Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30825
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81114-2|CAB03286.1|  604|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U41272-4|AAA82448.2|  349|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z81533-1|CAB04334.1|  329|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U00050-3|AAL02480.1|  556|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U00050-2|AAL02479.1|  582|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U00050-1|AAA50697.1|  583|Caenorhabditis elegans Hypothetical pr...    28   7.4  

>Z81114-2|CAB03286.1|  604|Caenorhabditis elegans Hypothetical
           protein T04D3.2 protein.
          Length = 604

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 547 VAPEPRVGSSTRTTEAKFHRRYSPFCLLTSVLSVHLHTG 431
           + P   +    R TEA  + +YS  C  TS L + +H G
Sbjct: 118 LVPHKCLQCQARVTEADLYPKYSVVCNKTSTLVIFVHNG 156


>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical
           protein C06B8.7 protein.
          Length = 3118

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -1

Query: 184 HDCPDNRFFEHLILVN-KEHTL*VFATQFICKNTVMI 77
           H   DN FF HLI VN K  T    A   IC  TV +
Sbjct: 407 HRVDDNHFFPHLIAVNLKNRTYLDLAQPAICWMTVSL 443


>U41272-4|AAA82448.2|  349|Caenorhabditis elegans Hypothetical
           protein T03G11.3 protein.
          Length = 349

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +2

Query: 197 SVRDRASPSDVV*VDIKKLIHSQNKIQCVTGSPIDNIR 310
           S + RAS SD+   DIKK+ H +NK   V   P  N R
Sbjct: 55  SGKQRASGSDLTYADIKKVQHEKNKNGGVFPRPQTNWR 92


>Z81533-1|CAB04334.1|  329|Caenorhabditis elegans Hypothetical
           protein F36G9.2 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = -1

Query: 178 CPDNRFFEHLILVNKEHTL*VFAT--QFICKNTVMINTSNCFYTVNNSNTCLNLYTTVL 8
           CP N F     L   EH L VF+T         ++  T N   TV  S   L+L+T +L
Sbjct: 6   CPTNFFSSPTFLTTFEHFLTVFSTPVHIFGLYCIIYRTPNSMKTVKFSLINLHLWTILL 64


>U00050-3|AAL02480.1|  556|Caenorhabditis elegans Hypothetical
           protein F09F7.5c protein.
          Length = 556

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +1

Query: 562 IDRSMIGAPTNFQHTGHIG 618
           +D++MI  P++F+H  H+G
Sbjct: 17  LDKTMISLPSDFRHLAHVG 35


>U00050-2|AAL02479.1|  582|Caenorhabditis elegans Hypothetical
           protein F09F7.5b protein.
          Length = 582

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +1

Query: 562 IDRSMIGAPTNFQHTGHIG 618
           +D++MI  P++F+H  H+G
Sbjct: 17  LDKTMISLPSDFRHLAHVG 35


>U00050-1|AAA50697.1|  583|Caenorhabditis elegans Hypothetical
           protein F09F7.5a protein.
          Length = 583

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +1

Query: 562 IDRSMIGAPTNFQHTGHIG 618
           +D++MI  P++F+H  H+G
Sbjct: 17  LDKTMISLPSDFRHLAHVG 35


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,873,698
Number of Sequences: 27780
Number of extensions: 296608
Number of successful extensions: 744
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)