Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30817
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    26   0.27 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    26   0.27 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.9  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   1.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   2.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   5.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.9  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 385 GLIPIYLYAIYFWLIIVLASVHPFFNYTF*IQFRLSFK*NSFFIVRII 528
           G   IYL ++Y W I+   +     + T  ++F LSF+  SF  + ++
Sbjct: 40  GTTCIYLTSLYIWFILTQMTFSGVTSPTI-MKFVLSFRTGSFTFLMVV 86


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 385 GLIPIYLYAIYFWLIIVLASVHPFFNYTF*IQFRLSFK*NSFFIVRII 528
           G   IYL ++Y W I+   +     + T  ++F LSF+  SF  + ++
Sbjct: 40  GTTCIYLTSLYIWFILTQMTFSGVTSPTI-MKFVLSFRTGSFTFLMVV 86


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 606 IRNFYLHSTGLKEQVRRYVACDWRIVNNT 520
           IRN  L S  L  Q   + AC + ++N T
Sbjct: 327 IRNINLFSLQLAHQKLEFSACGFFLINGT 355


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 606 IRNFYLHSTGLKEQVRRYVACDWRIVNNT 520
           IRN  L S  L  Q   + AC + ++N T
Sbjct: 152 IRNINLFSLQLAHQKLEFSACGFFLINGT 180


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = -2

Query: 366 NGRHCCCKRSHISC--PKFRVS 307
           NG  CCC R+  S   PKF  S
Sbjct: 186 NGNKCCCLRTCSSAKRPKFENS 207


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 731  SATNIFKVFLSDSWTVLACTLCERLTCIPWVFIYLIFLSVLEL 603
            S + IF + ++ S+ + AC   +   CI    IYL+ +  + L
Sbjct: 1002 SPSAIFLIAMTGSFFIAACLHPQEFWCIVPGIIYLLSIPSMYL 1044


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 731  SATNIFKVFLSDSWTVLACTLCERLTCIPWVFIYLIFLSVLEL 603
            S + IF + ++ S+ + AC   +   CI    IYL+ +  + L
Sbjct: 1002 SPSAIFLIAMTGSFFIAACLHPQEFWCIVPGIIYLLSIPSMYL 1044


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 731  SATNIFKVFLSDSWTVLACTLCERLTCIPWVFIYLIFLSVLEL 603
            S + IF + ++ S+ + AC   +   CI    IYL+ +  + L
Sbjct: 1002 SPSAIFLIAMTGSFFIAACLHPQEFWCIVPGIIYLLSIPSMYL 1044


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 731  SATNIFKVFLSDSWTVLACTLCERLTCIPWVFIYLIFLSVLEL 603
            S + IF + ++ S+ + AC   +   CI    IYL+ +  + L
Sbjct: 1002 SPSAIFLIAMTGSFFIAACLHPQEFWCIVPGIIYLLSIPSMYL 1044


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = -2

Query: 432 YY*PKVYRVKINWNESTRRMFKNGRHCCCKRSHIS 328
           Y   K+ ++KIN+N   +   +NG+    ++  +S
Sbjct: 181 YQNEKITKLKINYNPFAKGFRENGKSSAKRKQLVS 215


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 540 WRIVNNTHNKKTILFKTQPE 481
           WR++NN   +   +FKT+ +
Sbjct: 104 WRLLNNNFQQIDKIFKTRDD 123


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/33 (21%), Positives = 19/33 (57%)
 Frame = +2

Query: 491 VLNRIVFLLCVLFTIRQSQATYRLTCSFNPVLC 589
           ++ +++F++CVL    +    + +  SF  ++C
Sbjct: 254 IITQVIFVICVLVQSEKIVWLHLVYISFLGIIC 286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,703
Number of Sequences: 336
Number of extensions: 3881
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)