297 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 464
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 465 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
+ +LPL + A+ ITA A ++L DR + T FF
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFF 258
Score = 36.3 bits (80), Expect = 0.71
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 631 AGGGDPILYQHLF*FFGHP 687
AGGG P+L+QHLF F+ HP
Sbjct: 272 AGGGQPLLWQHLFWFYSHP 290
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 57.6 bits (133), Expect = 3e-07
Identities = 49/209 (23%), Positives = 75/209 (35%), Gaps = 2/209 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIG LY EL + +YN ++T+H
Sbjct: 70 DIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPM 129
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPP 356
N +PL++ A D+AFPRIN I F ++ A T T+Y P
Sbjct: 130 IAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTP 188
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
LS ++ +VD+ + LHL G+S+ + L +F +
Sbjct: 189 LSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSWTMLTQ 246
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFF 623
+ A+ +LL DRN T+FF
Sbjct: 247 SGLILFAFPLFGSALIMLLLDRNFGTTFF 275
Score = 40.3 bits (90), Expect = 0.043
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +1
Query: 622 FDPAGGGDPILYQHLF*FFGHPE 690
F GGDPI +QHLF FFGHPE
Sbjct: 274 FFTVAGGDPIFWQHLFWFFGHPE 296
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 57.2 bits (132), Expect = 4e-07
Identities = 45/181 (24%), Positives = 68/181 (37%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
+L P + +++N + T H N VPL++GA D+AFPR+N+
Sbjct: 60 QLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNS 118
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
F + + G Y PLSS + VD I L + GI S
Sbjct: 119 FGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWIIGLLIMGIGSVS 178
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
S ++PLFV + + A A+ +LL DR L ++F
Sbjct: 179 GAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAF 238
Query: 621 F 623
F
Sbjct: 239 F 239
Score = 39.9 bits (89), Expect = 0.057
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FFDP GG +L+QH F FGHPE
Sbjct: 238 FFDPTRGGSAVLWQHYFWIFGHPE 261
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 57.2 bits (132), Expect = 4e-07
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 255 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 347
NNI F +VE+GAGTG TV
Sbjct: 99 NNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 56.8 bits (131), Expect = 5e-07
Identities = 44/182 (24%), Positives = 64/182 (35%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
A+L P + D YN I T H N +VPL +GA D+AFP +N
Sbjct: 80 AQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLN 138
Query: 258 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 437
N+ F ++ G T Y PL+SN G + + L +AGI +
Sbjct: 139 NLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAGIGTL 198
Query: 438 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 617
+ ++P+F IT A+ +L DR
Sbjct: 199 MTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAH 258
Query: 618 FF 623
FF
Sbjct: 259 FF 260
Score = 32.7 bits (71), Expect = 8.7
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 616 HFFDPAGGGDPILYQHLF*FFGHPE 690
HFF GG P+L+ +LF +GHPE
Sbjct: 258 HFFTLEAGGMPMLWANLFWIWGHPE 282
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 56.4 bits (130), Expect = 6e-07
Identities = 49/168 (29%), Positives = 65/168 (38%)
Frame = +3
Query: 120 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 299
+YN +VT H N +P+ L D+ PR+N++
Sbjct: 151 VYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYM 210
Query: 300 XXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 479
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 211 ELSLYY--GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS----LIGSVNFISTI 263
Query: 480 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
SF+ + V A T+ A IT+LL DRN T+FF
Sbjct: 264 FSRLSFN-CSIIVWAYLFTSVLLLLSLPVLASGITMLLFDRNFGTAFF 310
Score = 52.8 bits (121), Expect = 8e-06
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FF+P+GGGDPIL+QHLF FFGHPE
Sbjct: 309 FFEPSGGGDPILFQHLFWFFGHPE 332
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 56.0 bits (129), Expect = 8e-07
