Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30817
         (733 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6MD96 Cluster: Putative uncharacterized protein; n=2; ...    33   5.5  
UniRef50_Q8IBH9 Cluster: Cation-transporting ATPase; n=2; Plasmo...    33   5.5  
UniRef50_Q15TY4 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_A0BQ80 Cluster: Chromosome undetermined scaffold_12, wh...    33   7.2  
UniRef50_A4AJA9 Cluster: Enoyl CoA hydratase; n=1; marine actino...    33   9.5  
UniRef50_P53453 Cluster: D(2)-like dopamine receptor; n=9; Eutel...    33   9.5  

>UniRef50_Q6MD96 Cluster: Putative uncharacterized protein; n=2;
           Candidatus Protochlamydia amoebophila UWE25|Rep:
           Putative uncharacterized protein - Protochlamydia
           amoebophila (strain UWE25)
          Length = 915

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
 Frame = +3

Query: 177 SKMTVFKNNSQFIF----KIVKVYSLRSFMLMKSI-LS*IDV*IFKMSMKL*IWDRKYVI 341
           SK+  F +NSQFIF    K + +  L++F+  K + LS  D+  F     +  W   Y +
Sbjct: 496 SKILGFISNSQFIFRPKIKQISITPLKTFVGKKELPLSIHDMYFFTNEQTISAWHYAYDL 555

Query: 342 FYSSNAFHF 368
            YSS  F F
Sbjct: 556 HYSSEDFFF 564


>UniRef50_Q8IBH9 Cluster: Cation-transporting ATPase; n=2;
            Plasmodium|Rep: Cation-transporting ATPase - Plasmodium
            falciparum (isolate 3D7)
          Length = 1918

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +1

Query: 397  IYLYAI-YFWLIIVLASVHPFFNYTF-*IQF-RLSFK*NSFFIVRI-IYNPPITSNISPY 564
            +Y++A+ +F+L +++  + PF NY F  + F  + FK   FF++ + I+ P + +N+   
Sbjct: 1846 VYIFAVNFFFLFVLVMDIFPFLNYFFSLVSFPNIRFKFFFFFLMLVDIFLPYLVTNLFKS 1905

Query: 565  LFF 573
            L F
Sbjct: 1906 LRF 1908


>UniRef50_Q15TY4 Cluster: Putative uncharacterized protein; n=1;
           Pseudoalteromonas atlantica T6c|Rep: Putative
           uncharacterized protein - Pseudoalteromonas atlantica
           (strain T6c / BAA-1087)
          Length = 863

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = +2

Query: 206 TVYIQNCKSIFITLIYADEKHIILNRCLNFQDVNETLNLG-QEIC 337
           T + +N  SIF    YA ++HI +N CL+F D++  LN+  +E+C
Sbjct: 27  TYFFRNAISIFFIEHYARDQHITVN-CLSF-DIDSQLNIELEELC 69


>UniRef50_A0BQ80 Cluster: Chromosome undetermined scaffold_12, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_12,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 455

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
 Frame = +2

Query: 173 KFKDDRFQK*FTVYIQNCKSIFITLIYADEKHIILNRCLNFQDVNETLNLGQEI--CDLL 346
           +FKDD  +   +++++NCK+  I L+ A  K I L +C   + V +    G ++  C  +
Sbjct: 316 EFKDDEIEMKQSLFVENCKNCGI-LVKAKVKSIFLQKCERVELVFDQTISGVDVVNCKKV 374

Query: 347 QQQCL---PFLNIRRVDSFQFIF 406
           +  CL   P L I   +S    F
Sbjct: 375 KVTCLTKCPSLMINNSESVFMAF 397


>UniRef50_A4AJA9 Cluster: Enoyl CoA hydratase; n=1; marine
           actinobacterium PHSC20C1|Rep: Enoyl CoA hydratase -
           marine actinobacterium PHSC20C1
          Length = 275

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -2

Query: 192 KRSSLNFSLVVPRISSFTFLCSNPKGTDSIQSISASNLP 76
           KR+SLN S++   I  F  L S  +GTDS+ ++  +  P
Sbjct: 38  KRNSLNRSMIEALIDIFAALASGAEGTDSVSAVVLAGSP 76


>UniRef50_P53453 Cluster: D(2)-like dopamine receptor; n=9;
           Euteleostomi|Rep: D(2)-like dopamine receptor - Fugu
           rubripes (Japanese pufferfish) (Takifugu rubripes)
          Length = 463

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +1

Query: 373 HSSRGLIPIYLYAIYFWLIIVLASVHPFFNYTF*IQFRLSF 495
           H +R  +P  +Y  + WL  V ++V+P    TF ++FR +F
Sbjct: 417 HCTRCKVPAEMYNAFTWLGYVNSAVNPIIYTTFNVEFRKAF 457


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,171,370
Number of Sequences: 1657284
Number of extensions: 13914506
Number of successful extensions: 32859
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32852
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)