Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30825
(703 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC098349-1|AAH98349.1| 83|Homo sapiens CDC42SE2 protein protein. 45 2e-04
BC096738-1|AAH96738.1| 84|Homo sapiens CDC42 small effector 2 ... 45 2e-04
BC096703-1|AAH96703.1| 84|Homo sapiens CDC42 small effector 2 ... 45 2e-04
AF189692-1|AAF87598.1| 84|Homo sapiens non-kinase Cdc42 effect... 45 2e-04
BC041604-1|AAH41604.1| 79|Homo sapiens CDC42 small effector 1 ... 37 0.061
BC012796-1|AAH12796.2| 79|Homo sapiens CDC42 small effector 1 ... 37 0.061
AL590133-24|CAI13349.1| 79|Homo sapiens CDC42 small effector 1... 37 0.061
AF286041-1|AAF97248.1| 77|Homo sapiens CDC42-binding protein S... 37 0.061
AF187845-1|AAF87597.1| 79|Homo sapiens small protein effector ... 37 0.061
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 31 5.3
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 31 5.3
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 31 5.3
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 30 7.0
>BC098349-1|AAH98349.1| 83|Homo sapiens CDC42SE2 protein protein.
Length = 83
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/53 (49%), Positives = 29/53 (54%)
Frame = +1
Query: 493 EIWLQWFACCYXXXXXXXXXXXXIDRSMIGAPTNFQHTGHIGSTDVDISGVAS 651
E WL F CC IDRSMIG PTNF HT H+GS D+ SG+ S
Sbjct: 2 EFWL-CFNCCIAEQPQPKRRRR-IDRSMIGEPTNFVHTAHVGSGDL-FSGMNS 51
>BC096738-1|AAH96738.1| 84|Homo sapiens CDC42 small effector 2
protein.
Length = 84
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/53 (49%), Positives = 29/53 (54%)
Frame = +1
Query: 493 EIWLQWFACCYXXXXXXXXXXXXIDRSMIGAPTNFQHTGHIGSTDVDISGVAS 651
E WL F CC IDRSMIG PTNF HT H+GS D+ SG+ S
Sbjct: 3 EFWL-CFNCCIAEQPQPKRRRR-IDRSMIGEPTNFVHTAHVGSGDL-FSGMNS 52
>BC096703-1|AAH96703.1| 84|Homo sapiens CDC42 small effector 2
protein.
Length = 84
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/53 (49%), Positives = 29/53 (54%)
Frame = +1
Query: 493 EIWLQWFACCYXXXXXXXXXXXXIDRSMIGAPTNFQHTGHIGSTDVDISGVAS 651
E WL F CC IDRSMIG PTNF HT H+GS D+ SG+ S
Sbjct: 3 EFWL-CFNCCIAEQPQPKRRRR-IDRSMIGEPTNFVHTAHVGSGDL-FSGMNS 52
>AF189692-1|AAF87598.1| 84|Homo sapiens non-kinase Cdc42 effector
protein SPEC2 protein.
Length = 84
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/53 (49%), Positives = 29/53 (54%)
Frame = +1
Query: 493 EIWLQWFACCYXXXXXXXXXXXXIDRSMIGAPTNFQHTGHIGSTDVDISGVAS 651
E WL F CC IDRSMIG PTNF HT H+GS D+ SG+ S
Sbjct: 3 EFWL-CFNCCIAEQPQPKRRRR-IDRSMIGEPTNFVHTAHVGSGDL-FSGMNS 52
>BC041604-1|AAH41604.1| 79|Homo sapiens CDC42 small effector 1
protein.
Length = 79
Score = 37.1 bits (82), Expect = 0.061
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 493 EIWLQWFACCYXXXXXXXXXXXXIDRSMIGAPTNFQHTGHIGSTDV 630
E W + CC IDR+MIG P NF H HIGS ++
Sbjct: 3 EFWHK-LGCCVVEKPQPKKKRRRIDRTMIGEPMNFVHLTHIGSGEM 47
>BC012796-1|AAH12796.2| 79|Homo sapiens CDC42 small effector 1
protein.
Length = 79
Score = 37.1 bits (82), Expect = 0.061
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 493 EIWLQWFACCYXXXXXXXXXXXXIDRSMIGAPTNFQHTGHIGSTDV 630
E W + CC IDR+MIG P NF H HIGS ++
Sbjct: 3 EFWHK-LGCCVVEKPQPKKKRRRIDRTMIGEPMNFVHLTHIGSGEM 47
>AL590133-24|CAI13349.1| 79|Homo sapiens CDC42 small effector 1
protein.
Length = 79
Score = 37.1 bits (82), Expect = 0.061
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 493 EIWLQWFACCYXXXXXXXXXXXXIDRSMIGAPTNFQHTGHIGSTDV 630
E W + CC IDR+MIG P NF H HIGS ++
Sbjct: 3 EFWHK-LGCCVVEKPQPKKKRRRIDRTMIGEPMNFVHLTHIGSGEM 47
>AF286041-1|AAF97248.1| 77|Homo sapiens CDC42-binding protein
SCIP1 protein.
Length = 77
Score = 37.1 bits (82), Expect = 0.061
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 493 EIWLQWFACCYXXXXXXXXXXXXIDRSMIGAPTNFQHTGHIGSTDV 630
E W + CC IDR+MIG P NF H HIGS ++
Sbjct: 1 EFWHK-LGCCVVEKPQPKKKRRRIDRTMIGEPMNFVHLTHIGSGEM 45
>AF187845-1|AAF87597.1| 79|Homo sapiens small protein effector 1
of Cdc42 protein.
Length = 79
Score = 37.1 bits (82), Expect = 0.061
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 493 EIWLQWFACCYXXXXXXXXXXXXIDRSMIGAPTNFQHTGHIGSTDV 630
E W + CC IDR+MIG P NF H HIGS ++
Sbjct: 3 EFWHK-LGCCVVEKPQPKKKRRRIDRTMIGEPMNFVHLTHIGSGEM 47
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 30.7 bits (66), Expect = 5.3
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 562 IDRSMIGAPTNFQHTGHIG 618
+ ++ IG P+NFQH GH+G
Sbjct: 198 LTKADIGTPSNFQHIGHVG 216
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 30.7 bits (66), Expect = 5.3
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 562 IDRSMIGAPTNFQHTGHIG 618
+ ++ IG P+NFQH GH+G
Sbjct: 198 LTKADIGTPSNFQHIGHVG 216
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 30.7 bits (66), Expect = 5.3
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 562 IDRSMIGAPTNFQHTGHIG 618
+ ++ IG P+NFQH GH+G
Sbjct: 198 LTKADIGTPSNFQHIGHVG 216
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 30.3 bits (65), Expect = 7.0
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 577 IGAPTNFQHTGHIG 618
IG P+NFQH GH+G
Sbjct: 203 IGTPSNFQHIGHVG 216
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,345,910
Number of Sequences: 237096
Number of extensions: 1682544
Number of successful extensions: 2845
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2845
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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