Identities = 47/176 (26%), Positives = 67/176 (38%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
EL PG I D YN T H N ++PL+LGA D+AFPR+N
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNL 129
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ ++ G TG T Y P S AH +V +F + G SS
Sbjct: 130 LSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYS---AHTTTTVAPVLFGAFIIGFSSIV 185
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 608
++ ++PLFV A+ T+ G + +L+T NL
Sbjct: 186 TGINFIVTCHTMRAPGITWFKMPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENL 240
Score = 44.0 bits (99), Expect = 0.004
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 622 FDPAGGGDPILYQHLF*FFGHP 687
FDPA GGDP+L+QHLF F+ HP
Sbjct: 246 FDPARGGDPVLFQHLFWFYSHP 267
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 55.6 bits (128), Expect = 1e-06
Identities = 47/184 (25%), Positives = 69/184 (37%), Gaps = 3/184 (1%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
EL P + + D +YN + T H N L+P ++GAPD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 261 IRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNIAHRGRSVDLAIFSLHLAGIS 431
F G A +G YPP+S + + H L I ++ L+GIS
Sbjct: 123 AAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEFLWILAVALSGIS 182
Query: 432 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 611
S F ++P+FV G +LL D +
Sbjct: 183 SIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFG 242
Query: 612 TSFF 623
TSFF
Sbjct: 243 TSFF 246
Score = 42.7 bits (96), Expect = 0.008
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHP 687
FF P GGGDP+L+QH F F+ HP
Sbjct: 245 FFRPEGGGDPVLFQHFFWFYSHP 267
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 54.4 bits (125), Expect = 2e-06
Identities = 43/153 (28%), Positives = 61/153 (39%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
EL PG I D YN + T H N L+P+++GA D+AFP++N
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ F +V+ GA TG T Y P S+ + V L F L G SS
Sbjct: 123 LSF-YVYLAGAVVALFGMVQGGADTGWTFYTPYSTTTITKVVPVLLGAFIL---GFSSIL 178
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 539
+ +LPLFV ++ T+
Sbjct: 179 TGLNFIVTTHTMRAPGMGWTRLPLFVWSIYATS 211
Score = 42.3 bits (95), Expect = 0.011
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 622 FDPAGGGDPILYQHLF*FFGHP 687
FDPA GGDP+L+QH F F+ HP
Sbjct: 239 FDPARGGDPVLFQHFFWFYSHP 260
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 54.4 bits (125), Expect = 2e-06
Identities = 44/181 (24%), Positives = 64/181 (35%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
+LG P + +YN + T H N +VPL++GA D+AFPR+N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLNA 117
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ V G Y PL+ VD I + L G++S
Sbjct: 118 LSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVDYWIVGIGLTGVASIA 177
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
+ +++PLFV + AF A LL DR+ T F
Sbjct: 178 GALNFIVTILNMRAPGMTLNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRF 237
Query: 621 F 623
F
Sbjct: 238 F 238
Score = 41.1 bits (92), Expect = 0.025
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FF P GGD +L+QHLF FFGHPE
Sbjct: 237 FFLPNLGGDAVLWQHLFWFFGHPE 260
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 53.6 bits (123), Expect = 4e-06
Identities = 47/182 (25%), Positives = 68/182 (37%), Gaps = 1/182 (0%)
Frame = +3
Query: 81 ELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
+L P + IG D+ YN I T H LVPL++G IAFPR+N
Sbjct: 57 QLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMVGTRHIAFPRLN 114
Query: 258 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 437
+ V+ G G Y PLS G+ D+ + +S+
Sbjct: 115 AFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWAQMITFTEVSAL 174
Query: 438 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 617
S D++PLFV ++ +T+F A T L+ DR + T
Sbjct: 175 AIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTH 234
Query: 618 FF 623
FF
Sbjct: 235 FF 236
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +1
Query: 616 HFFDPAGGGDPILYQHLF*FFGHPE 690
HFF+PA GGD +L+QHLF FFGHPE
Sbjct: 234 HFFNPAEGGDVLLWQHLFWFFGHPE 258
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 53.2 bits (122), Expect = 6e-06
