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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30811
         (431 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC18.14c |rpp0||60S acidic ribosomal protein Rpp0 |Schizosacch...   136   1e-33
SPBC11G11.03 |||60S acidic ribosomal protein |Schizosaccharomyce...    54   1e-08
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch...    29   0.31 
SPAC823.13c |||mitochondrial inner membrane protein|Schizosaccha...    27   0.93 
SPAC3H1.04c |mdm31||mitochondrial inner membrane protein Mdm31|S...    27   0.93 
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    27   1.6  
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch...    26   2.2  
SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomy...    25   3.8  
SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces pomb...    25   3.8  
SPAC23D3.10c |eng2||endo-1,3-beta-glucanase Eng2|Schizosaccharom...    24   8.7  
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c...    24   8.7  
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar...    24   8.7  
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    24   8.7  
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos...    24   8.7  

>SPCC18.14c |rpp0||60S acidic ribosomal protein Rpp0
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 312

 Score =  136 bits (330), Expect = 1e-33
 Identities = 62/119 (52%), Positives = 87/119 (73%)
 Frame = +1

Query: 73  KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 252
           K+ YF K+  L ++Y   F+V  DNV SQQM  +R  LRG++ ++MGKNTM+R+A++  +
Sbjct: 8   KAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRRAMRGII 67

Query: 253 DNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 429
           ++ P LE+LLP ++GNVGFVFT  DL EVR+ ++ N + APARP AIAPL V +PA NT
Sbjct: 68  NDMPELERLLPVVRGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDVFVPAGNT 126


>SPBC11G11.03 |||60S acidic ribosomal protein |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 241

 Score = 53.6 bits (123), Expect = 1e-08
 Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 6/143 (4%)
 Frame = +1

Query: 10  KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 189
           K  RS   TL++  ++     K+  F  + Q LD +   +I    N+ +  +++IR   +
Sbjct: 3   KSRRSKVLTLAQTEKKGHEG-KAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWK 61

Query: 190 GSSIVLMGKNTMMRKAI-----KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLL 354
           GS I  MGK  +M KA+     ++H +N   L KLL    G VG +FT     EV     
Sbjct: 62  GSRI-FMGKTKVMAKALGHTPEEEHAENVSKLTKLL---HGAVGLLFTNSKPDEVIG-YF 116

Query: 355 ENKVQAP-ARPGAIAPLSVVIPA 420
           E+ VQ   AR GA+AP + VIPA
Sbjct: 117 ESFVQNDFARAGAVAPFTHVIPA 139


>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 297

 Score = 29.1 bits (62), Expect = 0.31
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 203 CSWEKTL*CAKPSKTTWTTIQPSRNCCHTSRATLAS 310
           CS EKT  C++  K+  T+ +PS  CC   ++T+ +
Sbjct: 264 CSTEKTSCCSQEKKSCCTSEKPS--CCSNGKSTVCA 297


>SPAC823.13c |||mitochondrial inner membrane
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 317

 Score = 27.5 bits (58), Expect = 0.93
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 269 RAGLLSRWSLMALRIIVFFPMSTILEPR 186
           +A     W LM + +++F  +  ILEPR
Sbjct: 162 QASTWGTWGLMGINVVLFVVVQLILEPR 189


>SPAC3H1.04c |mdm31||mitochondrial inner membrane protein
           Mdm31|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 601

 Score = 27.5 bits (58), Expect = 0.93
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -1

Query: 347 LSRTSTRSPRVNTKPTLPLMCGNSFSRAGLLSRWSLMALRII 222
           L +T  +S    + PTLP +   + S +G+LSR + + ++ I
Sbjct: 35  LKQTVLQSSSFKSFPTLPRLAARNISNSGILSRTTPVIIKQI 76


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 25/97 (25%), Positives = 42/97 (43%)
 Frame = +2

Query: 140 PITWARNRCSRSVSRYVAPVSCSWEKTL*CAKPSKTTWTTIQPSRNCCHTSRATLASCSP 319
           P+T      S SV     PV+ S   T+  + P  +T  T   + NC  TS + L + +P
Sbjct: 490 PLTTTNCTTSTSVPYTSTPVTSS-NYTISSSTPVTSTPVT---TTNCT-TSTSVLYTSTP 544

Query: 320 AETSLRSVTNCWRTKSRLQLVPVPLPHCQSSFPPTTP 430
             ++  + TNC  T + +     P+     +   +TP
Sbjct: 545 VTSTPLATTNC-TTSTSVPYTSTPVTSSNYTISSSTP 580


>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1822

 Score = 26.2 bits (55), Expect = 2.2
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = -1

Query: 362  LFSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLLSRWSLMALRIIVFFPMST 201
            LFSN + R +    R+ T     L+ GN++     +  W+L+A   I  F  +T
Sbjct: 1512 LFSNCICRDNITLSRIGTNCMQQLLSGNAYRFE--VKDWNLVADMFIELFKETT 1563


>SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 421

 Score = 25.4 bits (53), Expect = 3.8
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = -1

Query: 431 PVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPR---VNTKPTLPLMCGNSFSRAG 261
           PV    +  + G++ P  AGAW L  N L    T   +   +NT P  PL  G  FS   
Sbjct: 142 PVYVPIIPPEEGSVKPVSAGAWKLDMNKLRNAITEKTKMIVINT-PHNPL--GKIFSEEE 198

Query: 260 L 258
           L
Sbjct: 199 L 199


>SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 330

 Score = 25.4 bits (53), Expect = 3.8
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +1

Query: 121 KCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPA 267
           K  IVGA NVGS     + +S   + IV++  N   +KA  + +D N A
Sbjct: 22  KIVIVGAGNVGSTTAFTLLLSGLAAEIVIIDLN--KKKAEGEAMDLNHA 68


>SPAC23D3.10c |eng2||endo-1,3-beta-glucanase
           Eng2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 706

 Score = 24.2 bits (50), Expect = 8.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 122 FGYSSKSWMILTK*LDFQVALSSLP 48
           F Y++K+W ++ K L  QV    +P
Sbjct: 317 FAYATKTWHLIEKNLPTQVGFLPIP 341


>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 796

 Score = 24.2 bits (50), Expect = 8.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 303 NVALDVWQQFLEGWIVVQVVF 241
           N  +  W +F +GW +  V F
Sbjct: 431 NTYIGRWHKFFQGWFITLVTF 451


>SPAC2F7.03c |pom1||DYRK family protein kinase
           Pom1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1087

 Score = 24.2 bits (50), Expect = 8.7
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -1

Query: 428 VLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLP 294
           V  +G    + +MAP R+G+W   +N  S +  R+  +  K  +P
Sbjct: 226 VFSSGNHAYHASMAPKRSGSWR-HTNFHSTSHPRAASIGNKSGIP 269


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 24.2 bits (50), Expect = 8.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 114  LVQELDDLNEVVRLPSSLVLPTHPG 40
            L QE+  L   +RLP+ L  P++ G
Sbjct: 931  LTQEITQLGSNMRLPTKLTRPSNDG 955


>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score = 24.2 bits (50), Expect = 8.7
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 366 DFVLQQFVTDLNEVSAGEH 310
           D V+QQ V  LN V AG++
Sbjct: 419 DIVIQQVVEQLNHVIAGDY 437


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,025,058
Number of Sequences: 5004
Number of extensions: 40122
Number of successful extensions: 125
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 154067960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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