Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30818
(627 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.4
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 23 2.4
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 3.2
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 21 7.4
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 7.4
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 9.8
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.8
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.8
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.8
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.8
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 1.4
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +1
Query: 442 QVRRGEWEIGFDKVLGQDLRDSTVGIIGL 528
++ +G WE D+VL + + G+ L
Sbjct: 914 KISKGSWETDIDRVLVPGSQQNVAGVFNL 942
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 496 GLALGPCRNRSPIL 455
GLALGP RN IL
Sbjct: 250 GLALGPIRNNDRIL 263
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 332 RGVYS*R-TPRTSCPRPLQRLPWDSYCRPLE 421
R +YS R T + CP L+ P D+ PL+
Sbjct: 117 RVLYSSRLTIKAGCPMNLENFPMDTQRCPLQ 147
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 60 ISFIQRLPADRAE 98
++F QR+PA RAE
Sbjct: 95 LTFFQRIPAYRAE 107
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 7.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 499 RDSTVGIIGLGGIGQAVVKRLSGFDVARF 585
R +G I G I + + SG+ VARF
Sbjct: 381 RKPNLGDIKPGSIIENIAHTRSGYSVARF 409
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2
Query: 533 PPKPMIPTVLS 501
PP+P +PTV S
Sbjct: 180 PPEPPVPTVTS 190
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 533 PPKPMIPTVLSRRSCPR 483
PP+PM P V + PR
Sbjct: 125 PPRPMGPFVSMQEQIPR 141
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 533 PPKPMIPTVLSRRSCPR 483
PP+PM P V + PR
Sbjct: 125 PPRPMGPFVSMQEQIPR 141
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 533 PPKPMIPTVLSRRSCPR 483
PP+PM P V + PR
Sbjct: 125 PPRPMGPFVSMQEQIPR 141
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 533 PPKPMIPTVLSRRSCPR 483
PP+PM P V + PR
Sbjct: 125 PPRPMGPFVSMQEQIPR 141
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 407 CRPLEGSPRIWIKYAGENGRSVSTRS 484
C + R W K GE R+ STR+
Sbjct: 1335 CNAVGDPTREWYKGQGEQIRTDSTRN 1360
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 407 CRPLEGSPRIWIKYAGENGRSVSTRS 484
C + R W K GE R+ STR+
Sbjct: 1331 CNAVGDPTREWYKGQGEQIRTDSTRN 1356
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,878
Number of Sequences: 438
Number of extensions: 3353
Number of successful extensions: 48
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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