Identities = 49/181 (27%), Positives = 65/181 (35%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
EL P ++YN ++T H N L+PL++G D+AFPR+N
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ F V G T YPPLS G +L I SL L G SS
Sbjct: 114 VAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGE--ELWILSLLLVGTSSIL 170
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
+PLF A+ T+ A A+ +L D TSF
Sbjct: 171 GAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSF 230
Query: 621 F 623
F
Sbjct: 231 F 231
Score = 46.4 bits (105), Expect = 7e-04
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHP 687
FF+P GGGDP++YQHLF F+ HP
Sbjct: 230 FFNPVGGGDPVVYQHLFWFYSHP 252
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 52.4 bits (120), Expect = 1e-05
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FFDPAGGGD IL+QHLF FFGHPE
Sbjct: 196 FFDPAGGGDXILFQHLFXFFGHPE 219
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 50.8 bits (116), Expect = 3e-05
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 4/175 (2%)
Frame = +3
Query: 111 DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXX 290
+ + Y +VT H N L+PL +GA D+A +N + +
Sbjct: 98 EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSS 157
Query: 291 XXXXXXXIVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 458
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 158 VIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYI 217
Query: 459 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
SF +LPL + A ITA A +L+ DR+L TSFF
Sbjct: 218 TTVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFF 272
Score = 36.3 bits (80), Expect = 0.71
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 637 GGDPILYQHLF*FFGHPE 690
GG P+L+QHLF F GHPE
Sbjct: 287 GGSPVLFQHLFWFLGHPE 304
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 50.4 bits (115), Expect = 4e-05
Identities = 38/142 (26%), Positives = 58/142 (40%), Gaps = 1/142 (0%)
Frame = +3
Query: 201 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 377
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 378 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 557
+ VDL + + +AG SS + LF +V +
Sbjct: 144 KSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTA 203
Query: 558 XXXXAGAITILLTDRNLNTSFF 623
A +LL +R+L FF
Sbjct: 204 LPPLAAGAIMLLLERHLGMHFF 225
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/30 (63%), Positives = 21/30 (70%), Gaps = 5/30 (16%)
Frame = +1
Query: 616 HFF-----DPAGGGDPILYQHLF*FFGHPE 690
HFF DPA GDP L+QH+F FFGHPE
Sbjct: 223 HFFTPVPGDPAASGDPRLFQHIFWFFGHPE 252
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 50.0 bits (114), Expect = 5e-05
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+N
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
Query: 258 NIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
F + GA G T+Y PLS I G D+ I + GI S
Sbjct: 124 AFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPGLGSDMWIVGVGATGIGS 183
Score = 41.9 bits (94), Expect = 0.014
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1
Query: 616 HFFDPAGGGDPILYQHLF*FFGHPE 690
H +DPA GG +L+QHLF FFGHPE
Sbjct: 244 HLYDPANGGS-LLWQHLFWFFGHPE 267
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 49.6 bits (113), Expect = 7e-05
Identities = 47/183 (25%), Positives = 69/183 (37%), Gaps = 2/183 (1%)
Frame = +3
Query: 81 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
EL G I DD +YNT + H N +PL++GA D+AFPR+N
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
Query: 258 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 437
+ + + T YPP S I H + FS+ L G +S
Sbjct: 102 ALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHGNTA--FYTFSVLLLGFASI 158
Query: 438 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG-AITILLTDRNLNT 614
+++L +FV A + AF G A+T+L D+ + T
Sbjct: 159 LGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGT 217
Query: 615 SFF 623
FF
Sbjct: 218 HFF 220
Score = 40.3 bits (90), Expect = 0.043
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 616 HFFDPAGGGDPILYQHLF*FFGHP 687
HFFD A GGD + YQ+LF F+ HP
Sbjct: 218 HFFDAAAGGDALTYQNLFWFYSHP 241
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 49.2 bits (112), Expect = 9e-05
Identities = 37/141 (26%), Positives = 54/141 (38%)
Frame = +3
Query: 201 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 380
