Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30818
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical pr... 69 2e-12
U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical pr... 39 0.003
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am... 33 0.22
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am... 33 0.22
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 33 0.22
U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical p... 30 1.2
U40952-12|AAA81745.1| 297|Caenorhabditis elegans Hypothetical p... 28 4.8
AC024777-3|AAF60562.3| 563|Caenorhabditis elegans Hypothetical ... 28 4.8
Z81067-4|CAB02976.2| 632|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 27 8.3
>Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical
protein C31C9.2 protein.
Length = 322
Score = 69.3 bits (162), Expect = 2e-12
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
Frame = +1
Query: 172 REEILKLIPGCSALVWISNLPITNEILDAAGTQLKIVSTVSAGYNHCNPEELRARGIQLT 351
++E+L +P A++ S IT E+L A+ +LK+V G ++ + A I +
Sbjct: 37 KDELLVTLPQHDAVIVRSATKITAELLAASAGKLKLVGRAGTGVDNIDVPAASANKILVM 96
Query: 352 NTPNVLSPAVAEVAVGLLLSASRRFTENLDQVRRGEWEIGFDKVLGQDLRDSTVGIIGLG 531
NTP S + AE+ L+LS SR + ++ G+W +G+++ T+ ++GLG
Sbjct: 97 NTPQANSRSAAELTCTLILSLSRHVPQAAASMKAGKW--ARKDFMGEEVYGRTLAVLGLG 154
Query: 532 GIGQAVVKRLS--GFDVARFIYSGHREKPEAK 621
IG V RL G V F +E+ EAK
Sbjct: 155 RIGSEVAVRLQAFGMKVIGFDPMVTKEQAEAK 186
>U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical
protein F49E10.5 protein.
Length = 727
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 5/124 (4%)
Frame = +1
Query: 271 LKIVSTVSAGYNHCNPEELRARGIQLTNTPNVLSPAVAEVAVGLLLSASRRFTENLDQVR 450
LK+V + G ++ + + GI + + P VA+ + L+L RR +
Sbjct: 243 LKVVFRIGYGIDNIDVKAATELGIAVCHAPGDYVEDVADSTLSLILDLFRRTYWHAKSYS 302
Query: 451 RGEWEIGFDKVL-----GQDLRDSTVGIIGLGGIGQAVVKRLSGFDVARFIYSGHREKPE 615
IG D+V + +R S +GI+G G +G AV R F + Y +
Sbjct: 303 ETRKTIGADQVRENAVGSKKVRGSVLGILGCGRVGTAVGLRARAFGLHIIFYDPFVREGH 362
Query: 616 AKAL 627
KAL
Sbjct: 363 DKAL 366
>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform a protein.
Length = 1212
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 600 VSRVNKPGDIKTTKTFDDSLSNTTQADDPYGAVA-EVLP*DLVETDLPFSPAY 445
VSR ++ G T+ FDD L+ + D P + A + P DL ET P SP Y
Sbjct: 551 VSRPDELGLPTTSIQFDDRLTVIVEEDTPSDSPAPDASPRDLPETPTPTSPIY 603
>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform b protein.
Length = 1454
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 600 VSRVNKPGDIKTTKTFDDSLSNTTQADDPYGAVA-EVLP*DLVETDLPFSPAY 445
VSR ++ G T+ FDD L+ + D P + A + P DL ET P SP Y
Sbjct: 551 VSRPDELGLPTTSIQFDDRLTVIVEEDTPSDSPAPDASPRDLPETPTPTSPIY 603
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 32.7 bits (71), Expect = 0.22
Identities = 29/122 (23%), Positives = 47/122 (38%)
Frame = -2
Query: 578 ATSKPLRRLTTACPIPPKPMIPTVLSRRSCPRTLSKPISHSPLRT*SRFSVNLLEADSRS 399
ATS +TT+ PP + T ++ + T++ S P T + + S
Sbjct: 147 ATSTSTTSITTSTLSPPSTVQSTTTAKPTTTSTITPTTSADPTST---ITTSTTPNPSSP 203
Query: 398 PTATSATAGDRTFGVFVSCIPRARNSSGLQWL*PAETVLTIFSCVPAASRISFVIGRLEI 219
T S T + T + + +P + +S +Q AE TI S S S + L
Sbjct: 204 STVQSTTTAEPTSTITSTTVPESSTTSVVQSTTTAEPTSTITSTTVPESSTSLLTSTLAS 263
Query: 218 QT 213
T
Sbjct: 264 TT 265
>U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical
protein T03F1.1 protein.
