Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30821
(340 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical p... 30 0.49
Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical pr... 29 0.64
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ... 28 1.5
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ... 27 2.6
U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell l... 27 3.4
U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell l... 27 3.4
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 27 3.4
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z83232-4|CAB05756.2| 891|Caenorhabditis elegans Hypothetical pr... 27 4.5
U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical pr... 27 4.5
AC006761-8|AAF60552.2| 524|Caenorhabditis elegans Hypothetical ... 27 4.5
Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z75549-4|CAA99919.2| 304|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical pr... 26 7.9
U29377-3|AAA68720.2| 472|Caenorhabditis elegans Hypothetical pr... 26 7.9
AL110500-7|CAB54490.1| 489|Caenorhabditis elegans Hypothetical ... 26 7.9
AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B ... 26 7.9
AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical ... 26 7.9
>Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical
protein K10C8.3b protein.
Length = 141
Score = 29.9 bits (64), Expect = 0.49
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = -2
Query: 330 RAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPHH 154
R S+ ++ + +RP + R ++ P P R RS + + K + V P+H
Sbjct: 17 RKKSKSVKRCSSCKRPNSTRRSKTPDPNSEKEKVRNRSGSSSKKEKKNSLVNPNLQPNH 75
>Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical
protein C01F6.5 protein.
Length = 223
Score = 29.5 bits (63), Expect = 0.64
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -3
Query: 317 GTSGPPQRPGAQAQRETLGVRS 252
GT+GP +RP AQ +R++ G+R+
Sbjct: 38 GTAGPSRRPTAQPRRQSGGIRT 59
>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
protein Y47D3B.7 protein.
Length = 1113
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 313 HQDHHRGPAPRHSEKHSASEA-DRAERLLPGALRDAPSPE*TFSTCLVSTESTPFP 149
+ HH+ P P H H + + E++ ++ DAP T T LV +S P
Sbjct: 220 YSQHHQSPPPHHHHHHPMPKIHENPEQVASPSIEDAPE---TKPTHLVEPQSPKSP 272
>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
protein Y32B12B.4 protein.
Length = 1528
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 301 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE 197
H GP E+H +E D E LL G L D P +
Sbjct: 258 HSGPVAMKMEEHEETEEDFLE-LLNGTLDDVPDSD 291
>U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform a protein.
Length = 297
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 338 GGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS 243
GGA P +GT+ PP P + L +R Q+
Sbjct: 266 GGASPTSGTNSPPVFPKTSSSSSLLMLRDSQN 297
>U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform b protein.
Length = 597
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 338 GGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS 243
GGA P +GT+ PP P + L +R Q+
Sbjct: 566 GGASPTSGTNSPPVFPKTSSSSSLLMLRDSQN 597
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -3
Query: 338 GGAEP*AGTSGPPQRPGAQAQ 276
GG P G SGPP RPGA Q
Sbjct: 205 GGDAP-PGPSGPPGRPGAPGQ 224
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 306 TTTEARRPGTARNTRRPKPTELSVCCRERSETP 208
TTT +RP T T P+P E +E++E P
Sbjct: 163 TTTTTKRPPTTTTTEDPQPFEFHE-LQEQAENP 194
>Z83232-4|CAB05756.2| 891|Caenorhabditis elegans Hypothetical
protein K04B12.3 protein.
Length = 891
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -2
Query: 309 RTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSR 184
R T A+RPG R R K +E V R + E KP +
Sbjct: 352 RLYTNAQRPGERRGADRFKDSEKPVKIRSKEEHLMRVEKPKK 393
>U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical
protein ZC13.3 protein.
Length = 732
Score = 26.6 bits (56), Expect = 4.5
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 288 RPGTARNTRRPKPTEL 241
RP T + T++PKPTE+
Sbjct: 189 RPWTVKQTKKPKPTEV 204
>AC006761-8|AAF60552.2| 524|Caenorhabditis elegans Hypothetical
protein Y41G9A.6 protein.
Length = 524
Score = 26.6 bits (56), Expect = 4.5
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 306 TTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPHHF 151
T+TE P + RP T+L+V ++TP H N+P P ++ SP F
Sbjct: 263 TSTETSSPFFLDQSVRP--TQLAVASSFPAQTPLH-NEPLPPPVTQNSPSIF 311
>Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical
protein R11G10.1b protein.
Length = 478
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 313 HQDHHRGPAPRHSEKHSASEADRAE 239
H H R + HS KH+AS +D E
Sbjct: 19 HAYHSRPKSEEHSPKHAASSSDLFE 43
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical
protein F54F3.1 protein.
Length = 1584
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 337 AVQSREQGHQDHHRGPAPRHSEKHS 263
A Q++EQ HQ HH+ P+ + S
Sbjct: 326 ARQAQEQHHQQHHQPDQPQQQPQRS 350
>Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical
protein T09E8.1d protein.
Length = 547
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = -1
Query: 331 QSREQGHQDHHRGPAPRH-SEKHSASE 254
Q+ H HH PAPRH S H E
Sbjct: 31 QNGNSHHHHHHLPPAPRHLSSSHHQIE 57
>Z75549-4|CAA99919.2| 304|Caenorhabditis elegans Hypothetical
protein T19C4.4 protein.
Length = 304
Score = 25.8 bits (54), Expect = 7.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 78 LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAP 227
+R++ +T L+Q + S+ +YYN N +V S DG SL P
Sbjct: 218 IRIAFITCLVQACGTALSVIRYYNMNTSMAVTLANFIPFIS-DGLSLVQP 266
>Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical
protein F54C8.2 protein.
Length = 261
Score = 25.8 bits (54), Expect = 7.9
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 171 ETKQVEKVYSGDGASLSAPGSKRSALSASDAECF-SLCL 284
E + V DG+SL + SKR+ L+ +D + + LCL
Sbjct: 220 EASEALLVQMFDGSSLISAHSKRATLTTTDVQLYRRLCL 258
>U29377-3|AAA68720.2| 472|Caenorhabditis elegans Hypothetical
protein K05F1.5 protein.
Length = 472
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -2
Query: 234 CCRERSETPRHRNKPSRPVWSRRSPHHFHCSI 139
CC S P+ + SRP + HFHC I
Sbjct: 97 CCPITS-LPKRLDSCSRPFCKLKKKAHFHCKI 127
>AL110500-7|CAB54490.1| 489|Caenorhabditis elegans Hypothetical
protein Y87G2A.7 protein.
Length = 489
Score = 25.8 bits (54), Expect = 7.9
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 78 LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPG 230
++LS+ L QQ+ S+ + Y ++ V KQ+ ++ GA PG
Sbjct: 419 IKLSEQLYLDQQIKLICSLCQLYPVKMINKVAIKQLLELVVFAGADFEMPG 469
>AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B
protein protein.
Length = 478
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 313 HQDHHRGPAPRHSEKHSASEADRAE 239
H H R + HS KH+AS +D E
Sbjct: 19 HAYHSRPKSEEHSPKHAASSSDLFE 43
>AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical
protein F52F10.4 protein.
Length = 692
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2
Query: 114 IVVLTSSSWRDVIKP 70
I+ TS++W+DVIKP
Sbjct: 15 IIPTTSATWKDVIKP 29
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,137,132
Number of Sequences: 27780
Number of extensions: 161727
Number of successful extensions: 832
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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