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 381 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 560
VD I++L ++GI + +P+F
Sbjct: 185 DVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFTWTCTWANVLIATSF 244
Query: 561 XXXAGAITILLTDRNLNTSFF 623
GA+ +L DR L+ FF
Sbjct: 245 PILTGALAMLALDRYLDFHFF 265
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 47.6 bits (108), Expect = 3e-04
Identities = 36/181 (19%), Positives = 65/181 (35%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
+L P + Q YN ++T H N +VPL +GA D++FP +N
Sbjct: 52 QLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQIGARDVSFPFLNA 110
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ F + G T Y LS + +G +D + L ++G+ +
Sbjct: 111 LGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFVLGLQISGLGTLI 168
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
++ +LPLF + + + +++ DR T+F
Sbjct: 169 AGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNF 228
Query: 621 F 623
F
Sbjct: 229 F 229
Score = 37.5 bits (83), Expect = 0.31
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 616 HFFDPAGGGDPILYQHLF*FFGHPE 690
+FF+P GG+ ++++HLF FGHPE
Sbjct: 227 NFFNPELGGNTVIWEHLFWIFGHPE 251
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 47.6 bits (108), Expect = 3e-04
Identities = 42/182 (23%), Positives = 65/182 (35%), Gaps = 1/182 (0%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
+L P + + YN I+T H N +VPL+LGA D+A PR+N
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVNA 111
Query: 261 IRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 437
+ GA G T Y P S A VD + ++ L G SS
Sbjct: 112 FSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQSESGVDFYLAAILLLGFSSL 168
Query: 438 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 617
S ++P++V +V + A ++L +R + S
Sbjct: 169 LGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLS 228
Query: 618 FF 623
+F
Sbjct: 229 WF 230
Score = 37.1 bits (82), Expect = 0.40
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHP 687
+F+PA GGDP+L+Q F F+ HP
Sbjct: 229 WFNPAVGGDPVLFQQFFWFYSHP 251
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +2
Query: 518 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 622
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FFDP GGDP+L+QHLF FGHPE
Sbjct: 261 FFDPERGGDPLLWQHLFWIFGHPE 284
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 45.2 bits (102), Expect = 0.002
Identities = 35/141 (24%), Positives = 51/141 (36%)
Frame = +3
Query: 201 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 380
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 381 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 560
G VD I++L L+G+ + +P+F
Sbjct: 184 GVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASF 243
Query: 561 XXXAGAITILLTDRNLNTSFF 623
A+ +L DR L+ F
Sbjct: 244 PILTAALALLTVDRYLDFHIF 264
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FF+ A GGDPIL QHLF FFGHPE
Sbjct: 380 FFEYAYGGDPILSQHLFWFFGHPE 403
Score = 37.9 bits (84), Expect = 0.23
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 81 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 255 NNIRF 269
N+I F
Sbjct: 148 NSIGF 152
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 44.0 bits (99), Expect = 0.004
Identities = 41/158 (25%), Positives = 59/158 (37%), Gaps = 1/158 (0%)
Frame = +3
Query: 201 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 380
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 381 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 560
G VD I+SL LA + S +PLF TA
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
Query: 561 XXXAGAITILLTDRNLNTSFF*S-CWRRRPNFISTFIL 671
L DR L+ FF + + NF++ F L
Sbjct: 264 PPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWL 301
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 44.0 bits (99), Expect = 0.004
Identities = 34/123 (27%), Positives = 41/123 (33%)
Frame = +2
Query: 245 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTTFSX 424
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPTSCS 138
Query: 425 XXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIINRSK 604
CM +YS + S+YNI K
Sbjct: 139 SVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTSFSPSIGSSHYNITYWPK 198
Query: 605 LKY 613
KY
Sbjct: 199 PKY 201
