BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30812 (760 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 34 4.4 UniRef50_O83942 Cluster: UPF0135 protein TP_0977; n=1; Treponema... 33 7.7 >UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia theta|Rep: 40S ribosomal protein S24 - Guillardia theta (Cryptomonas phi) Length = 129 Score = 33.9 bits (74), Expect = 4.4 Identities = 20/57 (35%), Positives = 31/57 (54%) Frame = -3 Query: 671 IMLFGLKNNFNKIKTFTSCLACIYVLVSIGSSAHVEKPLHRITSFKTNFISPKISVS 501 I +FGLKNNF K C A +Y+ ++ +A V +P HR+ K N + ++ S Sbjct: 59 IFIFGLKNNFGGFK----CSAFVYIYYNL-EAARVNEPKHRL--IKNNLMKLELQSS 108 >UniRef50_O83942 Cluster: UPF0135 protein TP_0977; n=1; Treponema pallidum|Rep: UPF0135 protein TP_0977 - Treponema pallidum Length = 286 Score = 33.1 bits (72), Expect = 7.7 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = +2 Query: 23 ALKLDLNPLFVDGQQN*TCKTCANEHTARLMVSGHHQSRT 142 A+ LDL+ LF+ G+ +C A EH+ ++ GH+Q+ T Sbjct: 221 AIALDLD-LFITGEIEHSCYHTAREHSISVIAGGHYQTET 259 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 695,144,493 Number of Sequences: 1657284 Number of extensions: 12726472 Number of successful extensions: 28772 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 27769 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 28753 length of database: 575,637,011 effective HSP length: 99 effective length of database: 411,565,895 effective search space used: 62969581935 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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