Length = 419
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +1
Query: 496 LRDSTVGIIGLGGIGQAVVKRLSGFDVARFI 588
+R+ TV ++G+GG+G V + L+ + + I
Sbjct: 82 IREKTVAVVGVGGVGSVVAEMLTRCGIGKLI 112
>U40952-12|AAA81745.1| 297|Caenorhabditis elegans Hypothetical
protein C03B1.1 protein.
Length = 297
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 106 EDHFTVLQSRYLNFGQEGSTLGREEILKLIPGCSALVWISNL 231
ED +TV + N G + STL ++I + C A ++N+
Sbjct: 190 EDQYTVFDQLFDNLGSDASTLMEQQIELMRNYCQAKAELTNM 231
>AC024777-3|AAF60562.3| 563|Caenorhabditis elegans Hypothetical
protein Y42H9AR.3 protein.
Length = 563
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/53 (26%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +1
Query: 244 EILDAAGTQLKIVSTVSAG---YNHCNPEELRARGIQLTNTPNVLSPAVAEVA 393
E+ + T +++V+++ G Y+H + EELR++ +++ + + +S +AE A
Sbjct: 344 EVKNLVPTYVRVVTSLKNGESVYSHKHGEELRSKCLEIQKSIDYVSKKIAEGA 396
>Z81067-4|CAB02976.2| 632|Caenorhabditis elegans Hypothetical
protein F23A7.5 protein.
Length = 632
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 429 RESGSSTQGRMGDRFRQGPRARPPRQHRRDHRLG 530
R S G G R R RAR R+HR D + G
Sbjct: 593 RRHSRSRSGSRGSRRRSDRRARHERRHRDDDKSG 626
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 415 SRRFTENLDQV---RRGEWEIGFDKVLGQDLRDSTVGIIGLGGIGQAVV 552
SRR+ E + V R+G W+ DKV+G + + G + G +++
Sbjct: 256 SRRYVEPITYVPVTRKGYWQFKMDKVVGSGVLGCSNGCQAIADTGTSLI 304
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -2
Query: 563 LRRLTTACPIPPKPMIPTVLSRRSCP--RTLSKPISHSPLRT*SRFSVNLLEADSRSPTA 390
+R P+ P P+ P S T S SH P+ +S ++ DSRSP+A
Sbjct: 4093 MRNTRVLVPVVPPPLPPRGFRNDSSNFISTSSVTTSHRPMVQVKPYSSDI--RDSRSPSA 4150
Query: 389 TSATAGDR 366
++ G R
Sbjct: 4151 CGSSKGTR 4158
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -2
Query: 563 LRRLTTACPIPPKPMIPTVLSRRSCP--RTLSKPISHSPLRT*SRFSVNLLEADSRSPTA 390
+R P+ P P+ P S T S SH P+ +S ++ DSRSP+A
Sbjct: 4093 MRNTRVLVPVVPPPLPPRGFRNDSSNFISTSSVTTSHRPMVQVKPYSSDI--RDSRSPSA 4150
Query: 389 TSATAGDR 366
++ G R
Sbjct: 4151 CGSSKGTR 4158
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -2
Query: 563 LRRLTTACPIPPKPMIPTVLSRRSCP--RTLSKPISHSPLRT*SRFSVNLLEADSRSPTA 390
+R P+ P P+ P S T S SH P+ +S ++ DSRSP+A
Sbjct: 4093 MRNTRVLVPVVPPPLPPRGFRNDSSNFISTSSVTTSHRPMVQVKPYSSDI--RDSRSPSA 4150
Query: 389 TSATAGDR 366
++ G R
Sbjct: 4151 CGSSKGTR 4158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,086,621
Number of Sequences: 27780
Number of extensions: 282043
Number of successful extensions: 886
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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