BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30811 (431 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC18.14c |rpp0||60S acidic ribosomal protein Rpp0 |Schizosacch... 136 1e-33 SPBC11G11.03 |||60S acidic ribosomal protein |Schizosaccharomyce... 54 1e-08 SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 29 0.31 SPAC823.13c |||mitochondrial inner membrane protein|Schizosaccha... 27 0.93 SPAC3H1.04c |mdm31||mitochondrial inner membrane protein Mdm31|S... 27 0.93 SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 1.6 SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 26 2.2 SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomy... 25 3.8 SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces pomb... 25 3.8 SPAC23D3.10c |eng2||endo-1,3-beta-glucanase Eng2|Schizosaccharom... 24 8.7 SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 24 8.7 SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 24 8.7 SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 24 8.7 SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos... 24 8.7 >SPCC18.14c |rpp0||60S acidic ribosomal protein Rpp0 |Schizosaccharomyces pombe|chr 3|||Manual Length = 312 Score = 136 bits (330), Expect = 1e-33 Identities = 62/119 (52%), Positives = 87/119 (73%) Frame = +1 Query: 73 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 252 K+ YF K+ L ++Y F+V DNV SQQM +R LRG++ ++MGKNTM+R+A++ + Sbjct: 8 KAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRRAMRGII 67 Query: 253 DNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 429 ++ P LE+LLP ++GNVGFVFT DL EVR+ ++ N + APARP AIAPL V +PA NT Sbjct: 68 NDMPELERLLPVVRGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDVFVPAGNT 126 >SPBC11G11.03 |||60S acidic ribosomal protein |Schizosaccharomyces pombe|chr 2|||Manual Length = 241 Score = 53.6 bits (123), Expect = 1e-08 Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 6/143 (4%) Frame = +1 Query: 10 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 189 K RS TL++ ++ K+ F + Q LD + +I N+ + +++IR + Sbjct: 3 KSRRSKVLTLAQTEKKGHEG-KAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWK 61 Query: 190 GSSIVLMGKNTMMRKAI-----KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLL 354 GS I MGK +M KA+ ++H +N L KLL G VG +FT EV Sbjct: 62 GSRI-FMGKTKVMAKALGHTPEEEHAENVSKLTKLL---HGAVGLLFTNSKPDEVIG-YF 116 Query: 355 ENKVQAP-ARPGAIAPLSVVIPA 420 E+ VQ AR GA+AP + VIPA Sbjct: 117 ESFVQNDFARAGAVAPFTHVIPA 139 >SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 297 Score = 29.1 bits (62), Expect = 0.31 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = +2 Query: 203 CSWEKTL*CAKPSKTTWTTIQPSRNCCHTSRATLAS 310 CS EKT C++ K+ T+ +PS CC ++T+ + Sbjct: 264 CSTEKTSCCSQEKKSCCTSEKPS--CCSNGKSTVCA 297 >SPAC823.13c |||mitochondrial inner membrane protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 317 Score = 27.5 bits (58), Expect = 0.93 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -1 Query: 269 RAGLLSRWSLMALRIIVFFPMSTILEPR 186 +A W LM + +++F + ILEPR Sbjct: 162 QASTWGTWGLMGINVVLFVVVQLILEPR 189 >SPAC3H1.04c |mdm31||mitochondrial inner membrane protein Mdm31|Schizosaccharomyces pombe|chr 1|||Manual Length = 601 Score = 27.5 bits (58), Expect = 0.93 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = -1 Query: 347 LSRTSTRSPRVNTKPTLPLMCGNSFSRAGLLSRWSLMALRII 222 L +T +S + PTLP + + S +G+LSR + + ++ I Sbjct: 35 LKQTVLQSSSFKSFPTLPRLAARNISNSGILSRTTPVIIKQI 76 >SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 800 Score = 26.6 