Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30816
         (707 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IJ27 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_Q22MP8 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  

>UniRef50_Q8IJ27 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 980

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
 Frame = -3

Query: 420 FDCSVLIFHCEINSQLLAKY*Y**AQKSNHINRVTSRFSSFQNILLNY--FQSNVNSFPN 247
           F+C +LI    + + LL+ Y     +  N IN   + +    N  LN+  FQ+  N   N
Sbjct: 9   FECDILICGTSLLNTLLSVYFS--IKNYNVINIDKNNYYGDYNGSLNFCQFQNEHNELEN 66

Query: 246 FHKEFVTFKSLTR 208
           F+ EF+ F +LT+
Sbjct: 67  FYYEFLPFSNLTQ 79


>UniRef50_Q22MP8 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 763

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 22  LARSIETFDRSQ-FEQSFLKFNLNGNHSNTLAQLVNHLTVSSN 147
           L RS+  FD  Q F Q  L  NLN  H + L Q+ NHL + SN
Sbjct: 556 LNRSVNYFDNRQIFNQDILHQNLN--HHDQLNQIQNHLKLDSN 596


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,504,264
Number of Sequences: 1657284
Number of extensions: 11267264
Number of successful extensions: 24312
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24303
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)