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 44.0 bits (99), Expect = 0.004
Identities = 47/186 (25%), Positives = 68/186 (36%), Gaps = 5/186 (2%)
Frame = +3
Query: 81 ELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
+LG PG+ D Y +T H N L+PL++GA D+ FP +N
Sbjct: 66 QLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVFPYVN 125
Query: 258 NIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP--LSSNIAHRGRSVDLAIFSLHLAGI 428
+ + V G G G T+YPP + S + + L + SL L I
Sbjct: 126 MLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGTPGQDWGIVLMLSSLILFII 185
Query: 429 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV-GITAFXXXXXXXXXAGAITILLTDRN 605
+ +LPL V + T G++ +LL DR
Sbjct: 186 GFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMALLAFPALFVGSVMLLL-DRL 244
Query: 606 LNTSFF 623
L TSFF
Sbjct: 245 LGTSFF 250
Score = 40.7 bits (91), Expect = 0.033
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 634 GGGDPILYQHLF*FFGHPE 690
GGG P+L+QHLF FFGHPE
Sbjct: 264 GGGSPLLFQHLFWFFGHPE 282
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +1
Query: 616 HFFDPAGGGDPILYQHLF*FFGHPE 690
HFF A GDPIL+QHLF FFGHPE
Sbjct: 241 HFFT-AASGDPILWQHLFWFFGHPE 264
Score = 40.7 bits (91), Expect = 0.033
Identities = 31/139 (22%), Positives = 50/139 (35%)
Frame = +3
Query: 207 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 386
++PL+LG D+ FPR+N + ++ G YPPL+ G
Sbjct: 105 IIPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGL 164
Query: 387 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 566
+D + IS+ S +++P+FV AV + +F
Sbjct: 165 GLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPP 224
Query: 567 XAGAITILLTDRNLNTSFF 623
A +L DR FF
Sbjct: 225 LVIASLMLALDRMAGMHFF 243
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FF GGDP+L+QHLF FFGHPE
Sbjct: 245 FFTAERGGDPLLWQHLFWFFGHPE 268
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 42.7 bits (96), Expect = 0.008
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FFD GGDP+L+QHLF FGHPE
Sbjct: 261 FFDHTLGGDPLLWQHLFWLFGHPE 284
Score = 40.7 bits (91), Expect = 0.033
Identities = 31/139 (22%), Positives = 52/139 (37%)
Frame = +3
Query: 207 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 386
L+PL++GA D+ FPR+ + + + G +Y PLS++ G
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183
Query: 387 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 566
S D + + LA I+S S ++P+ + + TAF
Sbjct: 184 SADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPP 243
Query: 567 XAGAITILLTDRNLNTSFF 623
+L +R L FF
Sbjct: 244 LIIGSILLEAERLLGLPFF 262
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 42.3 bits (95), Expect = 0.011
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +3
Query: 201 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 380
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 381 GRSVDLAIFSLHLAGISS 434
VD +S+ ++GI +
Sbjct: 179 WVGVDYWNWSIQISGIGT 196
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 41.9 bits (94), Expect = 0.014
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FFD A GG P+L+Q LF FFGHPE
Sbjct: 217 FFDSALGGSPVLWQQLFWFFGHPE 240
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 41.5 bits (93), Expect = 0.019
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FF GGDP+L+QHLF FFGHPE
Sbjct: 304 FFAAHLGGDPLLWQHLFWFFGHPE 327
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 41.5 bits (93), Expect = 0.019
Identities = 36/172 (20%), Positives = 57/172 (33%), Gaps = 3/172 (1%)
Frame = +3
Query: 117 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 296
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 297 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 467
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 468 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
+F +LP+ + + ITA + + DR T FF
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFF 261
Score = 34.7 bits (76), Expect = 2.2
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 634 GGGDPILYQHLF*FFGHP 687
GGG P+L+QHLF F+ HP
Sbjct: 276 GGGQPLLWQHLFWFYSHP 293
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 40.7 bits (91), Expect = 0.033
Identities = 34/154 (22%), Positives = 54/154 (35%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
A+L P S + YN + T H L+P +LG+ D+AFPR+