bits (56), Expect = 1.6 Identities = 25/97 (25%), Positives = 42/97 (43%) Frame = +2 Query: 140 PITWARNRCSRSVSRYVAPVSCSWEKTL*CAKPSKTTWTTIQPSRNCCHTSRATLASCSP 319 P+T S SV PV+ S T+ + P +T T + NC TS + L + +P Sbjct: 490 PLTTTNCTTSTSVPYTSTPVTSS-NYTISSSTPVTSTPVT---TTNCT-TSTSVLYTSTP 544 Query: 320 AETSLRSVTNCWRTKSRLQLVPVPLPHCQSSFPPTTP 430 ++ + TNC T + + P+ + +TP Sbjct: 545 VTSTPLATTNC-TTSTSVPYTSTPVTSSNYTISSSTP 580 >SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr 1|||Manual Length = 1822 Score = 26.2 bits (55), Expect = 2.2 Identities = 16/54 (29%), Positives = 26/54 (48%) Frame = -1 Query: 362 LFSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLLSRWSLMALRIIVFFPMST 201 LFSN + R + R+ T L+ GN++ + W+L+A I F +T Sbjct: 1512 LFSNCICRDNITLSRIGTNCMQQLLSGNAYRFE--VKDWNLVADMFIELFKETT 1563 >SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomyces pombe|chr 1|||Manual Length = 421 Score = 25.4 bits (53), Expect = 3.8 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = -1 Query: 431 PVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPR---VNTKPTLPLMCGNSFSRAG 261 PV + + G++ P AGAW L N L T + +NT P PL G FS Sbjct: 142 PVYVPIIPPEEGSVKPVSAGAWKLDMNKLRNAITEKTKMIVINT-PHNPL--GKIFSEEE 198 Query: 260 L 258 L Sbjct: 199 L 199 >SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces pombe|chr 1|||Manual Length = 330 Score = 25.4 bits (53), Expect = 3.8 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = +1 Query: 121 KCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPA 267 K IVGA NVGS + +S + IV++ N +KA + +D N A Sbjct: 22 KIVIVGAGNVGSTTAFTLLLSGLAAEIVIIDLN--KKKAEGEAMDLNHA 68 >SPAC23D3.10c |eng2||endo-1,3-beta-glucanase Eng2|Schizosaccharomyces pombe|chr 1|||Manual Length = 706 Score = 24.2 bits (50), Expect = 8.7 Identities = 9/25 (36%), Positives = 15/25 (60%) Frame = -1 Query: 122 FGYSSKSWMILTK*LDFQVALSSLP 48 F Y++K+W ++ K L QV +P Sbjct: 317 FAYATKTWHLIEKNLPTQVGFLPIP 341 >SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 796 Score = 24.2 bits (50), Expect = 8.7 Identities = 7/21 (33%), Positives = 11/21 (52%) Frame = -3 Query: 303 NVALDVWQQFLEGWIVVQVVF 241 N + W +F +GW + V F Sbjct: 431 NTYIGRWHKFFQGWFITLVTF 451 >SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1087 Score = 24.2 bits (50), Expect = 8.7 Identities = 13/45 (28%), Positives = 23/45 (51%) Frame = -1 Query: 428 VLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLP 294 V +G + +MAP R+G+W +N S + R+ + K +P Sbjct: 226 VFSSGNHAYHASMAPKRSGSWR-HTNFHSTSHPRAASIGNKSGIP 269 >SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 1611 Score = 24.2 bits (50), Expect = 8.7 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = -3 Query: 114 LVQELDDLNEVVRLPSSLVLPTHPG 40 L QE+ L +RLP+ L P++ G Sbjct: 931 LTQEITQLGSNMRLPTKLTRPSNDG 955 >SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizosaccharomyces pombe|chr 2|||Manual Length = 460 Score = 24.2 bits (50), Expect = 8.7 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = -3 Query: 366 DFVLQQFVTDLNEVSAGEH 310 D V+QQ V LN V AG++ Sbjct: 419 DIVIQQVVEQLNHVIAGDY 437 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,025,058 Number of Sequences: 5004 Number of extensions: 40122 Number of successful extensions: 125 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 125 length of database: 2,362,478 effective HSP length: 67 effective length of database: 2,027,210 effective search space used: 154067960 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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