Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30812
         (760 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66496-4|CAC42280.2|  177|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AF002196-7|AAB53977.1|  254|Caenorhabditis elegans Hypothetical ...    31   1.2  
Z79602-2|CAB01889.1|  380|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AL110490-10|CAB54446.1|  430|Caenorhabditis elegans Hypothetical...    28   8.3  

>Z66496-4|CAC42280.2|  177|Caenorhabditis elegans Hypothetical
           protein E04D5.1b protein.
          Length = 177

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = -1

Query: 721 YCFN-VMPATPMASTLCILCFSV*RTILIK*KLSHHALHAFMFWFLLGPART-*RSHFTE 548
           YC N V     +A+   ILC  + RT  I      + L  F  W + GP RT  ++   E
Sbjct: 54  YCDNQVTRVFEIATNKEILCVELKRTRKILFSPKDNFLLTFEPWAVYGPKRTKSQNQMCE 113

Query: 547 SQVLKQTSSVQR 512
           S VL+  S+ QR
Sbjct: 114 STVLRMESTYQR 125


>AF002196-7|AAB53977.1|  254|Caenorhabditis elegans Hypothetical
           protein C09D4.2 protein.
          Length = 254

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/37 (29%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +3

Query: 432 KYEHILCINST*NSHAVVRDVSLG-DGYLWTDEVCFK 539
           ++ H +C+N+T N  ++  D+S+G DG+ +++E+  +
Sbjct: 155 EFRHSVCVNATYNPVSIGLDLSIGVDGHYFSEEISLR 191


>Z79602-2|CAB01889.1|  380|Caenorhabditis elegans Hypothetical
           protein K09E9.2 protein.
          Length = 380

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +3

Query: 480 VVRDVSLGDGY-LWTDEVCFKTCDSVKWLLYVRAGPNRNQNINACK 614
           V+++V  G  Y    D +C  TCD VK    V+      + +  CK
Sbjct: 137 VIQEVKCGSCYGAAADGICCNTCDDVKSAYAVKGWQVNIEEVEQCK 182


>AL110490-10|CAB54446.1|  430|Caenorhabditis elegans Hypothetical
           protein Y48B6A.10 protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -1

Query: 337 QFLLLYYFISCTCI 296
           QF +L+YFISC C+
Sbjct: 27  QFSVLFYFISCVCV 40


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,538,507
Number of Sequences: 27780
Number of extensions: 329269
Number of successful extensions: 800
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)