Sbjct: 56 AQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLLGSRDLAFPRLT 114
Query: 258 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 437
F + +G +YPPLSS + G + D + + IS+
Sbjct: 115 AYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGINSDFWLIGITFVEISAI 174
Query: 438 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 539
S ++P+F +TA
Sbjct: 175 AAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTA 208
Score = 40.7 bits (91), Expect = 0.033
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FF A GGD +L+QHLF FGHPE
Sbjct: 235 FFQAAAGGDALLWQHLFWLFGHPE 258
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 40.7 bits (91), Expect = 0.033
Identities = 40/181 (22%), Positives = 63/181 (34%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
+L P + + Y+++ T H N L PL+LG+ D+AFPR+
Sbjct: 77 QLARPNATVLTPAQYDSLFTMHGVTMIFLYALPVLSGFA-NYLWPLMLGSRDMAFPRLTA 135
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ + G Y PL+S G ++D+ + L GIS+
Sbjct: 136 FSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSAGANIDIYGLGMILLGISTTG 195
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
S D+LP+ V + + A +L DRN T F
Sbjct: 196 GAANFVVTLLRMRAHGMSIDRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAGTHF 255
Query: 621 F 623
F
Sbjct: 256 F 256
Score = 40.7 bits (91), Expect = 0.033
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +1
Query: 616 HFFDPAGGGDPILYQHLF*FFGHP 687
HFFD A GG P+L+QHLF F HP
Sbjct: 254 HFFDVAHGGRPLLWQHLFWMFAHP 277
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 40.7 bits (91), Expect = 0.033
Identities = 43/209 (20%), Positives = 69/209 (33%), Gaps = 2/209 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIG LY EL + G+ + YN V+ H
Sbjct: 24 DIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFISPF 83
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N LVPL +GA D+AFPR+N + + G T+Y PL+
Sbjct: 84 AFGFA-NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLN 142
Query: 363 --SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
+ I G + +L + + +P+F ++ +T
Sbjct: 143 TPAYIPGEGLGATSVVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLSINLT 202
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFF 623
+ A+ IL +D L T++F
Sbjct: 203 VWMMLFAFAALLAALMILASDHILGTTYF 231
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 40.3 bits (90), Expect = 0.043
Identities = 35/140 (25%), Positives = 52/140 (37%), Gaps = 1/140 (0%)
Frame = +3
Query: 207 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 383
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 384 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 563
D A ++ L GI + LPLFV AV A
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFP 230
Query: 564 XXAGAITILLTDRNLNTSFF 623
G +LL ++ S++
Sbjct: 231 EITGLFFLLLVGNLMHASYY 250
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 40.3 bits (90), Expect = 0.043
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FF+PA GGDPI Y HLF F HPE
Sbjct: 221 FFNPAVGGDPIAYAHLFWFTFHPE 244
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 39.5 bits (88), Expect = 0.076
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +1
Query: 619 FFDPAGGGDPILYQHLF*FFGHPE 690
FF A GGD +L+QHLF FGHPE
Sbjct: 235 FFQVAEGGDSLLWQHLFWLFGHPE 258
Score = 37.9 bits (84), Expect = 0.23
Identities = 29/146 (19%), Positives = 53/146 (36%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
A+L +P S + Y + T H L+P +LG+ D+A+PR++
Sbjct: 56 AQLASPRSAFVGAETYAQLFTMHGTIMMFLFAIPMFEGLTIY-LLPKMLGSRDLAYPRLS 114
Query: 258 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 437
F + +G +YPPL+S + G + D + + IS+
Sbjct: 115 AYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGINSDFWLLGITFVEISAI 174
Query: 438 XXXXXXXXXXXXXXXXXXSFDQLPLF 515
S D++P++
Sbjct: 175 AAAVEIVVTVLRFRAPGMSLDRMPIY 200
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 39.1 bits (87), Expect = 0.10
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1
Query: 628 PAGGGDPILYQHLF*FFGHPE 690
P GGG +L+QHLF FFGHPE
Sbjct: 270 PHGGGSALLWQHLFWFFGHPE 290
Score = 35.1 bits (77), Expect = 1.6
Identities = 41/184 (22%), Positives = 67/184 (36%), Gaps = 5/184 (2%)
Frame = +3
Query: 87 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 266
