Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30817
         (733 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g28050.1 68417.m04024 senescence-associated protein, putative...    29   2.4  
At3g53400.1 68416.m05893 expressed protein                             29   3.2  
At3g49790.1 68416.m05444 expressed protein predicted protein, Ar...    28   5.6  
At3g07980.1 68416.m00975 protein kinase, putative similar to MAP...    28   7.3  
At3g13530.1 68416.m01701 MAP3K epsilon protein kinase identical ...    27   9.7  

>At4g28050.1 68417.m04024 senescence-associated protein, putative
           similar to senescence-associated protein 5 [Hemerocallis
           hybrid cultivar] gi|3551954|gb|AAC34855
          Length = 263

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/37 (37%), Positives = 26/37 (70%)
 Frame = -3

Query: 719 IFKVFLSDSWTVLACTLCERLTCIPWVFIYLIFLSVL 609
           IF +F+S +  V AC  C R++C+ W++++ +FL +L
Sbjct: 51  IFLMFVSIAGLVGAC--C-RVSCLLWLYLFAMFLLIL 84


>At3g53400.1 68416.m05893 expressed protein
          Length = 466

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 1   TTYRQCVGISKLCRNSGFSIHQ 66
           T Y  C GI K  RNSG  +HQ
Sbjct: 441 TGYSDCTGIIKSLRNSGVFVHQ 462


>At3g49790.1 68416.m05444 expressed protein predicted protein,
           Arabidopsis thaliana
          Length = 366

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 224 CKSIFITLIYADEKHIILNRCLNFQDVNETLNLG 325
           C S   T + A  K + LNR  + QD ++TL +G
Sbjct: 235 CNSAVETFVRASRKPVQLNRSSSCQDSSQTLTVG 268


>At3g07980.1 68416.m00975 protein kinase, putative similar to MAP3K
           epsilon protein kinase [Arabidopsis thaliana]
           gi|3549652|emb|CAA12272
          Length = 1367

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 701 SDSWTVLACTLCERLTCIP 645
           SD W+V  CT+ E LTC+P
Sbjct: 200 SDIWSV-GCTIIELLTCVP 217


>At3g13530.1 68416.m01701 MAP3K epsilon protein kinase identical to
           MAP3K epsilon protein kinase [Arabidopsis thaliana]
           gi|3549652|emb|CAA12272
          Length = 1368

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 701 SDSWTVLACTLCERLTCIP 645
           SD W+V  CT+ E LTC+P
Sbjct: 200 SDIWSV-GCTVIELLTCVP 217


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,251,059
Number of Sequences: 28952
Number of extensions: 306034
Number of successful extensions: 710
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)