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 267 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS--NIAHRGRSVDLAIFSLHLA--GIS 431
F + +G +G T Y LS+ A G + ++ + +A I+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQTLWGISIAIFCIA 193
Query: 432 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 611
S S ++P+ A IT+ A +L DR
Sbjct: 194 SLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAG 253
Query: 612 TSFF 623
TSFF
Sbjct: 254 TSFF 257
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 38.7 bits (86), Expect = 0.13
Identities = 39/185 (21%), Positives = 64/185 (34%), Gaps = 4/185 (2%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
+L PG + + +N + T HA N +PL++GA D+AFPR+N
Sbjct: 57 QLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLNA 115
Query: 261 IRFXXXXXXXXXXXXXXIVENGAG----TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 428
+ ++ G G Y L+S G D L L GI
Sbjct: 116 FSYWIYLFGALFINAGWLMGTAGGHVPDIGWFGYANLTSVQFTSGLGPDFWTLGLLLLGI 175
Query: 429 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 608
+ + ++P+FV +T+ A+ +L+ DR
Sbjct: 176 GTLVSGFNFIVTILNMRAPGMTLMKMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTF 235
Query: 609 NTSFF 623
+FF
Sbjct: 236 AANFF 240
Score = 35.9 bits (79), Expect = 0.93
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 616 HFFDPAGGGDPILYQHLF*FFGHPE 690
+FF+ GG + YQHLF FGHPE
Sbjct: 238 NFFEVLRGGSVVFYQHLFWTFGHPE 262
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 37.1 bits (82), Expect = 0.40
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +3
Query: 381 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 560
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 561 XXXAGAITILLTDRNLNT 614
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_Q22LV7 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 761
Score = 35.9 bits (79), Expect = 0.93
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = -1
Query: 682 VQKIKINVDIKLGLLLQQDQKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN 503
+QK + +++ L L +QQ+Q+N + KF++ +NI I+ S+NNN N+ + NK N
Sbjct: 70 LQKHREELEL-LELQIQQEQRNGLNKFQNSSNINIS-----SNNNNFNSNNNNNNGNKNN 123
Query: 502 *SNDILFNR 476
N IL R
Sbjct: 124 DKNSILEER 132
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 498 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
DQ+ LF ++ IT AG IT+LL+DRN N FF
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFF 53
>UniRef50_Q4HP18 Cluster: Putative uncharacterized protein; n=1;
Campylobacter upsaliensis RM3195|Rep: Putative
uncharacterized protein - Campylobacter upsaliensis
RM3195
Length = 285
Score = 33.9 bits (74), Expect = 3.8
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -1
Query: 679 QKIKINVDIKLGLLLQQDQKNDVFKFRSVNNIVIAPAKTGSDNNN 545
++I+ ++DI G + D+K +VF ++ NI + PA + +N N
Sbjct: 241 KEIRESIDILAGFGIHYDEKKEVFYYQGNKNINVIPAVSKGENKN 285
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 33.1 bits (72), Expect = 6.6
Identities = 25/101 (24%), Positives = 34/101 (33%)
Frame = +3
Query: 123 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 302
YN ++T HA N +PL LG D+A PR+N
Sbjct: 74 YNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVV 133
Query: 303 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
G T Y PL+ + G SV + L+ G
Sbjct: 134 LGLFNGGAPSVGWTFYYPLTMDGNQTGVSVFMVAVILNGLG 174
Score = 32.7 bits (71), Expect = 8.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 622 FDPAGGGDPILYQHLF*FFGHP 687
F+P GG P+LYQ F F+ HP
Sbjct: 238 FNPGIGGVPVLYQQFFWFYSHP 259
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 8.7
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 601 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 479
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 32.7 bits (71), Expect = 8.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 5 YWNIIFYFWYLIRNNWNIFKTFNS 76
YWNI+F+FWYLI ++ K NS
Sbjct: 348 YWNIMFHFWYLISFISHLAKINNS 371
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,254,604
Number of Sequences: 1657284
Number of extensions: 8624472
Number of successful extensions: 22331
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 20307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22089
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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